Miyakogusa Predicted Gene

Lj5g3v1174480.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1174480.1 tr|F6KKF6|F6KKF6_MALDO Transcriptional regulator
superman OS=Malus domestica GN=SUP5a PE=2
SV=1,38.46,1e-18,ZINC_FINGER_C2H2_1,Zinc finger, C2H2;
ZINC_FINGER_C2H2_2,Zinc finger, C2H2; SUBFAMILY NOT
NAMED,NULL,gene.g61317.t1.1
         (182 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g044225.1 | transcriptional regulator superman protein | H...   124   6e-29
Medtr1g075430.1 | transcriptional regulator superman protein | H...   113   9e-26
Medtr4g064873.1 | transcriptional regulator superman protein | H...    78   5e-15
Medtr7g063220.1 | C2H2 and C2HC zinc finger protein | HC | chr7:...    74   6e-14
Medtr1g070250.1 | transcriptional regulator superman protein | H...    72   3e-13
Medtr5g014400.1 | palmate-like pentafoliata 1 transcription fact...    65   4e-11
Medtr4g021270.1 | transcriptional regulator superman protein | H...    62   2e-10
Medtr5g080660.1 | transcriptional regulator superman protein | L...    61   5e-10
Medtr3g068095.1 | transcriptional regulator superman protein | H...    61   7e-10
Medtr2g076060.1 | C2H2 type zinc finger transcription factor fam...    60   1e-09
Medtr1g070265.1 | C2H2-type zinc finger protein | LC | chr1:3097...    60   1e-09
Medtr7g026977.1 | zinc finger-like protein | LC | chr7:9012595-9...    58   6e-09
Medtr1g013130.1 | zinc finger-like protein | HC | chr1:2867657-2...    54   9e-08
Medtr3g011990.1 | zinc finger-like protein | LC | chr3:3157305-3...    53   2e-07
Medtr8g466760.1 | zinc finger-like protein | LC | chr8:23851851-...    50   8e-07
Medtr5g008280.1 | zinc finger-like protein | LC | chr5:1724313-1...    50   9e-07
Medtr3g012010.1 | zinc finger-like protein, putative | HC | chr3...    50   1e-06
Medtr5g008390.1 | C2H2 and C2HC zinc finger protein | HC | chr5:...    50   2e-06
Medtr3g011970.1 | zinc finger-like protein | HC | chr3:3139591-3...    49   3e-06
Medtr1g033340.1 | zinc finger-like protein | HC | chr1:11995588-...    49   3e-06
Medtr5g008310.1 | zinc finger-like protein | HC | chr5:1738824-1...    48   5e-06

>Medtr1g044225.1 | transcriptional regulator superman protein | HC |
           chr1:16708226-16707542 | 20130731
          Length = 165

 Score =  124 bits (310), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/184 (44%), Positives = 99/184 (53%), Gaps = 34/184 (18%)

Query: 5   VSGEDHHGDHQNEDTAGTKRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQ-TPNP 63
            S ED       ++   TKRSYDCTFCKRGFTNA+ALGGHMNIHRK+R   K +Q TPN 
Sbjct: 7   TSSEDSDEQEVQDECIVTKRSYDCTFCKRGFTNARALGGHMNIHRKERTTYKAKQGTPN- 65

Query: 64  FSSIQGKFTNYEQSYSSMTLPFT-SEFQNKPLSHYSIREPQRNRDMYFHPP---PTQLAP 119
                             + PF  +   ++P ++Y I EP RN DMY       P    P
Sbjct: 66  ------------------SSPFVPAVVSSQPSTYYCILEPPRNYDMYHQTSKTNPRNSPP 107

Query: 120 LHLCEFQNKKSDQPVHFNQGFWGADLSLQTGSNHVGHNASQVRRGNQKDSE-VDLELRLG 178
               +F N  S       Q   G +LSLQ GS+H G++  QV RG +KD E VDLELRLG
Sbjct: 108 TFQYDFLNTSS-------QSLLGTNLSLQIGSSHKGND--QVWRGIEKDGEGVDLELRLG 158

Query: 179 HDPY 182
           HD Y
Sbjct: 159 HDSY 162


>Medtr1g075430.1 | transcriptional regulator superman protein | HC |
           chr1:33406305-33406881 | 20130731
          Length = 191

 Score =  113 bits (283), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 83/178 (46%), Positives = 101/178 (56%), Gaps = 24/178 (13%)

Query: 21  GTKRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQTPNPFSSIQGK--FTNYEQSY 78
           G +RSY+CTFCKRGFTNAQALGGHMNIHRKDRAK  ++  PN  SS  G   +TN E   
Sbjct: 15  GKRRSYECTFCKRGFTNAQALGGHMNIHRKDRAKASKQ--PNSSSSQIGTKFYTNDE--- 69

Query: 79  SSMTLPFTSE-------FQNKPLSHYSIREPQRNR---DMYFHPPPTQLAPLHLCEF-QN 127
            +M  PF SE       +Q   +  YS  +P+         +H    Q + +H   + Q 
Sbjct: 70  -TMVFPFASEQNSFIGNYQPSNMHGYSYEQPRSYEYPTAPNYHVGNYQTSNVHGFSYDQQ 128

Query: 128 KKSDQP-VHFNQGFWGADLSLQTGSN--HVGHNASQ-VRRGN-QKDSEVDLELRLGHD 180
             S+ P  H NQ   G DLSLQ GS   +V     Q +RRGN Q+D EVDLELRLG D
Sbjct: 129 GSSNWPNFHLNQELQGPDLSLQIGSTQHYVDDTHHQRIRRGNDQEDIEVDLELRLGQD 186


>Medtr4g064873.1 | transcriptional regulator superman protein | HC |
           chr4:24223803-24223252 | 20130731
          Length = 173

 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 82/179 (45%), Gaps = 29/179 (16%)

Query: 9   DHHGDHQNEDTAGTKRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQTPNPFSSIQ 68
           D  GD Q+       RSY+C FCKRGF+NAQALGGHMNIHRKD+AK KQ+ +        
Sbjct: 7   DKGGDDQDAKQVN-PRSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQSS-------- 57

Query: 69  GKFTNYEQSYSSMTLPFTSEFQNKPLSH-----YSIREPQRNRDMYFHPPPTQLAPLHLC 123
              TNY+    S     +SE  NK L +      S + P R  ++       QL      
Sbjct: 58  ---TNYQTQLPSNLEGSSSEDLNKLLPNLNTNIVSQQAPSRGDEILVTQVRQQLPLFAES 114

Query: 124 EFQNKKSDQPVHFNQGFWGADLSLQTGSNHVGHNASQVRRGNQKDSEVDLELRLGHDPY 182
             +N+    P    QG        Q     +    + +       SE+DLELRLG +P+
Sbjct: 115 PTRNETQINP----QG--------QVQREIITTQEALLLSAQDSSSELDLELRLGPEPH 161


>Medtr7g063220.1 | C2H2 and C2HC zinc finger protein | HC |
          chr7:23011049-23010633 | 20130731
          Length = 138

 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 38/50 (76%)

Query: 18 DTAGTKRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQTPNPFSSI 67
          D  G  RSY CTFCKRGF+NAQALGGHMNIHR+DRAK KQ+ +     S+
Sbjct: 18 DDPGQVRSYSCTFCKRGFSNAQALGGHMNIHRRDRAKLKQQSSEENLLSL 67


>Medtr1g070250.1 | transcriptional regulator superman protein | HC |
           chr1:30957093-30955961 | 20130731
          Length = 191

 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 77/174 (44%), Gaps = 30/174 (17%)

Query: 21  GTKRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQTPNPF-----SSIQGKFTNYE 75
           G  RSY+C FCKRGFT AQALGGHMNIHRKDRA   +  T   F     S +     NY 
Sbjct: 35  GIGRSYECVFCKRGFTTAQALGGHMNIHRKDRANNNKSATKTNFAPPSSSKLVVDHDNYG 94

Query: 76  QS--YSSMT---LPFTSEFQNKPLSHYSIREPQRNRDMYFHPPPTQLAPLHLCEFQNKKS 130
               YS++    L     + +   +  +      N    + P   Q + +   E      
Sbjct: 95  DLGFYSTINPSHLARGGYYSSISSTTTTPEVDSLNYHQIYFPSHVQYSEMLCVE------ 148

Query: 131 DQPVHFNQGFWGAD---LSLQTGSNHVGHNASQVRRGNQKDSEVDLELRLGHDP 181
                 NQ  +G D   LSL T       N  ++   N+   E+DLELRLGH P
Sbjct: 149 ------NQRMFGQDWRGLSLYTNP----LNKDKIENNNEV-GELDLELRLGHYP 191


>Medtr5g014400.1 | palmate-like pentafoliata 1 transcription factor
           | HC | chr5:4830733-4831488 | 20130731
          Length = 251

 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 27/44 (61%), Positives = 33/44 (75%)

Query: 18  DTAGTKRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQTP 61
           +T    RSY CTFC+R F +AQALGGHMN+HR+DRA+  Q Q P
Sbjct: 74  NTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQTQPP 117


>Medtr4g021270.1 | transcriptional regulator superman protein | HC
          | chr4:6890129-6888889 | 20130731
          Length = 336

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/35 (71%), Positives = 31/35 (88%)

Query: 24 RSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQE 58
          RSY C+FC+R F +AQALGGHMN+HRKDRA+ KQ+
Sbjct: 59 RSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQQ 93


>Medtr5g080660.1 | transcriptional regulator superman protein | LC
          | chr5:34522376-34523245 | 20130731
          Length = 234

 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 26/38 (68%), Positives = 30/38 (78%)

Query: 24 RSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQTP 61
          R Y C FCKR F +AQALGGHMNIHR+DRA+ KQ  +P
Sbjct: 47 RFYSCNFCKREFRSAQALGGHMNIHRRDRARLKQNLSP 84


>Medtr3g068095.1 | transcriptional regulator superman protein | HC
          | chr3:30727183-30725842 | 20130731
          Length = 260

 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/34 (76%), Positives = 29/34 (85%)

Query: 24 RSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQ 57
          RSY C FCKR F +AQALGGHMN+HR+DRAK KQ
Sbjct: 55 RSYSCHFCKREFRSAQALGGHMNVHRRDRAKLKQ 88


>Medtr2g076060.1 | C2H2 type zinc finger transcription factor
          family protein | HC | chr2:31844759-31844082 | 20130731
          Length = 225

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 23/38 (60%), Positives = 31/38 (81%)

Query: 24 RSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQTP 61
          RSY C+FC++ F +AQALGGHMN+HR+DRA+ +Q   P
Sbjct: 50 RSYTCSFCRKEFKSAQALGGHMNVHRRDRARLRQSSPP 87


>Medtr1g070265.1 | C2H2-type zinc finger protein | LC |
          chr1:30978693-30978130 | 20130731
          Length = 187

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 39/66 (59%)

Query: 19 TAGTKRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQTPNPFSSIQGKFTNYEQSY 78
          T+   R+Y C+FCKR F +AQALGGHMN+HR+DRA+ +     +  +S Q    N     
Sbjct: 30 TSWPARNYSCSFCKREFRSAQALGGHMNVHRRDRARLRSSLISSWVNSDQCPNNNKPNPT 89

Query: 79 SSMTLP 84
           S T P
Sbjct: 90 PSSTTP 95


>Medtr7g026977.1 | zinc finger-like protein | LC |
           chr7:9012595-9011525 | 20130731
          Length = 356

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 32/46 (69%)

Query: 14  HQNEDTAGTKRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQ 59
           H+N +  G  RS+ CT+CK  F+ AQALGGH N HRK+RA  KQ Q
Sbjct: 138 HKNNEGKGDSRSFSCTYCKAKFSTAQALGGHQNAHRKERAFEKQCQ 183


>Medtr1g013130.1 | zinc finger-like protein | HC |
           chr1:2867657-2866484 | 20130731
          Length = 262

 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 10/98 (10%)

Query: 15  QNEDTAGT-KRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQ-----EQTPNPFSSIQ 68
           QN +T    +R + C +C R F ++QALGGH N H+++R+  K+      Q     S+  
Sbjct: 84  QNNNTLDVEQRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRGQRFGTQIIASASAFG 143

Query: 69  GKFTNYEQSYSSM-TLPFTSEFQNKPL---SHYSIREP 102
               + +QSY++M +LP    F NKPL   +H  I +P
Sbjct: 144 FPILHNKQSYANMASLPLYGAFGNKPLGIQAHSMIHKP 181


>Medtr3g011990.1 | zinc finger-like protein | LC |
           chr3:3157305-3156415 | 20130731
          Length = 296

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 30/44 (68%)

Query: 16  NEDTAGTKRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQ 59
           NE+     RS+ C+FCKR F+ +QALGGH N H+ +RA  KQ +
Sbjct: 90  NEEKNSDSRSFSCSFCKRQFSTSQALGGHQNAHKAERALEKQRK 133


>Medtr8g466760.1 | zinc finger-like protein | LC |
           chr8:23851851-23852744 | 20130731
          Length = 297

 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 29/44 (65%)

Query: 16  NEDTAGTKRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQ 59
           NE+     RS+ C+FCKR F+ +QALGGH N H+ +R   KQ +
Sbjct: 90  NEEKNSDSRSFSCSFCKRQFSTSQALGGHQNAHKAERTLEKQRK 133


>Medtr5g008280.1 | zinc finger-like protein | LC |
          chr5:1724313-1725476 | 20130731
          Length = 387

 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 32/52 (61%)

Query: 8  EDHHGDHQNEDTAGTKRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQ 59
          ++   +  N++     RS+ C FCKR F+ +QALGGH N H+ +RA  KQ +
Sbjct: 30 KEEKSEKNNDEKNLNLRSFSCLFCKRKFSTSQALGGHQNAHKAERALKKQRK 81


>Medtr3g012010.1 | zinc finger-like protein, putative | HC |
           chr3:3166965-3167882 | 20130731
          Length = 305

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 3/53 (5%)

Query: 7   GEDHHGDHQNEDTAGTKRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQ 59
           G+D + + +N   +   +S+ C FCKR F+ +QALGGH N H+ +RA  KQ +
Sbjct: 84  GKDENNNAENNSDS---KSFSCCFCKRKFSTSQALGGHQNAHKAERALEKQRK 133


>Medtr5g008390.1 | C2H2 and C2HC zinc finger protein | HC |
          chr5:1759920-1760372 | 20130731
          Length = 92

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%)

Query: 14 HQNEDTAGTKRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQTPNP 63
          ++N++     RS+ C FCKR FT +QALGGH N ++ +RA  KQ +   P
Sbjct: 4  NKNKEKNLDSRSFSCLFCKRKFTTSQALGGHQNAYKAERALEKQRKQSYP 53


>Medtr3g011970.1 | zinc finger-like protein | HC |
           chr3:3139591-3138680 | 20130731
          Length = 303

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 26/35 (74%)

Query: 25  SYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQ 59
           S+ C+FCKR F+ +QALGGH N H+ +RA  KQ Q
Sbjct: 99  SFLCSFCKRQFSTSQALGGHQNAHKAERALEKQRQ 133


>Medtr1g033340.1 | zinc finger-like protein | HC |
           chr1:11995588-11998885 | 20130731
          Length = 251

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 9/87 (10%)

Query: 3   SEVSGEDHHGDHQNEDTAGTKRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQEQTPN 62
           SEV G D    H         R + C +C+R F ++QALGGH N H+++R   K+     
Sbjct: 78  SEVLGADQ--AHNTVSAPTIHRVFSCNYCRRKFFSSQALGGHQNAHKRERTLAKRAMR-- 133

Query: 63  PFSSIQGKFTNYEQSYSSMTLPFTSEF 89
                 G FT    S +S+ L  +S F
Sbjct: 134 -----VGMFTERYTSLASLPLHGSSSF 155


>Medtr5g008310.1 | zinc finger-like protein | HC |
           chr5:1738824-1739831 | 20130731
          Length = 335

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 30/45 (66%)

Query: 13  DHQNEDTAGTKRSYDCTFCKRGFTNAQALGGHMNIHRKDRAKGKQ 57
           +++NE+     R++ C FCK  F+ +QALGGH N H+ +RA  KQ
Sbjct: 61  ENKNEEKKMDSRTFSCLFCKGKFSTSQALGGHQNAHKAERALQKQ 105