Miyakogusa Predicted Gene

Lj5g3v1208010.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1208010.2 tr|B6U329|B6U329_MAIZE AGG2 OS=Zea mays PE=4
SV=1,57.47,1e-18,coiled-coil,NULL; seg,NULL; G-gamma,G-protein
gamma-like domain,CUFF.55019.2
         (106 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g076640.1 | guanine nucleotide-binding protein subunit gam...   111   1e-25
Medtr1g071100.1 | guanine nucleotide-binding protein subunit gam...    86   1e-17
Medtr1g076580.1 | GGL domain protein | HC | chr1:34147455-341500...    77   4e-15
Medtr1g076580.2 | GGL domain protein | HC | chr1:34147232-341503...    76   9e-15
Medtr1g076640.2 | guanine nucleotide-binding protein subunit gam...    75   2e-14
Medtr1g076640.4 | guanine nucleotide-binding protein subunit gam...    53   6e-08
Medtr1g010050.1 | GGL domain protein | HC | chr1:1715277-1714470...    52   2e-07
Medtr1g076640.3 | guanine nucleotide-binding protein subunit gam...    48   2e-06

>Medtr1g076640.1 | guanine nucleotide-binding protein subunit gamma
           2 | HC | chr1:34176397-34180141 | 20130731
          Length = 108

 Score =  111 bits (278), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 71/109 (65%), Gaps = 4/109 (3%)

Query: 1   MQSGGPESAKPMTHR---THSLSSADTRGKHRVHAELKRTXXXXXXXXXXXXXXXXXXXX 57
           MQS G ES   +TH+   + SLSS+DTRGKHR+HAELKR                     
Sbjct: 1   MQSDGSESETHITHQRVQSQSLSSSDTRGKHRIHAELKRLEQETRYLEEELEKLERMDKA 60

Query: 58  STSCKEMISNVEARPDPLLPLTAGPVSPSWDKWFEGPQDSKSCCRCSIL 106
           STSCKE++S+V+ RPDPLLP T GP++  WD+WFEGPQDS+  CRC IL
Sbjct: 61  STSCKELLSSVQTRPDPLLPSTIGPLNRLWDRWFEGPQDSQG-CRCCIL 108


>Medtr1g071100.1 | guanine nucleotide-binding protein subunit gamma
           2 | HC | chr1:31512718-31509135 | 20130731
          Length = 109

 Score = 85.5 bits (210), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 56/104 (53%), Gaps = 1/104 (0%)

Query: 3   SGGPESAKPMTHRTHSLSSADTRGKHRVHAELKRTXXXXXXXXXXXXXXXXXXXXSTSCK 62
           S   E  + +     +  + D RGKHR+ AELKR                     S  CK
Sbjct: 7   SSADEEKETLVVSVSADGATDKRGKHRILAELKRLQQDTKFLQEELDELEKTENVSAICK 66

Query: 63  EMISNVEARPDPLLPLTAGPVSPSWDKWFEGPQDSKSCCRCSIL 106
           E++ N+++RPDPL+P   GPV+  WD+WFEGPQD ++ CRC IL
Sbjct: 67  ELLQNMDSRPDPLIPEVHGPVNLLWDRWFEGPQDPQA-CRCWIL 109


>Medtr1g076580.1 | GGL domain protein | HC |
          chr1:34147455-34150058 | 20130731
          Length = 81

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 46/81 (56%), Gaps = 3/81 (3%)

Query: 1  MQSGGPESAKPMTHRTHSLS---SADTRGKHRVHAELKRTXXXXXXXXXXXXXXXXXXXX 57
          MQS G +S  P TH   S S   S+DTRGKHR+HAELKR                     
Sbjct: 1  MQSDGSQSDNPTTHFVQSQSFSTSSDTRGKHRIHAELKRLEQETRYLEEELEKLERMDKA 60

Query: 58 STSCKEMISNVEARPDPLLPL 78
          S SCKEM+SNVE RPDPLLPL
Sbjct: 61 SASCKEMLSNVEKRPDPLLPL 81


>Medtr1g076580.2 | GGL domain protein | HC |
          chr1:34147232-34150384 | 20130731
          Length = 89

 Score = 75.9 bits (185), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 1  MQSGGPESAKPMTHRTHSLS---SADTRGKHRVHAELKRTXXXXXXXXXXXXXXXXXXXX 57
          MQS G +S  P TH   S S   S+DTRGKHR+HAELKR                     
Sbjct: 1  MQSDGSQSDNPTTHFVQSQSFSTSSDTRGKHRIHAELKRLEQETRYLEEELEKLERMDKA 60

Query: 58 STSCKEMISNVEARPDPLLPL 78
          S SCKEM+SNVE RPDPLLP 
Sbjct: 61 SASCKEMLSNVEKRPDPLLPF 81


>Medtr1g076640.2 | guanine nucleotide-binding protein subunit
          gamma 2 | HC | chr1:34176397-34180141 | 20130731
          Length = 81

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 3/80 (3%)

Query: 1  MQSGGPESAKPMTHR---THSLSSADTRGKHRVHAELKRTXXXXXXXXXXXXXXXXXXXX 57
          MQS G ES   +TH+   + SLSS+DTRGKHR+HAELKR                     
Sbjct: 1  MQSDGSESETHITHQRVQSQSLSSSDTRGKHRIHAELKRLEQETRYLEEELEKLERMDKA 60

Query: 58 STSCKEMISNVEARPDPLLP 77
          STSCKE++S+V+ RPDPLLP
Sbjct: 61 STSCKELLSSVQTRPDPLLP 80


>Medtr1g076640.4 | guanine nucleotide-binding protein subunit
          gamma 2 | HC | chr1:34176397-34179581 | 20130731
          Length = 66

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 3/66 (4%)

Query: 1  MQSGGPESAKPMTHR---THSLSSADTRGKHRVHAELKRTXXXXXXXXXXXXXXXXXXXX 57
          MQS G ES   +TH+   + SLSS+DTRGKHR+HAELKR                     
Sbjct: 1  MQSDGSESETHITHQRVQSQSLSSSDTRGKHRIHAELKRLEQETRYLEEELEKLERMDKA 60

Query: 58 STSCKE 63
          STSCKE
Sbjct: 61 STSCKE 66


>Medtr1g010050.1 | GGL domain protein | HC | chr1:1715277-1714470 |
           20130731
          Length = 125

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 26  GKHRVHAELKRTXXXXXXXXXXXXXXXXXXXXSTSCKEMISNVEARPDPLLPLTAGPVSP 85
           GKHR+ A +                       ST C ++IS+VE+ PDP+LP   G V  
Sbjct: 45  GKHRLQASISNLNNQINILQEELEKLETIGESSTVCNDVISSVESMPDPMLPWIKGTVDA 104

Query: 86  --SWDKWFEGPQDSKSCCR 102
              WD+WF G  +S++  R
Sbjct: 105 GSGWDRWFGGAHNSRNHKR 123


>Medtr1g076640.3 | guanine nucleotide-binding protein subunit
          gamma 2 | HC | chr1:34176365-34179719 | 20130731
          Length = 64

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/39 (64%), Positives = 30/39 (76%), Gaps = 3/39 (7%)

Query: 1  MQSGGPESAKPMTHR---THSLSSADTRGKHRVHAELKR 36
          MQS G ES   +TH+   + SLSS+DTRGKHR+HAELKR
Sbjct: 1  MQSDGSESETHITHQRVQSQSLSSSDTRGKHRIHAELKR 39