Miyakogusa Predicted Gene

Lj5g3v1209540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1209540.1 Non Characterized Hit- tr|I3SX59|I3SX59_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.32,0,RmlC-like
cupins,RmlC-like cupin domain; Cupin_3,Domain of unknown function
DUF861, cupin-3; no desc,CUFF.55055.1
         (147 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g076840.1 | RmlC-like cupins superfamily protein | HC | ch...   197   4e-51
Medtr6g060170.2 | RmlC-like cupins superfamily protein | HC | ch...   184   4e-47
Medtr6g060170.1 | RmlC-like cupins superfamily protein | HC | ch...   184   4e-47
Medtr7g099200.1 | RmlC-like cupins superfamily protein | HC | ch...   128   2e-30
Medtr1g069370.1 | RmlC-like cupins superfamily protein | HC | ch...   126   7e-30
Medtr6g059920.1 | RmlC-like cupins superfamily protein | HC | ch...   112   1e-25
Medtr5g005820.1 | RmlC-like cupins superfamily protein | HC | ch...    99   1e-21
Medtr6g060000.1 | ethanolamine utilization protein EutQ | HC | c...    88   3e-18
Medtr6g060090.1 | RmlC-like cupins superfamily protein | HC | ch...    77   6e-15
Medtr1g086000.1 | plastid transcriptionally active protein | HC ...    65   2e-11
Medtr6g060030.1 | RmlC-like cupins superfamily protein, putative...    64   6e-11

>Medtr1g076840.1 | RmlC-like cupins superfamily protein | HC |
           chr1:34299918-34301020 | 20130731
          Length = 132

 Score =  197 bits (500), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 107/147 (72%), Positives = 112/147 (76%), Gaps = 15/147 (10%)

Query: 1   MASICVGALPLNQALLLSQTKNSAATCVTFPSTRGKLGRRSHLVVRAESMSTVIEKQGIK 60
           MAS CVG L  +Q   L+ TK S    VT  ST+    RR   VVRA     V EK GIK
Sbjct: 1   MASSCVGTLFSSQTKHLTATKVS----VTLHSTK----RR---VVRA----AVTEKLGIK 45

Query: 61  IERNPSESKLTQLGVKQWPKWGCPPSKFPWTYDAKETCYLLEGKVKVTPSGANEAVEIAA 120
           IE NP ESKLTQLGV+QWPKWGCPPS FPWTYDA ETCYLLEGKVKVTPSGANEAVEI+A
Sbjct: 46  IESNPPESKLTQLGVRQWPKWGCPPSNFPWTYDATETCYLLEGKVKVTPSGANEAVEISA 105

Query: 121 GDLVVFPKGMSCTWDVSVAVDKHYLFE 147
           GDLVVFPKGMSCTWDVSV VDKHY FE
Sbjct: 106 GDLVVFPKGMSCTWDVSVGVDKHYKFE 132


>Medtr6g060170.2 | RmlC-like cupins superfamily protein | HC |
           chr6:20661566-20657697 | 20130731
          Length = 98

 Score =  184 bits (466), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 84/98 (85%), Positives = 91/98 (92%)

Query: 50  MSTVIEKQGIKIERNPSESKLTQLGVKQWPKWGCPPSKFPWTYDAKETCYLLEGKVKVTP 109
           MS V EK GIKIE+NPSE KLTQLGV+QW KWGCPPSKFPWTYD+KETCYLLEG+VKVTP
Sbjct: 1   MSNVTEKLGIKIEKNPSEEKLTQLGVRQWSKWGCPPSKFPWTYDSKETCYLLEGEVKVTP 60

Query: 110 SGANEAVEIAAGDLVVFPKGMSCTWDVSVAVDKHYLFE 147
           +GANE+VE  AGDLVVFPKGMSCTWDVSVAV+KHYLFE
Sbjct: 61  NGANESVEFGAGDLVVFPKGMSCTWDVSVAVNKHYLFE 98


>Medtr6g060170.1 | RmlC-like cupins superfamily protein | HC |
           chr6:20661461-20657714 | 20130731
          Length = 98

 Score =  184 bits (466), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 84/98 (85%), Positives = 91/98 (92%)

Query: 50  MSTVIEKQGIKIERNPSESKLTQLGVKQWPKWGCPPSKFPWTYDAKETCYLLEGKVKVTP 109
           MS V EK GIKIE+NPSE KLTQLGV+QW KWGCPPSKFPWTYD+KETCYLLEG+VKVTP
Sbjct: 1   MSNVTEKLGIKIEKNPSEEKLTQLGVRQWSKWGCPPSKFPWTYDSKETCYLLEGEVKVTP 60

Query: 110 SGANEAVEIAAGDLVVFPKGMSCTWDVSVAVDKHYLFE 147
           +GANE+VE  AGDLVVFPKGMSCTWDVSVAV+KHYLFE
Sbjct: 61  NGANESVEFGAGDLVVFPKGMSCTWDVSVAVNKHYLFE 98


>Medtr7g099200.1 | RmlC-like cupins superfamily protein | HC |
           chr7:39755766-39756379 | 20130731
          Length = 107

 Score =  128 bits (322), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 57/89 (64%), Positives = 70/89 (78%)

Query: 59  IKIERNPSESKLTQLGVKQWPKWGCPPSKFPWTYDAKETCYLLEGKVKVTPSGANEAVEI 118
           I IERNPS+S+L +L +K WPKWGC P K+   +DA+ETCYLL+GKVK    G+++ VE 
Sbjct: 7   ITIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEF 66

Query: 119 AAGDLVVFPKGMSCTWDVSVAVDKHYLFE 147
            AGDLV  PKG+SCTWDVSVAVDK+Y FE
Sbjct: 67  GAGDLVTIPKGLSCTWDVSVAVDKYYKFE 95


>Medtr1g069370.1 | RmlC-like cupins superfamily protein | HC |
           chr1:29986728-29985854 | 20130731
          Length = 103

 Score =  126 bits (317), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 56/89 (62%), Positives = 68/89 (76%)

Query: 59  IKIERNPSESKLTQLGVKQWPKWGCPPSKFPWTYDAKETCYLLEGKVKVTPSGANEAVEI 118
           I IE NPSE +L +L +K WPKWGC P K+   +DA+ETCYLL+GKVK    G++E VE 
Sbjct: 11  ITIESNPSEPRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSEFVEF 70

Query: 119 AAGDLVVFPKGMSCTWDVSVAVDKHYLFE 147
            AGDLV  PKG+SCTWDVS+AVDK+Y FE
Sbjct: 71  GAGDLVTIPKGLSCTWDVSIAVDKYYKFE 99


>Medtr6g059920.1 | RmlC-like cupins superfamily protein | HC |
           chr6:20577094-20574039 | 20130731
          Length = 130

 Score =  112 bits (280), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/99 (54%), Positives = 70/99 (70%), Gaps = 1/99 (1%)

Query: 46  RAESMSTVIEKQGIKIERNPSESKLTQLGVKQWPKWGCPPSKFPWTYDAKETCYLLEGKV 105
           +  SM+T  E  G+KIE+NPS+SKL +LGV  WPKW   P K PW+++ +ET Y+LEGKV
Sbjct: 28  KETSMATY-EVFGVKIEKNPSQSKLIELGVSTWPKWEGGPLKIPWSFEEEETMYILEGKV 86

Query: 106 KVTPSGANEAVEIAAGDLVVFPKGMSCTWDVSVAVDKHY 144
            VT   +  + EI  G+LVVFPKGM+ TWDV+  V KHY
Sbjct: 87  NVTVEESIGSFEIGGGNLVVFPKGMNITWDVTEPVKKHY 125


>Medtr5g005820.1 | RmlC-like cupins superfamily protein | HC |
           chr5:637106-638673 | 20130731
          Length = 99

 Score = 99.4 bits (246), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 47/86 (54%), Positives = 60/86 (69%)

Query: 58  GIKIERNPSESKLTQLGVKQWPKWGCPPSKFPWTYDAKETCYLLEGKVKVTPSGANEAVE 117
           G+KIE+NPS+SKL +L V  WPKW   P K P ++  +ET YL+EGKVKVT      + E
Sbjct: 8   GVKIEKNPSKSKLIELSVSTWPKWEGGPLKIPRSFKEEETMYLVEGKVKVTVEEKIGSFE 67

Query: 118 IAAGDLVVFPKGMSCTWDVSVAVDKH 143
           I  GDLVVFPKGM+ TW+++  V KH
Sbjct: 68  IGGGDLVVFPKGMTITWEITEPVKKH 93


>Medtr6g060000.1 | ethanolamine utilization protein EutQ | HC |
           chr6:20601533-20600860 | 20130731
          Length = 65

 Score = 87.8 bits (216), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 39/45 (86%), Positives = 41/45 (91%)

Query: 86  SKFPWTYDAKETCYLLEGKVKVTPSGANEAVEIAAGDLVVFPKGM 130
            KFPWTYD+KETCYLLEGKVKVTP+GANE VE  AGDLVVFPKGM
Sbjct: 17  GKFPWTYDSKETCYLLEGKVKVTPNGANELVEFGAGDLVVFPKGM 61


>Medtr6g060090.1 | RmlC-like cupins superfamily protein | HC |
           chr6:20629827-20628722 | 20130731
          Length = 56

 Score = 77.0 bits (188), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 35/50 (70%), Positives = 41/50 (82%), Gaps = 2/50 (4%)

Query: 80  KWGCPPSKFPWTYDAKETCYLLEGKVKVTPSGANEAVEIAAGDLVVFPKG 129
           KWGCPP+KFPWTYD K TCYLLEGKVKVTP+  + +VE + GDL+ F KG
Sbjct: 9   KWGCPPNKFPWTYDFKVTCYLLEGKVKVTPN--SNSVEFSVGDLLCFLKG 56


>Medtr1g086000.1 | plastid transcriptionally active protein | HC |
           chr1:38480907-38478579 | 20130731
          Length = 143

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 42/74 (56%)

Query: 55  EKQGIKIERNPSESKLTQLGVKQWPKWGCPPSKFPWTYDAKETCYLLEGKVKVTPSGANE 114
           E   +K+ER  S  KL QL V +W  W    S+ PW +   +  Y+ EG+V+V P G+  
Sbjct: 45  ELYNVKVERKVSPEKLAQLEVSRWSVWKTGKSRLPWDWQVDQLVYIEEGEVRVVPEGSKR 104

Query: 115 AVEIAAGDLVVFPK 128
            ++  AGDL+ +PK
Sbjct: 105 FMQFVAGDLIRYPK 118


>Medtr6g060030.1 | RmlC-like cupins superfamily protein, putative |
           HC | chr6:20612139-20611457 | 20130731
          Length = 64

 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 33/58 (56%), Positives = 36/58 (62%), Gaps = 18/58 (31%)

Query: 108 TPSGANEAVEIAAGDLVVFPKGMSCT------------------WDVSVAVDKHYLFE 147
           TP+GANE+VE  AGDLVVFPKGMSCT                  WDVSV V+K YLFE
Sbjct: 7   TPNGANESVEFGAGDLVVFPKGMSCTWDQGRSYEFGGSALSDPAWDVSVVVNKRYLFE 64