Miyakogusa Predicted Gene

Lj5g3v1206650.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1206650.2 tr|B9IQW0|B9IQW0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_915042 PE=4
SV=1,29.67,0.000000000000009,FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.55004.2
         (248 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g076330.3 | ion channel pollux-like protein | HC | chr1:33...   407   e-114
Medtr1g076330.1 | ion channel pollux-like protein | HC | chr1:33...   407   e-114
Medtr1g076330.5 | ion channel pollux-like protein | HC | chr1:33...   407   e-114
Medtr1g076330.4 | ion channel pollux-like protein | HC | chr1:33...   308   3e-84
Medtr1g076330.2 | ion channel pollux-like protein | HC | chr1:33...   308   4e-84
Medtr1g076330.7 | ion channel pollux-like protein | HC | chr1:33...   152   2e-37
Medtr1g076330.6 | ion channel pollux-like protein | HC | chr1:33...   152   2e-37
Medtr7g117580.1 | ion channel castor | HC | chr7:48754006-487449...    60   3e-09
Medtr7g117580.2 | ion channel castor | HC | chr7:48754006-487449...    59   4e-09
Medtr2g005870.1 | ion channel pollux-like protein | HC | chr2:36...    56   4e-08

>Medtr1g076330.3 | ion channel pollux-like protein | HC |
           chr1:33999242-33988878 | 20130731
          Length = 761

 Score =  407 bits (1046), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/248 (81%), Positives = 223/248 (89%), Gaps = 1/248 (0%)

Query: 1   MIQEYDNYLGPGSVLEILSDTPINDRIIRESKISGPNKLKNVRVSHRIGNPMDYDILKET 60
           MIQEY+NYLGPGSVLE+LS+TP+NDRIIRE+ I+G +KLKNVRVSHRIGNPMDY  LKET
Sbjct: 515 MIQEYENYLGPGSVLEVLSETPLNDRIIREN-IAGHSKLKNVRVSHRIGNPMDYGTLKET 573

Query: 61  ILNIQSSLKKEDIPLSIAVIPDRDWLLGDPSKADKLSAFSLLLAENICNQVGVKVHNLVA 120
           ILNIQ+SLKKEDIP SIA I D+DWLLGD SK DKLSA+S+LLAENIC+++GVKV NLVA
Sbjct: 574 ILNIQTSLKKEDIPFSIACISDKDWLLGDTSKTDKLSAYSILLAENICDKLGVKVQNLVA 633

Query: 121 EIVDSKLGKQITRIKPSVTYIAAEEIMSLVTAQVTENSELNEVWKDVLNADGDEIYVKDI 180
           EIVDSKLGKQITRIKPSVTY+AAEEI+SLVTAQV ENSELNEVWKD+L+ADGDEIYVKDI
Sbjct: 634 EIVDSKLGKQITRIKPSVTYVAAEEILSLVTAQVAENSELNEVWKDILDADGDEIYVKDI 693

Query: 181 GLYMKEGENPSFTELSERAYLRREVAIGYXXXXXXXXXXXXXSEPLSLEMTDSLIVISEL 240
            LYMKEGENPSF+ELSERAYLRREVAIGY             SEPLSLE+TDSLIVISEL
Sbjct: 694 SLYMKEGENPSFSELSERAYLRREVAIGYVKKNKNVINPIPKSEPLSLELTDSLIVISEL 753

Query: 241 EGEQPVVL 248
           EGEQPV+L
Sbjct: 754 EGEQPVIL 761


>Medtr1g076330.1 | ion channel pollux-like protein | HC |
           chr1:33999242-33988836 | 20130731
          Length = 855

 Score =  407 bits (1046), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/248 (81%), Positives = 223/248 (89%), Gaps = 1/248 (0%)

Query: 1   MIQEYDNYLGPGSVLEILSDTPINDRIIRESKISGPNKLKNVRVSHRIGNPMDYDILKET 60
           MIQEY+NYLGPGSVLE+LS+TP+NDRIIRE+ I+G +KLKNVRVSHRIGNPMDY  LKET
Sbjct: 609 MIQEYENYLGPGSVLEVLSETPLNDRIIREN-IAGHSKLKNVRVSHRIGNPMDYGTLKET 667

Query: 61  ILNIQSSLKKEDIPLSIAVIPDRDWLLGDPSKADKLSAFSLLLAENICNQVGVKVHNLVA 120
           ILNIQ+SLKKEDIP SIA I D+DWLLGD SK DKLSA+S+LLAENIC+++GVKV NLVA
Sbjct: 668 ILNIQTSLKKEDIPFSIACISDKDWLLGDTSKTDKLSAYSILLAENICDKLGVKVQNLVA 727

Query: 121 EIVDSKLGKQITRIKPSVTYIAAEEIMSLVTAQVTENSELNEVWKDVLNADGDEIYVKDI 180
           EIVDSKLGKQITRIKPSVTY+AAEEI+SLVTAQV ENSELNEVWKD+L+ADGDEIYVKDI
Sbjct: 728 EIVDSKLGKQITRIKPSVTYVAAEEILSLVTAQVAENSELNEVWKDILDADGDEIYVKDI 787

Query: 181 GLYMKEGENPSFTELSERAYLRREVAIGYXXXXXXXXXXXXXSEPLSLEMTDSLIVISEL 240
            LYMKEGENPSF+ELSERAYLRREVAIGY             SEPLSLE+TDSLIVISEL
Sbjct: 788 SLYMKEGENPSFSELSERAYLRREVAIGYVKKNKNVINPIPKSEPLSLELTDSLIVISEL 847

Query: 241 EGEQPVVL 248
           EGEQPV+L
Sbjct: 848 EGEQPVIL 855


>Medtr1g076330.5 | ion channel pollux-like protein | HC |
           chr1:33999174-33988836 | 20130731
          Length = 839

 Score =  407 bits (1045), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/248 (81%), Positives = 223/248 (89%), Gaps = 1/248 (0%)

Query: 1   MIQEYDNYLGPGSVLEILSDTPINDRIIRESKISGPNKLKNVRVSHRIGNPMDYDILKET 60
           MIQEY+NYLGPGSVLE+LS+TP+NDRIIRE+ I+G +KLKNVRVSHRIGNPMDY  LKET
Sbjct: 593 MIQEYENYLGPGSVLEVLSETPLNDRIIREN-IAGHSKLKNVRVSHRIGNPMDYGTLKET 651

Query: 61  ILNIQSSLKKEDIPLSIAVIPDRDWLLGDPSKADKLSAFSLLLAENICNQVGVKVHNLVA 120
           ILNIQ+SLKKEDIP SIA I D+DWLLGD SK DKLSA+S+LLAENIC+++GVKV NLVA
Sbjct: 652 ILNIQTSLKKEDIPFSIACISDKDWLLGDTSKTDKLSAYSILLAENICDKLGVKVQNLVA 711

Query: 121 EIVDSKLGKQITRIKPSVTYIAAEEIMSLVTAQVTENSELNEVWKDVLNADGDEIYVKDI 180
           EIVDSKLGKQITRIKPSVTY+AAEEI+SLVTAQV ENSELNEVWKD+L+ADGDEIYVKDI
Sbjct: 712 EIVDSKLGKQITRIKPSVTYVAAEEILSLVTAQVAENSELNEVWKDILDADGDEIYVKDI 771

Query: 181 GLYMKEGENPSFTELSERAYLRREVAIGYXXXXXXXXXXXXXSEPLSLEMTDSLIVISEL 240
            LYMKEGENPSF+ELSERAYLRREVAIGY             SEPLSLE+TDSLIVISEL
Sbjct: 772 SLYMKEGENPSFSELSERAYLRREVAIGYVKKNKNVINPIPKSEPLSLELTDSLIVISEL 831

Query: 241 EGEQPVVL 248
           EGEQPV+L
Sbjct: 832 EGEQPVIL 839


>Medtr1g076330.4 | ion channel pollux-like protein | HC |
           chr1:33998911-33989041 | 20130731
          Length = 790

 Score =  308 bits (789), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 150/184 (81%), Positives = 170/184 (92%), Gaps = 1/184 (0%)

Query: 1   MIQEYDNYLGPGSVLEILSDTPINDRIIRESKISGPNKLKNVRVSHRIGNPMDYDILKET 60
           MIQEY+NYLGPGSVLE+LS+TP+NDRIIRE+ I+G +KLKNVRVSHRIGNPMDY  LKET
Sbjct: 588 MIQEYENYLGPGSVLEVLSETPLNDRIIREN-IAGHSKLKNVRVSHRIGNPMDYGTLKET 646

Query: 61  ILNIQSSLKKEDIPLSIAVIPDRDWLLGDPSKADKLSAFSLLLAENICNQVGVKVHNLVA 120
           ILNIQ+SLKKEDIP SIA I D+DWLLGD SK DKLSA+S+LLAENIC+++GVKV NLVA
Sbjct: 647 ILNIQTSLKKEDIPFSIACISDKDWLLGDTSKTDKLSAYSILLAENICDKLGVKVQNLVA 706

Query: 121 EIVDSKLGKQITRIKPSVTYIAAEEIMSLVTAQVTENSELNEVWKDVLNADGDEIYVKDI 180
           EIVDSKLGKQITRIKPSVTY+AAEEI+SLVTAQV ENSELNEVWKD+L+ADGDEIYVK I
Sbjct: 707 EIVDSKLGKQITRIKPSVTYVAAEEILSLVTAQVAENSELNEVWKDILDADGDEIYVKVI 766

Query: 181 GLYM 184
             ++
Sbjct: 767 STHV 770


>Medtr1g076330.2 | ion channel pollux-like protein | HC |
           chr1:33999174-33989041 | 20130731
          Length = 811

 Score =  308 bits (788), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 150/184 (81%), Positives = 170/184 (92%), Gaps = 1/184 (0%)

Query: 1   MIQEYDNYLGPGSVLEILSDTPINDRIIRESKISGPNKLKNVRVSHRIGNPMDYDILKET 60
           MIQEY+NYLGPGSVLE+LS+TP+NDRIIRE+ I+G +KLKNVRVSHRIGNPMDY  LKET
Sbjct: 609 MIQEYENYLGPGSVLEVLSETPLNDRIIREN-IAGHSKLKNVRVSHRIGNPMDYGTLKET 667

Query: 61  ILNIQSSLKKEDIPLSIAVIPDRDWLLGDPSKADKLSAFSLLLAENICNQVGVKVHNLVA 120
           ILNIQ+SLKKEDIP SIA I D+DWLLGD SK DKLSA+S+LLAENIC+++GVKV NLVA
Sbjct: 668 ILNIQTSLKKEDIPFSIACISDKDWLLGDTSKTDKLSAYSILLAENICDKLGVKVQNLVA 727

Query: 121 EIVDSKLGKQITRIKPSVTYIAAEEIMSLVTAQVTENSELNEVWKDVLNADGDEIYVKDI 180
           EIVDSKLGKQITRIKPSVTY+AAEEI+SLVTAQV ENSELNEVWKD+L+ADGDEIYVK I
Sbjct: 728 EIVDSKLGKQITRIKPSVTYVAAEEILSLVTAQVAENSELNEVWKDILDADGDEIYVKVI 787

Query: 181 GLYM 184
             ++
Sbjct: 788 STHV 791


>Medtr1g076330.7 | ion channel pollux-like protein | HC |
           chr1:33998877-33990917 | 20130731
          Length = 682

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 74/96 (77%), Positives = 83/96 (86%), Gaps = 1/96 (1%)

Query: 1   MIQEYDNYLGPGSVLEILSDTPINDRIIRESKISGPNKLKNVRVSHRIGNPMDYDILKET 60
           MIQEY+NYLGPGSVLE+LS+TP+NDRIIRE+ I+G +KLKNVRVSHRIGNPMDY  LKET
Sbjct: 588 MIQEYENYLGPGSVLEVLSETPLNDRIIREN-IAGHSKLKNVRVSHRIGNPMDYGTLKET 646

Query: 61  ILNIQSSLKKEDIPLSIAVIPDRDWLLGDPSKADKL 96
           ILNIQ+SLKKEDIP SIA I D+DWLLG      KL
Sbjct: 647 ILNIQTSLKKEDIPFSIACISDKDWLLGGNYAHKKL 682


>Medtr1g076330.6 | ion channel pollux-like protein | HC |
           chr1:33999078-33990917 | 20130731
          Length = 703

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 74/96 (77%), Positives = 83/96 (86%), Gaps = 1/96 (1%)

Query: 1   MIQEYDNYLGPGSVLEILSDTPINDRIIRESKISGPNKLKNVRVSHRIGNPMDYDILKET 60
           MIQEY+NYLGPGSVLE+LS+TP+NDRIIRE+ I+G +KLKNVRVSHRIGNPMDY  LKET
Sbjct: 609 MIQEYENYLGPGSVLEVLSETPLNDRIIREN-IAGHSKLKNVRVSHRIGNPMDYGTLKET 667

Query: 61  ILNIQSSLKKEDIPLSIAVIPDRDWLLGDPSKADKL 96
           ILNIQ+SLKKEDIP SIA I D+DWLLG      KL
Sbjct: 668 ILNIQTSLKKEDIPFSIACISDKDWLLGGNYAHKKL 703


>Medtr7g117580.1 | ion channel castor | HC | chr7:48754006-48744970
           | 20130731
          Length = 824

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 3/126 (2%)

Query: 118 LVAEIVDSKLGKQITRIKPSVTYIAAEEIMSLVTAQVTENSELNEVWKDVLNADGDEIYV 177
           +++EI+D +    ++  K S  Y+ + E++S+  A V E+ ++N V +++    G+E+++
Sbjct: 700 IISEILDPRTKNLLSMSKIS-DYVLSNELVSMALAMVAEDRQINSVLEELFAEQGNEMHI 758

Query: 178 KDIGLYMKEGENPSFTELSERAYLRREVAIGYXXXXXXXXXXX--XXSEPLSLEMTDSLI 235
           +   LY+ E E  SF E+  RA  RRE+ IGY               S+     + D  +
Sbjct: 759 RQADLYLHESEKLSFYEIMLRARQRREILIGYRLANAERAVINPPAKSDKWKWSLKDVFV 818

Query: 236 VISELE 241
           VI+E E
Sbjct: 819 VITEKE 824


>Medtr7g117580.2 | ion channel castor | HC | chr7:48754006-48744970
           | 20130731
          Length = 600

 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 3/126 (2%)

Query: 118 LVAEIVDSKLGKQITRIKPSVTYIAAEEIMSLVTAQVTENSELNEVWKDVLNADGDEIYV 177
           +++EI+D +    ++  K S  Y+ + E++S+  A V E+ ++N V +++    G+E+++
Sbjct: 476 IISEILDPRTKNLLSMSKIS-DYVLSNELVSMALAMVAEDRQINSVLEELFAEQGNEMHI 534

Query: 178 KDIGLYMKEGENPSFTELSERAYLRREVAIGYXXXXXXXXXXX--XXSEPLSLEMTDSLI 235
           +   LY+ E E  SF E+  RA  RRE+ IGY               S+     + D  +
Sbjct: 535 RQADLYLHESEKLSFYEIMLRARQRREILIGYRLANAERAVINPPAKSDKWKWSLKDVFV 594

Query: 236 VISELE 241
           VI+E E
Sbjct: 595 VITEKE 600


>Medtr2g005870.1 | ion channel pollux-like protein | HC |
           chr2:363876-370020 | 20130731
          Length = 882

 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 35/235 (14%)

Query: 1   MIQEYDNYLGPGSVLEILSDTPINDRIIRESKISGPN----KLKNVRVSHRIGNPMDYDI 56
           MI   + +L PGS L + ++ P  +R   E K++        L+N+++ HR GN +    
Sbjct: 623 MIMVLEAFLAPGSELWMFNEVPEKER---ERKLAAGELDVFGLENIKLVHREGNAVIRRH 679

Query: 57  LKETILNIQSS---LKKEDIPLSIA-------------------VIPDRDWLLGDPSKAD 94
           L+   L    S   L  E +  S+A                    +P RD      S + 
Sbjct: 680 LESLPLETFDSILILADESVEDSVAHSDSRSLATLLLIRDIQSRRLPYRD----TKSTSL 735

Query: 95  KLSAFSLLLAENICNQVGVKVHNLVAEIVDSKLGKQITRIKPSVTYIAAEEIMSLVTAQV 154
           +LS FS         Q   K   +++EI+DS+  + +  +     Y+ + E++S+  A V
Sbjct: 736 RLSGFSHNSWIREMQQASDK-SIIISEILDSRT-RNLVSVSRISDYVLSNELVSMALAMV 793

Query: 155 TENSELNEVWKDVLNADGDEIYVKDIGLYMKEGENPSFTELSERAYLRREVAIGY 209
            E+ ++N V +++   +G+E+ +K    Y+ + E   F ++  R   R+E+ IGY
Sbjct: 794 AEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEELCFYDIMIRGRTRKEIVIGY 848