Miyakogusa Predicted Gene

Lj5g3v1224670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1224670.1 Non Characterized Hit- tr|A5C4C8|A5C4C8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,43.7,5e-19,seg,NULL,CUFF.55066.1
         (131 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g077100.1 | hypothetical protein | HC | chr1:34405679-3440...   180   3e-46
Medtr5g022570.2 | Myb/SANT-like DNA-binding domain protein | HC ...   100   4e-22
Medtr5g022570.1 | Myb/SANT-like DNA-binding domain protein | HC ...   100   4e-22
Medtr1g024830.1 | Myb/SANT-like DNA-binding domain protein | HC ...    91   2e-19

>Medtr1g077100.1 | hypothetical protein | HC |
           chr1:34405679-34404340 | 20130731
          Length = 129

 Score =  180 bits (457), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 97/131 (74%), Positives = 104/131 (79%), Gaps = 6/131 (4%)

Query: 1   MAYVDVDGSSGSGEDLNMLDGHKLHP--VLPXXXXXXXXXXXXANGDAIVDAMLEIAAAS 58
           MAYVD DG+SGSGEDLNMLDGHK  P  V+P            A GD IVDAMLEIAAAS
Sbjct: 1   MAYVDEDGTSGSGEDLNMLDGHKRRPTVVVPSGSGGRKRK---ATGDTIVDAMLEIAAAS 57

Query: 59  KMRASAILKSEDRFSISKCIKVLDELQGVDERAYFLALDLFENSSSAREIFISLKGDKRL 118
           KMRASAILK+ED FSISKCIKVLD+++GVDER YF ALDLFENSSSAREIFIS+K  KRL
Sbjct: 58  KMRASAILKNEDMFSISKCIKVLDKMRGVDERVYFHALDLFENSSSAREIFISIKSGKRL 117

Query: 119 PWLLGKCVGVP 129
           PWL  KC GVP
Sbjct: 118 PWLQCKC-GVP 127


>Medtr5g022570.2 | Myb/SANT-like DNA-binding domain protein | HC |
           chr5:8902588-8900200 | 20130731
          Length = 298

 Score =  100 bits (248), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 1/105 (0%)

Query: 24  LHPVLPXXXXXXXXXXXXANGDAIVDAMLEIAAASKMRASAILKSEDRFSISKCIKVLDE 83
           + P  P                AI DA+LE+A+ASKMRA+AI +   ++SIS CIK LD 
Sbjct: 192 VQPTTPTATCSSRKRGRKGVDGAIADAILEMASASKMRAAAIEQHNSKYSISDCIKDLDL 251

Query: 84  LQGVDERAYFLALDLFENSSSAREIFISLKGDKRLPWLLGKCVGV 128
           ++GVD++ YF ALDLF N+ +AREIF+SLK DKRL WL  +C  V
Sbjct: 252 MEGVDQQLYFAALDLF-NNPNAREIFLSLKKDKRLTWLHHRCAVV 295


>Medtr5g022570.1 | Myb/SANT-like DNA-binding domain protein | HC |
           chr5:8903171-8900130 | 20130731
          Length = 298

 Score =  100 bits (248), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 1/105 (0%)

Query: 24  LHPVLPXXXXXXXXXXXXANGDAIVDAMLEIAAASKMRASAILKSEDRFSISKCIKVLDE 83
           + P  P                AI DA+LE+A+ASKMRA+AI +   ++SIS CIK LD 
Sbjct: 192 VQPTTPTATCSSRKRGRKGVDGAIADAILEMASASKMRAAAIEQHNSKYSISDCIKDLDL 251

Query: 84  LQGVDERAYFLALDLFENSSSAREIFISLKGDKRLPWLLGKCVGV 128
           ++GVD++ YF ALDLF N+ +AREIF+SLK DKRL WL  +C  V
Sbjct: 252 MEGVDQQLYFAALDLF-NNPNAREIFLSLKKDKRLTWLHHRCAVV 295


>Medtr1g024830.1 | Myb/SANT-like DNA-binding domain protein | HC |
           chr1:7921698-7923227 | 20130731
          Length = 350

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/82 (57%), Positives = 61/82 (74%), Gaps = 2/82 (2%)

Query: 45  DAIVDAMLEIAAASKMRASAILKSEDRFSISKCIKVLDELQGVDERAYFLALDLFENSSS 104
           +A+ +AMLE+ +AS++RA     S+D+FSI+ CIK LDE++G+D+  YF ALDLFEN  S
Sbjct: 264 NAMAEAMLEMISASRLRAVVSSVSDDKFSITNCIKALDEIKGIDQNLYFSALDLFEN-PS 322

Query: 105 AREIFISLKGDK-RLPWLLGKC 125
            RE FISLK  K RL WL GKC
Sbjct: 323 FRETFISLKSVKIRLTWLQGKC 344