Miyakogusa Predicted Gene

Lj5g3v1208020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1208020.1 Non Characterized Hit- tr|I3SXY5|I3SXY5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,97.67,2e-16,seg,NULL,CUFF.55020.1
         (101 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g076640.4 | guanine nucleotide-binding protein subunit gam...    57   5e-09
Medtr1g076640.2 | guanine nucleotide-binding protein subunit gam...    56   8e-09
Medtr1g076640.1 | guanine nucleotide-binding protein subunit gam...    55   1e-08
Medtr1g076640.3 | guanine nucleotide-binding protein subunit gam...    54   3e-08
Medtr1g076580.1 | GGL domain protein | HC | chr1:34147455-341500...    54   5e-08
Medtr1g076580.2 | GGL domain protein | HC | chr1:34147232-341503...    53   5e-08

>Medtr1g076640.4 | guanine nucleotide-binding protein subunit
          gamma 2 | HC | chr1:34176397-34179581 | 20130731
          Length = 66

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 3/46 (6%)

Query: 1  MQSGGPESAKPMTHR---THSLSSADTRGKHRVHAELKRTEQEAKF 43
          MQS G ES   +TH+   + SLSS+DTRGKHR+HAELKR EQE ++
Sbjct: 1  MQSDGSESETHITHQRVQSQSLSSSDTRGKHRIHAELKRLEQETRY 46


>Medtr1g076640.2 | guanine nucleotide-binding protein subunit
          gamma 2 | HC | chr1:34176397-34180141 | 20130731
          Length = 81

 Score = 55.8 bits (133), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 3/46 (6%)

Query: 1  MQSGGPESAKPMTHR---THSLSSADTRGKHRVHAELKRTEQEAKF 43
          MQS G ES   +TH+   + SLSS+DTRGKHR+HAELKR EQE ++
Sbjct: 1  MQSDGSESETHITHQRVQSQSLSSSDTRGKHRIHAELKRLEQETRY 46


>Medtr1g076640.1 | guanine nucleotide-binding protein subunit
          gamma 2 | HC | chr1:34176397-34180141 | 20130731
          Length = 108

 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 3/46 (6%)

Query: 1  MQSGGPESAKPMTHR---THSLSSADTRGKHRVHAELKRTEQEAKF 43
          MQS G ES   +TH+   + SLSS+DTRGKHR+HAELKR EQE ++
Sbjct: 1  MQSDGSESETHITHQRVQSQSLSSSDTRGKHRIHAELKRLEQETRY 46


>Medtr1g076640.3 | guanine nucleotide-binding protein subunit
          gamma 2 | HC | chr1:34176365-34179719 | 20130731
          Length = 64

 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/45 (62%), Positives = 34/45 (75%), Gaps = 3/45 (6%)

Query: 1  MQSGGPESAKPMTHR---THSLSSADTRGKHRVHAELKRTEQEAK 42
          MQS G ES   +TH+   + SLSS+DTRGKHR+HAELKR EQE +
Sbjct: 1  MQSDGSESETHITHQRVQSQSLSSSDTRGKHRIHAELKRLEQETR 45


>Medtr1g076580.1 | GGL domain protein | HC |
          chr1:34147455-34150058 | 20130731
          Length = 81

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 3/46 (6%)

Query: 1  MQSGGPESAKPMTHRTHSLS---SADTRGKHRVHAELKRTEQEAKF 43
          MQS G +S  P TH   S S   S+DTRGKHR+HAELKR EQE ++
Sbjct: 1  MQSDGSQSDNPTTHFVQSQSFSTSSDTRGKHRIHAELKRLEQETRY 46


>Medtr1g076580.2 | GGL domain protein | HC |
          chr1:34147232-34150384 | 20130731
          Length = 89

 Score = 53.1 bits (126), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 3/46 (6%)

Query: 1  MQSGGPESAKPMTHRTHSLS---SADTRGKHRVHAELKRTEQEAKF 43
          MQS G +S  P TH   S S   S+DTRGKHR+HAELKR EQE ++
Sbjct: 1  MQSDGSQSDNPTTHFVQSQSFSTSSDTRGKHRIHAELKRLEQETRY 46