Miyakogusa Predicted Gene

Lj5g3v1145260.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1145260.1 Non Characterized Hit- tr|A5AS09|A5AS09_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.46,2e-17,SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL;
seg,NULL; Ribonuclease H-like,Ribonuclease H-like do,CUFF.54842.1
         (660 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g036325.1 | hypothetical protein | LC | chr4:13081348-1308...    95   2e-19

>Medtr4g036325.1 | hypothetical protein | LC |
           chr4:13081348-13082899 | 20130731
          Length = 204

 Score = 95.1 bits (235), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/99 (49%), Positives = 67/99 (67%), Gaps = 2/99 (2%)

Query: 112 MIICHGYP-ISIVDHEGFRRFSNSLQPLFKV-DRRMVKKEILKLYNEKKSETMELLSNNK 169
           MII H YP +SIVDH GFR +S  LQ LFKV  R  VK +I+K+Y  +K +TM LL   +
Sbjct: 1   MIIIHEYPPLSIVDHLGFRAYSEGLQHLFKVPSRNTVKSDIIKIYENEKLKTMGLLDKIE 60

Query: 170 SRVAITADMWSCRDKDKHYMAIKAHFIDDSMTRQSRMLR 208
           S++A+T+ M +  ++ K YM I AH+I D  + QSR+LR
Sbjct: 61  SKIALTSYMLTASNQKKGYMVITAHYISDDWSMQSRILR 99