Miyakogusa Predicted Gene

Lj5g3v1224660.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1224660.1 tr|Q01AC6|Q01AC6_OSTTA WGS project CAID00000000
data, contig chromosome 04 OS=Ostreococcus tauri
GN=,34.69,5e-19,seg,NULL,CUFF.55065.1
         (159 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g077090.2 | histone deacetylation protein Rxt3 | HC | chr1...   236   6e-63
Medtr1g077090.1 | histone deacetylation protein Rxt3 | HC | chr1...   236   6e-63
Medtr6g065070.2 | histone deacetylation protein Rxt3 | HC | chr6...   209   8e-55
Medtr6g065070.1 | histone deacetylation protein Rxt3 | HC | chr6...   209   8e-55

>Medtr1g077090.2 | histone deacetylation protein Rxt3 | HC |
           chr1:34396265-34403627 | 20130731
          Length = 821

 Score =  236 bits (603), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 111/143 (77%), Positives = 119/143 (83%)

Query: 17  VADKGLKKPLYTSARLKKGEVLYLETHKSRYELCFIGEKLVKATPASQLQDPSTDKSHNN 76
           VADKGLKKP YTSARLKKGEVLYLETH +RYELCF GEKLVKATPA+Q  +   +K+ N+
Sbjct: 679 VADKGLKKPQYTSARLKKGEVLYLETHTTRYELCFAGEKLVKATPATQANESGAEKAQNH 738

Query: 77  HPHSANGEKSDGDHVMIDAFRWSRCKKPLPQKLMRTIGIXXXXXXXXXXXXXXDWEDIQW 136
           HPHSANGEKS+ DHVMIDAFRWSRCKKPLPQKLMRTIGI              DWEDIQW
Sbjct: 739 HPHSANGEKSEPDHVMIDAFRWSRCKKPLPQKLMRTIGIPLPLEHVEVLEENLDWEDIQW 798

Query: 137 SQTGVWVAGKEYTLARVHFLSMN 159
           SQTGVW+AGKEYTLARVHFLSMN
Sbjct: 799 SQTGVWIAGKEYTLARVHFLSMN 821


>Medtr1g077090.1 | histone deacetylation protein Rxt3 | HC |
           chr1:34396245-34403627 | 20130731
          Length = 821

 Score =  236 bits (603), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 111/143 (77%), Positives = 119/143 (83%)

Query: 17  VADKGLKKPLYTSARLKKGEVLYLETHKSRYELCFIGEKLVKATPASQLQDPSTDKSHNN 76
           VADKGLKKP YTSARLKKGEVLYLETH +RYELCF GEKLVKATPA+Q  +   +K+ N+
Sbjct: 679 VADKGLKKPQYTSARLKKGEVLYLETHTTRYELCFAGEKLVKATPATQANESGAEKAQNH 738

Query: 77  HPHSANGEKSDGDHVMIDAFRWSRCKKPLPQKLMRTIGIXXXXXXXXXXXXXXDWEDIQW 136
           HPHSANGEKS+ DHVMIDAFRWSRCKKPLPQKLMRTIGI              DWEDIQW
Sbjct: 739 HPHSANGEKSEPDHVMIDAFRWSRCKKPLPQKLMRTIGIPLPLEHVEVLEENLDWEDIQW 798

Query: 137 SQTGVWVAGKEYTLARVHFLSMN 159
           SQTGVW+AGKEYTLARVHFLSMN
Sbjct: 799 SQTGVWIAGKEYTLARVHFLSMN 821


>Medtr6g065070.2 | histone deacetylation protein Rxt3 | HC |
           chr6:24088971-24097484 | 20130731
          Length = 739

 Score =  209 bits (532), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 97/143 (67%), Positives = 109/143 (76%)

Query: 17  VADKGLKKPLYTSARLKKGEVLYLETHKSRYELCFIGEKLVKATPASQLQDPSTDKSHNN 76
           VADKGLK+PLYTSARLKKGEVLYLE+H  RYELCF+GEK+VKA PA QL D    KS N+
Sbjct: 597 VADKGLKRPLYTSARLKKGEVLYLESHSCRYELCFVGEKMVKAIPAIQLHDSDIGKSQNH 656

Query: 77  HPHSANGEKSDGDHVMIDAFRWSRCKKPLPQKLMRTIGIXXXXXXXXXXXXXXDWEDIQW 136
           H HS NGEK D D+V ID FRWSRCKKPLPQ++M T+GI              DWEDI W
Sbjct: 657 HMHSTNGEKVDSDNVTIDVFRWSRCKKPLPQEVMHTVGIPLPLEHVEVLEENIDWEDILW 716

Query: 137 SQTGVWVAGKEYTLARVHFLSMN 159
           SQ GVW+AGKEY L+RVHF+SMN
Sbjct: 717 SQAGVWIAGKEYALSRVHFMSMN 739


>Medtr6g065070.1 | histone deacetylation protein Rxt3 | HC |
           chr6:24088971-24097484 | 20130731
          Length = 739

 Score =  209 bits (532), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 97/143 (67%), Positives = 109/143 (76%)

Query: 17  VADKGLKKPLYTSARLKKGEVLYLETHKSRYELCFIGEKLVKATPASQLQDPSTDKSHNN 76
           VADKGLK+PLYTSARLKKGEVLYLE+H  RYELCF+GEK+VKA PA QL D    KS N+
Sbjct: 597 VADKGLKRPLYTSARLKKGEVLYLESHSCRYELCFVGEKMVKAIPAIQLHDSDIGKSQNH 656

Query: 77  HPHSANGEKSDGDHVMIDAFRWSRCKKPLPQKLMRTIGIXXXXXXXXXXXXXXDWEDIQW 136
           H HS NGEK D D+V ID FRWSRCKKPLPQ++M T+GI              DWEDI W
Sbjct: 657 HMHSTNGEKVDSDNVTIDVFRWSRCKKPLPQEVMHTVGIPLPLEHVEVLEENIDWEDILW 716

Query: 137 SQTGVWVAGKEYTLARVHFLSMN 159
           SQ GVW+AGKEY L+RVHF+SMN
Sbjct: 717 SQAGVWIAGKEYALSRVHFMSMN 739