Miyakogusa Predicted Gene
- Lj5g3v1174420.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1174420.1 Non Characterized Hit- tr|A5ASX6|A5ASX6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,66.67,0.000000000005,UNKNOWN PROTEIN,NULL; GAMMA TUBULIN COMPLEX
PROTEIN,Spc97/Spc98,CUFF.54897.1
(136 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g011490.1 | Spc97/Spc98 family of spindle pole body (SBP) ... 193 3e-50
Medtr8g011490.2 | Spc97/Spc98 family of spindle pole body (SBP) ... 181 2e-46
Medtr8g011490.3 | Spc97/Spc98 family of spindle pole body (SBP) ... 181 2e-46
>Medtr8g011490.1 | Spc97/Spc98 family of spindle pole body (SBP)
component, putative | HC | chr8:3119418-3115042 |
20130731
Length = 168
Score = 193 bits (491), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/139 (70%), Positives = 115/139 (82%), Gaps = 5/139 (3%)
Query: 1 MVELDKSSETRVEDVAWLCSLSESEIDMLISLKLLIIRRAKMIGCKELANKFDLKMLRVI 60
+E DK +ETRV+DVAWLCSLSESEIDMLISLKLLII+RA+ IGCK LANKFDLKMLR I
Sbjct: 14 FIEGDKITETRVQDVAWLCSLSESEIDMLISLKLLIIKRAEWIGCKNLANKFDLKMLRAI 73
Query: 61 AFVLMEHLKEVVKDSSLIPDVVKSTAFLEACNLLKCNNEVVSSIDELSTNVGADIHTFLR 120
A VLME+LK VKD+SL+PD+VKSTAFL+ CNLL CN+EV ++I+ELST+VGADI L+
Sbjct: 74 ALVLMENLKAEVKDASLVPDMVKSTAFLDVCNLLNCNSEVSATIEELSTSVGADIQPILQ 133
Query: 121 R-----SPTSKRKKQKVGS 134
SP+ KRKKQKV
Sbjct: 134 GSSLYCSPSPKRKKQKVAG 152
>Medtr8g011490.2 | Spc97/Spc98 family of spindle pole body (SBP)
component, putative | HC | chr8:3119418-3115057 |
20130731
Length = 137
Score = 181 bits (459), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/120 (74%), Positives = 105/120 (87%)
Query: 1 MVELDKSSETRVEDVAWLCSLSESEIDMLISLKLLIIRRAKMIGCKELANKFDLKMLRVI 60
+E DK +ETRV+DVAWLCSLSESEIDMLISLKLLII+RA+ IGCK LANKFDLKMLR I
Sbjct: 14 FIEGDKITETRVQDVAWLCSLSESEIDMLISLKLLIIKRAEWIGCKNLANKFDLKMLRAI 73
Query: 61 AFVLMEHLKEVVKDSSLIPDVVKSTAFLEACNLLKCNNEVVSSIDELSTNVGADIHTFLR 120
A VLME+LK VKD+SL+PD+VKSTAFL+ CNLL CN+EV ++I+ELST+VGADI L+
Sbjct: 74 ALVLMENLKAEVKDASLVPDMVKSTAFLDVCNLLNCNSEVSATIEELSTSVGADIQPILQ 133
>Medtr8g011490.3 | Spc97/Spc98 family of spindle pole body (SBP)
component, putative | HC | chr8:3119418-3115519 |
20130731
Length = 137
Score = 181 bits (459), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/120 (74%), Positives = 105/120 (87%)
Query: 1 MVELDKSSETRVEDVAWLCSLSESEIDMLISLKLLIIRRAKMIGCKELANKFDLKMLRVI 60
+E DK +ETRV+DVAWLCSLSESEIDMLISLKLLII+RA+ IGCK LANKFDLKMLR I
Sbjct: 14 FIEGDKITETRVQDVAWLCSLSESEIDMLISLKLLIIKRAEWIGCKNLANKFDLKMLRAI 73
Query: 61 AFVLMEHLKEVVKDSSLIPDVVKSTAFLEACNLLKCNNEVVSSIDELSTNVGADIHTFLR 120
A VLME+LK VKD+SL+PD+VKSTAFL+ CNLL CN+EV ++I+ELST+VGADI L+
Sbjct: 74 ALVLMENLKAEVKDASLVPDMVKSTAFLDVCNLLNCNSEVSATIEELSTSVGADIQPILQ 133