Miyakogusa Predicted Gene
- Lj5g3v1201210.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1201210.1 Non Characterized Hit- tr|I3T6A8|I3T6A8_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,68.92,3e-18,seg,NULL; DUF640,Domain of unknown function DUF640;
FAMILY NOT NAMED,NULL,CUFF.54959.1
(155 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g075990.1 | DUF640 family protein | HC | chr1:33672489-336... 73 8e-14
Medtr1g442860.1 | G1-like protein | HC | chr1:15969985-15970629 ... 72 1e-13
Medtr1g069825.1 | G1-like protein | HC | chr1:30504897-30503357 ... 72 2e-13
Medtr7g097030.2 | G1-like protein | HC | chr7:38979364-38981430 ... 72 3e-13
Medtr7g097030.1 | G1-like protein | HC | chr7:38979466-38981430 ... 72 3e-13
Medtr4g094428.1 | G1-like protein | HC | chr4:37973932-37975541 ... 72 3e-13
Medtr1g114020.1 | DUF640 family protein | LC | chr1:51438670-514... 67 9e-12
Medtr1g080210.1 | light-dependent short hypocotyls protein | HC ... 65 3e-11
Medtr5g072510.1 | DUF640 family protein | HC | chr5:30863762-308... 65 4e-11
Medtr3g031830.1 | DUF640 family protein | HC | chr3:26584580-265... 65 4e-11
Medtr2g076400.1 | DUF640 family protein | HC | chr2:32002605-319... 59 2e-09
Medtr2g016110.2 | DUF640 family protein | HC | chr2:4862736-4867... 57 1e-08
Medtr2g016110.1 | DUF640 family protein | HC | chr2:4862701-4867... 57 1e-08
Medtr4g079930.1 | DUF640 family protein | HC | chr4:30941651-309... 55 2e-08
Medtr7g115700.1 | light-dependent short hypocotyls protein | HC ... 55 3e-08
Medtr2g092950.1 | DUF640 family protein | HC | chr2:39556136-395... 54 5e-08
>Medtr1g075990.1 | DUF640 family protein | HC |
chr1:33672489-33671080 | 20130731
Length = 197
Score = 73.2 bits (178), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 31/32 (96%), Positives = 32/32 (100%)
Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCSGA 86
RYENQKRRDWNTFGQYLRNHRPPL+LSRCSGA
Sbjct: 53 RYENQKRRDWNTFGQYLRNHRPPLSLSRCSGA 84
>Medtr1g442860.1 | G1-like protein | HC | chr1:15969985-15970629 |
20130731
Length = 214
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/32 (96%), Positives = 32/32 (100%)
Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCSGA 86
RYENQKRRDWNTFGQYLRNHRPPL+LSRCSGA
Sbjct: 65 RYENQKRRDWNTFGQYLRNHRPPLSLSRCSGA 96
>Medtr1g069825.1 | G1-like protein | HC | chr1:30504897-30503357 |
20130731
Length = 222
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 32/32 (100%)
Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCSGA 86
RYENQKRRDWNTFGQYL+NHRPPL+LSRCSGA
Sbjct: 52 RYENQKRRDWNTFGQYLKNHRPPLSLSRCSGA 83
>Medtr7g097030.2 | G1-like protein | HC | chr7:38979364-38981430 |
20130731
Length = 214
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 32/32 (100%)
Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCSGA 86
RYENQKRRDWNTFGQYL+NHRPPL+LSRCSGA
Sbjct: 64 RYENQKRRDWNTFGQYLKNHRPPLSLSRCSGA 95
>Medtr7g097030.1 | G1-like protein | HC | chr7:38979466-38981430 |
20130731
Length = 214
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 32/32 (100%)
Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCSGA 86
RYENQKRRDWNTFGQYL+NHRPPL+LSRCSGA
Sbjct: 64 RYENQKRRDWNTFGQYLKNHRPPLSLSRCSGA 95
>Medtr4g094428.1 | G1-like protein | HC | chr4:37973932-37975541 |
20130731
Length = 234
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/32 (93%), Positives = 32/32 (100%)
Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCSGA 86
RYE+QKRRDWNTFGQYL+NHRPPLTLSRCSGA
Sbjct: 46 RYESQKRRDWNTFGQYLKNHRPPLTLSRCSGA 77
>Medtr1g114020.1 | DUF640 family protein | LC |
chr1:51438670-51440377 | 20130731
Length = 177
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 30/32 (93%)
Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCSGA 86
RYENQKRRDWNTF QYL+NHRPPL+LS C+GA
Sbjct: 71 RYENQKRRDWNTFVQYLKNHRPPLSLSLCTGA 102
>Medtr1g080210.1 | light-dependent short hypocotyls protein | HC |
chr1:35607822-35609699 | 20130731
Length = 182
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 30/32 (93%)
Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCSGA 86
RYENQKRRDWNTF QYLRNHRPPL+L+ CSG+
Sbjct: 40 RYENQKRRDWNTFCQYLRNHRPPLSLALCSGS 71
>Medtr5g072510.1 | DUF640 family protein | HC |
chr5:30863762-30865232 | 20130731
Length = 225
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 30/32 (93%)
Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCSGA 86
RYE+QKRRDWNTF QYLRNH+PPLTL+ CSGA
Sbjct: 37 RYESQKRRDWNTFQQYLRNHKPPLTLALCSGA 68
>Medtr3g031830.1 | DUF640 family protein | HC |
chr3:26584580-26586158 | 20130731
Length = 223
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/32 (84%), Positives = 30/32 (93%)
Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCSGA 86
RYE+QKRRDWNTF QYL+NH+PPLTL RCSGA
Sbjct: 42 RYESQKRRDWNTFLQYLQNHKPPLTLVRCSGA 73
>Medtr2g076400.1 | DUF640 family protein | HC |
chr2:32002605-31999823 | 20130731
Length = 178
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 26/29 (89%)
Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRC 83
RYE+QKRRDWNTFGQYLRN RPP+ LS C
Sbjct: 33 RYESQKRRDWNTFGQYLRNQRPPVALSNC 61
>Medtr2g016110.2 | DUF640 family protein | HC |
chr2:4862736-4867366 | 20130731
Length = 184
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 27/29 (93%)
Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRC 83
RYE+QK+RDWNTFGQYLRN PP++LS+C
Sbjct: 35 RYESQKKRDWNTFGQYLRNQSPPVSLSQC 63
>Medtr2g016110.1 | DUF640 family protein | HC |
chr2:4862701-4867406 | 20130731
Length = 184
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 27/29 (93%)
Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRC 83
RYE+QK+RDWNTFGQYLRN PP++LS+C
Sbjct: 35 RYESQKKRDWNTFGQYLRNQSPPVSLSQC 63
>Medtr4g079930.1 | DUF640 family protein | HC |
chr4:30941651-30951885 | 20130731
Length = 176
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 26/29 (89%)
Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRC 83
RYE+QKRRDWNTFGQYL N RPP+ LS+C
Sbjct: 29 RYESQKRRDWNTFGQYLNNMRPPVPLSQC 57
>Medtr7g115700.1 | light-dependent short hypocotyls protein | HC |
chr7:47835405-47837009 | 20130731
Length = 170
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 28/32 (87%), Gaps = 1/32 (3%)
Query: 55 RYENQKRRDWNTFGQYLRNHRP-PLTLSRCSG 85
RYE+QKRRDWNTF QYLRNHRP PL+ S C+G
Sbjct: 27 RYESQKRRDWNTFCQYLRNHRPVPLSASMCNG 58
>Medtr2g092950.1 | DUF640 family protein | HC |
chr2:39556136-39560514 | 20130731
Length = 167
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 25/29 (86%)
Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRC 83
RYE+QKRRDWNTFGQYL N RPP+ LS C
Sbjct: 23 RYESQKRRDWNTFGQYLNNLRPPVPLSHC 51