Miyakogusa Predicted Gene
- Lj5g3v1201220.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1201220.1 Non Characterized Hit- tr|D0NFZ7|D0NFZ7_PHYIT
Putative uncharacterized protein OS=Phytophthora
infes,27.46,1e-17,seg,NULL; Ank_2,Ankyrin repeat-containing domain;
zf-C3HC4_3,NULL; no description,Ankyrin repeat-con,CUFF.54968.1
(454 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g476030.1 | E3 ubiquitin-protein ligase XBAT35, putative |... 696 0.0
Medtr1g476030.2 | E3 ubiquitin-protein ligase XBAT35, putative |... 508 e-144
Medtr3g009280.1 | TGB12K interacting protein | HC | chr3:1921217... 64 2e-10
Medtr6g027840.1 | ankyrin repeat RF-like protein, putative | HC ... 58 2e-08
Medtr2g437720.1 | zinc finger, C3HC4 type (RING finger) protein ... 57 4e-08
Medtr7g068580.1 | ubiquitin-protein ligase, putative | HC | chr7... 55 2e-07
Medtr4g117250.1 | zinc finger, C3HC4 type (RING finger) protein ... 54 5e-07
Medtr3g088410.2 | ankyrin domain protein | HC | chr3:40149013-40... 52 1e-06
Medtr3g088410.1 | ankyrin domain protein | HC | chr3:40149013-40... 52 1e-06
Medtr2g022210.1 | zinc finger, C3HC4 type (RING finger) protein ... 50 5e-06
>Medtr1g476030.1 | E3 ubiquitin-protein ligase XBAT35, putative | HC
| chr1:33694006-33687085 | 20130731
Length = 459
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/461 (76%), Positives = 381/461 (82%), Gaps = 9/461 (1%)
Query: 1 MGQGQSKSELLYQQVSYGNSEGIKTLHREGAGLEWMDREGKTPLIVACMNPELCNVAKTL 60
MGQGQSKSELLYQQVSYGNS+GIK LHREGAGLEWMDREGKTPLIVACMNPEL NVAKTL
Sbjct: 1 MGQGQSKSELLYQQVSYGNSDGIKALHREGAGLEWMDREGKTPLIVACMNPELYNVAKTL 60
Query: 61 IELGANVNAYRPGRHAGTPLHHAAKRGLESIVKLLLASGANPLVLNDDCQTALEVARAKG 120
IELGANVNAYRPGRHAG+PLHHAAKRGLESIVKLLL GANPL++NDDCQT LEVARAKG
Sbjct: 61 IELGANVNAYRPGRHAGSPLHHAAKRGLESIVKLLLLHGANPLLMNDDCQTPLEVARAKG 120
Query: 121 HSNVVRAIESHLCLFSGWLREFHGPGFLEVVAPQLVSRKVWVAVLPVGSRNLTRPYKLEL 180
+SNVVR IESH+CLFSGWLREFHGPGFLEVVAP LVSRKVWV VLPVGSR LT PYKLEL
Sbjct: 121 NSNVVRVIESHICLFSGWLREFHGPGFLEVVAPNLVSRKVWVVVLPVGSRVLTTPYKLEL 180
Query: 181 AVYSSLQEAQPRTIIPLWKANLEEPKLHQSDPSVTIADFTSRKRFKFGPASENDRQQLTW 240
AVY+SLQ+A+PRTIIPLWKANLEEPKL QSDPSV I+D T+R R KFGPASENDRQQLTW
Sbjct: 181 AVYASLQDARPRTIIPLWKANLEEPKLRQSDPSVAISDKTTRTRLKFGPASENDRQQLTW 240
Query: 241 FSNACKGIPQANPAFLLSNXXXXXXXXXXXXEDPELAMAINASIQHALQERPTVPDAHPN 300
FSNACKG+PQ +P FL +N EDPELAMAI ASIQHAL ERP+ PDA PN
Sbjct: 241 FSNACKGMPQVSPVFLHNNLPTVPPTAPPDAEDPELAMAIQASIQHALHERPSFPDAQPN 300
Query: 301 IEASSSVSGVDTSKHGFLGTPNPGTNFSESVHEANT-----GVSVSAG-LPSGLDFNPSA 354
EASSS++GV ++ GFLGTPN + S +V NT +VSAG SGLD NPSA
Sbjct: 301 SEASSSINGV-SAVQGFLGTPNINDSESVAVPGGNTQHVQNDDNVSAGHTTSGLDLNPSA 359
Query: 355 PPINDEIPVDGPIHYXXXXXXXXXXXXXXXAVEKLP-EEGQSAGEIGSTCVICLDAPAEG 413
PP D++ +DGP+HY VEKLP EEG++AG GSTCVICLDAPAEG
Sbjct: 360 PPFADDVQLDGPVHYPSIDLSPVDVSSSPL-VEKLPNEEGKTAGGSGSTCVICLDAPAEG 418
Query: 414 ACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQVIKLYRV 454
ACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQ+IKLY V
Sbjct: 419 ACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQIIKLYHV 459
>Medtr1g476030.2 | E3 ubiquitin-protein ligase XBAT35, putative | HC
| chr1:33693222-33687139 | 20130731
Length = 392
Score = 508 bits (1307), Expect = e-144, Method: Compositional matrix adjust.
Identities = 262/371 (70%), Positives = 289/371 (77%), Gaps = 9/371 (2%)
Query: 91 IVKLLLASGANPLVLNDDCQTALEVARAKGHSNVVRAIESHLCLFSGWLREFHGPGFLEV 150
I LL ANPL++NDDCQT LEVARAKG+SNVVR IESH+CLFSGWLREFHGPGFLEV
Sbjct: 24 IWDLLFKFPANPLLMNDDCQTPLEVARAKGNSNVVRVIESHICLFSGWLREFHGPGFLEV 83
Query: 151 VAPQLVSRKVWVAVLPVGSRNLTRPYKLELAVYSSLQEAQPRTIIPLWKANLEEPKLHQS 210
VAP LVSRKVWV VLPVGSR LT PYKLELAVY+SLQ+A+PRTIIPLWKANLEEPKL QS
Sbjct: 84 VAPNLVSRKVWVVVLPVGSRVLTTPYKLELAVYASLQDARPRTIIPLWKANLEEPKLRQS 143
Query: 211 DPSVTIADFTSRKRFKFGPASENDRQQLTWFSNACKGIPQANPAFLLSNXXXXXXXXXXX 270
DPSV I+D T+R R KFGPASENDRQQLTWFSNACKG+PQ +P FL +N
Sbjct: 144 DPSVAISDKTTRTRLKFGPASENDRQQLTWFSNACKGMPQVSPVFLHNNLPTVPPTAPPD 203
Query: 271 XEDPELAMAINASIQHALQERPTVPDAHPNIEASSSVSGVDTSKHGFLGTPNPGTNFSES 330
EDPELAMAI ASIQHAL ERP+ PDA PN EASSS++GV ++ GFLGTPN + S +
Sbjct: 204 AEDPELAMAIQASIQHALHERPSFPDAQPNSEASSSINGV-SAVQGFLGTPNINDSESVA 262
Query: 331 VHEANT-----GVSVSAG-LPSGLDFNPSAPPINDEIPVDGPIHYXXXXXXXXXXXXXXX 384
V NT +VSAG SGLD NPSAPP D++ +DGP+HY
Sbjct: 263 VPGGNTQHVQNDDNVSAGHTTSGLDLNPSAPPFADDVQLDGPVHYPSIDLSPVDVSSSPL 322
Query: 385 AVEKLP-EEGQSAGEIGSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRA 443
VEKLP EEG++AG GSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRA
Sbjct: 323 -VEKLPNEEGKTAGGSGSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRA 381
Query: 444 KIDQVIKLYRV 454
KIDQ+IKLY V
Sbjct: 382 KIDQIIKLYHV 392
>Medtr3g009280.1 | TGB12K interacting protein | HC |
chr3:1921217-1926182 | 20130731
Length = 348
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Query: 4 GQSKSELLYQQVSYGNSEGIKTLHREGAGLEWMDREGKTPLIVACMNPELCNVAKTLIEL 63
G +++ S G+ EG+K GA + D EG+T L AC E+ A+ L+E
Sbjct: 221 GTEDESIVHHTASVGDIEGLKAALASGADKDEEDSEGRTALHFACGYGEV-KCAQALLEA 279
Query: 64 GANVNAYRPGRHAGTPLHHAAKRGLESIVKLLLASGANPLVLNDDCQTALEVARAKGHSN 123
GA V+A ++ T LH+AA G + V LLL +GA + N D +T ++VA+ +
Sbjct: 280 GAKVDALDKNKN--TALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNNQDD 337
Query: 124 VVRAIESHLCL 134
V++ +E + L
Sbjct: 338 VLQLLEKDVFL 348
>Medtr6g027840.1 | ankyrin repeat RF-like protein, putative | HC |
chr6:9767853-9770137 | 20130731
Length = 541
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 18 GNSEGIKTLHREGAGLEWMDREGKTPLIVACMNPELCNVAKTLIELGANVNAYRPGRHAG 77
G+ E ++ L +GA ++ + ++G T L +A + + + A+ L+ GA + R R
Sbjct: 254 GHMEILRLLLLKGARVDSLTKDGNTSLHLA-VEEKRRDCARLLLANGARTDV-RNMREGD 311
Query: 78 TPLHHAAKRGLESIVKLLLASGANPLVLNDDCQTALEVARAKGHSNVVRAIE--SHLC 133
TPLH AA G E++VKLLL GA V N +TA +VA GHS + A+ +LC
Sbjct: 312 TPLHIAAANGDENMVKLLLHKGATKYVRNKLGKTAFDVAAENGHSRLFDALRLGDNLC 369
>Medtr2g437720.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:14865351-14860695 | 20130731
Length = 915
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 391 EEGQSAGEIGS--TCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQV 448
EE +S + G C IC + + CGH+ C+ C N+++ CP+CRA ID V
Sbjct: 849 EEKKSHNKTGKKGNCCICNEMKVDSVLYRCGHMCACLKCANDLRWNNGKCPICRANIDDV 908
Query: 449 IKLY 452
+++Y
Sbjct: 909 VRVY 912
>Medtr7g068580.1 | ubiquitin-protein ligase, putative | HC |
chr7:25129211-25135611 | 20130731
Length = 447
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 388 KLPEEGQSAGEIGSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQ 447
K+ +G+++ C IC DAP + +PCGH C +C + + CPVCR + +
Sbjct: 381 KILGDGETSNNTQRLCAICFDAPRDCFFLPCGHCVACFACGSRIAEAAGICPVCRRNMKK 440
Query: 448 VIKLYRV 454
V +++ V
Sbjct: 441 VRRIFTV 447
>Medtr4g117250.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:48587547-48585269 | 20130731
Length = 358
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 400 GSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQVIKL 451
G CVIC+ P + A +PC H+ C C ++ + CP+CR I+Q+I++
Sbjct: 300 GKECVICMTEPKDTAVLPCRHMCMCGECAKALRVQSNNCPICRQPIEQLIEI 351
>Medtr3g088410.2 | ankyrin domain protein | HC |
chr3:40149013-40148549 | 20130731
Length = 154
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 9 ELLYQQVSYGNSEGIKTLHREGAGLEWMDREGKTPLIVACMNPELCNVAKTLIELGANVN 68
E L + Y + + + +L G L D +G+T L +A N + N+ + LI GA++N
Sbjct: 22 EALLEAARYDDMDDVVSLTSNGVPLNSKDDQGRTALHMAAANGHV-NIVEYLISKGADLN 80
Query: 69 AYRPGRHAGTPLHHAAKRGLESIVKLLLASGANPLVLNDDCQTALEVARAKGHSNVVRAI 128
+ ++ TPLH A G +VK L+ +GAN VLN +T ++ A +G V+ AI
Sbjct: 81 SENVEKN--TPLHWACLNGHVEVVKKLIIAGANVSVLNSYERTPMDEAVTRGKLEVMDAI 138
>Medtr3g088410.1 | ankyrin domain protein | HC |
chr3:40149013-40148549 | 20130731
Length = 154
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 9 ELLYQQVSYGNSEGIKTLHREGAGLEWMDREGKTPLIVACMNPELCNVAKTLIELGANVN 68
E L + Y + + + +L G L D +G+T L +A N + N+ + LI GA++N
Sbjct: 22 EALLEAARYDDMDDVVSLTSNGVPLNSKDDQGRTALHMAAANGHV-NIVEYLISKGADLN 80
Query: 69 AYRPGRHAGTPLHHAAKRGLESIVKLLLASGANPLVLNDDCQTALEVARAKGHSNVVRAI 128
+ ++ TPLH A G +VK L+ +GAN VLN +T ++ A +G V+ AI
Sbjct: 81 SENVEKN--TPLHWACLNGHVEVVKKLIIAGANVSVLNSYERTPMDEAVTRGKLEVMDAI 138
>Medtr2g022210.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:7631733-7637979 | 20130731
Length = 386
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 393 GQSAGEIGSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQVIKL 451
G + G CVIC+ P + A +PC H+ C C ++ + CP+CR I++++++
Sbjct: 321 GFDDSDPGKECVICMTEPKDTAVLPCRHMCLCSECAKALRLQSNKCPICRQPIEELMEI 379