Miyakogusa Predicted Gene

Lj5g3v1145290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1145290.1 Non Characterized Hit- tr|I3S6Z0|I3S6Z0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.2,0,Adenine
nucleotide alpha hydrolases-like,NULL; ETF,Electron transfer
flavoprotein, alpha/beta-subuni,CUFF.54852.1
         (251 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g074170.1 | electron transfer flavoprotein subunit beta | ...   471   e-133

>Medtr1g074170.1 | electron transfer flavoprotein subunit beta | HC
           | chr1:32959781-32955577 | 20130731
          Length = 251

 Score =  471 bits (1212), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 230/251 (91%), Positives = 243/251 (96%)

Query: 1   MKIMVAIKRVVDYAVKIRVKPDKTGVVTQNVKMSMNPFCEIALEEALRIRESGLASEVVA 60
           MKIMV +KRV+DYAVKIRVKPDKTGVVTQNVKMSMNPFCEIALEEALRIRESGLASEVVA
Sbjct: 1   MKIMVTVKRVIDYAVKIRVKPDKTGVVTQNVKMSMNPFCEIALEEALRIRESGLASEVVA 60

Query: 61  VSMGPAQSVDTLRTGLAMGADRGIHVEANGSLYPLSVAKILKKLVEIEKPGLLILGKQAI 120
           VSMGP+Q VDTLRTGLAMGADRGIHVEAN S+YPL VAKILKKLVEIEKPGLLILGKQAI
Sbjct: 61  VSMGPSQCVDTLRTGLAMGADRGIHVEANDSMYPLFVAKILKKLVEIEKPGLLILGKQAI 120

Query: 121 DDDCNQTGQMTAGLLNWPQGTFASKVVLDKEKQVATVDREVDDGIETVSLNLPAVITTDL 180
           DDDCNQTGQM AGLLNWPQGTFASKVVLDKEKQVATVDREVDDGIET+ LNLPAVITTDL
Sbjct: 121 DDDCNQTGQMVAGLLNWPQGTFASKVVLDKEKQVATVDREVDDGIETLCLNLPAVITTDL 180

Query: 181 RLNQPRYATLPNIMKAKSKPIKKYTPEELNVEIKSDLEIVQVTEPPKRKAGVVLSSVDEL 240
           RLNQPRYATLPNIMKAKSKPIKK+TP+ELNV+IK DLEIV+VTEPPKRK+GV++SSVDEL
Sbjct: 181 RLNQPRYATLPNIMKAKSKPIKKFTPKELNVDIKPDLEIVEVTEPPKRKSGVLVSSVDEL 240

Query: 241 IDKLKHEARVI 251
           I+KLKHEA VI
Sbjct: 241 IEKLKHEANVI 251