Miyakogusa Predicted Gene

Lj5g3v1201250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1201250.1 Non Characterized Hit- tr|I1KK11|I1KK11_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,85.24,0,coiled-coil,NULL; seg,NULL; Slu7,Pre-mRNA splicing
Prp18-interacting factor; STEP II SPLICING FACTOR,CUFF.54963.1
         (540 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g096940.1 | Pre-mRNA-splicing factor SLU7-like protein | H...   777   0.0  
Medtr1g085510.1 | Pre-mRNA-splicing factor SLU7-like protein | H...   408   e-114
Medtr1g076120.1 | Pre-mRNA-splicing factor SLU7-like protein | L...   153   5e-37

>Medtr7g096940.1 | Pre-mRNA-splicing factor SLU7-like protein | HC |
           chr7:38920000-38925767 | 20130731
          Length = 533

 Score =  777 bits (2007), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/538 (70%), Positives = 416/538 (77%), Gaps = 6/538 (1%)

Query: 1   MATASATFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAEKP 60
           MATAS  FKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAE+P
Sbjct: 1   MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP 60

Query: 61  SLKHQRKWKSDPNYTKSWYDRGAKTFQADNYRKGACENCGAMTHNTKSCVERPRKLGAKW 120
           SLKHQRKWKSDPNYT SWYDRGAKTFQA  YRKGACENCGAMTHN K+C+ERPRK+GAK 
Sbjct: 61  SLKHQRKWKSDPNYTTSWYDRGAKTFQAQKYRKGACENCGAMTHNAKACMERPRKVGAKH 120

Query: 121 TNMHIAPDEKIETFELDYDGKRDRWNGYDPATXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           T+ HIA DEK+ETFELDYDGKRDRWNGYD +T                            
Sbjct: 121 TDKHIAADEKVETFELDYDGKRDRWNGYDASTYARVIERYEARDDARKKFLKEQQLKRLE 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXAHALKVDEAKVDESKQADFAKVEKRVRXXXXXXXXXVR 240
                                    L+VDEAKVDESKQ DFAKVEKRVR         VR
Sbjct: 181 KGDQNDEGAAIDEAEDEDD------LRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVR 234

Query: 241 NLRIREDTAKYLLNLDVNSPYYDPKTHSMREDPLPDADPNEKFYGGDNQYRMSGQALEFK 300
           NLRIREDTAKYLLNLDVNS +YDPKT SMREDPLP+ADPNEKFY GDNQYR SGQALEFK
Sbjct: 235 NLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPEADPNEKFYLGDNQYRSSGQALEFK 294

Query: 301 QLNIHAWEAFEKGQDVHIQAAPSQAELLYKNFKIMKEKLKSQTKDAIIQKYGNAAAQEEL 360
            LNIHAWEAF+KGQDVH+QAAPSQAELLYKNFK+MKEKLKSQTKD II+KYGNAA +++L
Sbjct: 295 DLNIHAWEAFDKGQDVHMQAAPSQAELLYKNFKVMKEKLKSQTKDTIIEKYGNAADEDKL 354

Query: 361 PKELLLGQTERQVEYDRAGRIIKGLEASLPKSKYEEDVYINNHTSIWGSWWNDHQWGYKC 420
           P+ELLLGQ+ERQVEYDRAGRI+KG E ++P+SKYEEDVYINNHT++WGSWW DHQWG+KC
Sbjct: 355 PRELLLGQSERQVEYDRAGRIVKGQEVAIPRSKYEEDVYINNHTTVWGSWWKDHQWGFKC 414

Query: 421 CKQTIRNSYCTXXXXXXXXXXXXDLMKANIDRKVASEDTPAPAEEKRLATWGTDVPDDLV 480
           CKQTIRNSYCT            DLM+ANI RK ++ + P P EEKR ATWGTDVPDD+V
Sbjct: 415 CKQTIRNSYCTGAAGIEAAEAAGDLMRANIARKESAAEDPKPIEEKRPATWGTDVPDDVV 474

Query: 481 LDQKKLDEALXXXXXXXXXXXXXXXXXYNVRWNDEVTPEEMEAYRVKKIHHDDPMKDF 538
           LD+K L +AL                 YNVRWND+VT E+MEAYR+KK+HHDDPMK+F
Sbjct: 475 LDEKLLADALKKEDQRKREEKDERKRKYNVRWNDQVTQEDMEAYRMKKVHHDDPMKNF 532


>Medtr1g085510.1 | Pre-mRNA-splicing factor SLU7-like protein | HC |
           chr1:38191492-38187117 | 20130731
          Length = 387

 Score =  408 bits (1049), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/396 (57%), Positives = 257/396 (64%), Gaps = 24/396 (6%)

Query: 6   ATFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAEKPSLKHQ 65
           ATF+SREDH+KQI+LEEA K+GLAPAE DEDGKEINPHIP+++SS P         LKHQ
Sbjct: 13  ATFRSREDHQKQIQLEEACKSGLAPAEFDEDGKEINPHIPRFISSPPC--------LKHQ 64

Query: 66  RKWKSDPNYTKSWYDRGAKTFQADNYRKGACENCGAMTHNTKSCVERPRKLGAKWTNMHI 125
           RK  S PN T S   R  KTFQA  YRKGACENCGAMTH  K C+ER RK+     +  I
Sbjct: 65  RKRISHPNNTSSRSSRVTKTFQASKYRKGACENCGAMTHVAKECMERARKV-----DKSI 119

Query: 126 APDEKIETFEL---DYDGKRDRWNGYDPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
           A DEK ETFE    DY+ KRDRW G+D +T                              
Sbjct: 120 AADEKKETFETAERDYERKRDRWEGFDVSTYARVVKVYEARDHARMKYLKEQKLKKLEKG 179

Query: 183 XXXXXXXXXXXXXXXXXXXXAHALKVDEAKVDESKQADFAKVEKRVRXXXXXXXXXVRNL 242
                               A   KVDE      KQ DFAKVEKRVR         VRNL
Sbjct: 180 DQNDEGAAIDESEDDLRLDEA---KVDEM-----KQMDFAKVEKRVRTTGGGSRGTVRNL 231

Query: 243 RIREDTAKYLLNLDVNSPYYDPKTHSMREDPLPDADPNEKFYGGDNQYRMSGQALEFKQL 302
           RIREDTAKYLLNLDVNS +YDPKT SMREDPLP++DPNEKFY GDN YR SGQALE K+L
Sbjct: 232 RIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPESDPNEKFYLGDNHYRNSGQALEVKEL 291

Query: 303 NIHAWEAFEKGQDVHIQAAPSQAELLYKNFKIMKEKLKSQTKDAIIQKYGNAAAQEELPK 362
           N +A EAF+KGQDVH+ A PSQ ELL+KNFK+MKEK  SQ K  II+KY   A ++ LP+
Sbjct: 292 NNNAREAFDKGQDVHMLAGPSQVELLHKNFKVMKEKSMSQWKKTIIEKYNYVALKDPLPR 351

Query: 363 ELLLGQTERQVEYDRAGRIIKGLEASLPKSKYEEDV 398
           ELLLGQ+ERQ+ YDRAGRIIKG EA  P+SK EED+
Sbjct: 352 ELLLGQSERQILYDRAGRIIKGEEALFPRSKDEEDI 387


>Medtr1g076120.1 | Pre-mRNA-splicing factor SLU7-like protein | LC |
           chr1:33719947-33716705 | 20130731
          Length = 188

 Score =  153 bits (386), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 68/94 (72%), Positives = 80/94 (85%)

Query: 59  KPSLKHQRKWKSDPNYTKSWYDRGAKTFQADNYRKGACENCGAMTHNTKSCVERPRKLGA 118
           K SLKHQRKWK D +YTKSW+ +GAK FQAD YRKGA E CGA+THN KSC+ERP+++GA
Sbjct: 9   KESLKHQRKWKLDQSYTKSWHHKGAKVFQADKYRKGAYEKCGALTHNAKSCMERPQRIGA 68

Query: 119 KWTNMHIAPDEKIETFELDYDGKRDRWNGYDPAT 152
           +WT+ H+APDEKIETFELDYDG  DR NGY+ AT
Sbjct: 69  RWTSKHVAPDEKIETFELDYDGNLDRSNGYNTAT 102



 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 50/96 (52%), Gaps = 28/96 (29%)

Query: 445 LMKANIDRKVASEDTPAPAEEKRLATWGTDVPDDLVLDQKKLDEALXXXXXXXXXXXXXX 504
           L +  + + V   +TP P EEK+ ATWGTDV     LDQKKL EAL              
Sbjct: 121 LKEQQLKKLVEKNNTPTPLEEKKFATWGTDV-----LDQKKLVEALK------------- 162

Query: 505 XXXYNVRWNDEVTPEEMEAYRVKKIHHDDPMKDFLH 540
                     +V+PEEM A R+K IH DDP+K FLH
Sbjct: 163 ----------KVSPEEMVACRMKMIHRDDPVKAFLH 188