Miyakogusa Predicted Gene

Lj5g3v1145220.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1145220.1 Non Characterized Hit- tr|K4DDC4|K4DDC4_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,30.19,3e-18,seg,NULL,
NODE_86116_length_1632_cov_26.860907.path2.1
         (382 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g073930.1 | hypothetical protein | HC | chr1:32853967-3285...   304   9e-83

>Medtr1g073930.1 | hypothetical protein | HC |
           chr1:32853967-32857458 | 20130731
          Length = 644

 Score =  304 bits (779), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 196/351 (55%), Positives = 224/351 (63%), Gaps = 31/351 (8%)

Query: 22  SPTLLPLPTEALVRWLSSPCKKEKKIL--KSENGLNQSQGLAEXXXXXXXXXXX----XX 75
           SP+LLPLPTEALV WLSSP +K +KIL  KSE GL +S  L                   
Sbjct: 316 SPSLLPLPTEALVHWLSSPTRKGEKILNRKSEIGLVESITLGSSTSPSSSSKKFWNLCDS 375

Query: 76  XXXFWNVSDSSDLSGAANGTWSKMSSSVSPSRLSKFQVAFDSIAPPSYPSIMLSPNSTPS 135
               WN SDSSD+SG ANG   KMSSS+SP  LS+FQV FDSI        + SP S+P+
Sbjct: 376 SKTVWNASDSSDMSGTANGMRRKMSSSISPGSLSEFQVPFDSI--------LFSPKSSPN 427

Query: 136 CRAFSSAKGKSDQHRLNDDNSPFSLNSVGSRNVIQTPQSDSSSDLPVGLSLVSAYNGKED 195
           C+A  S           D+NSPFSLNS+ S NVIQTPQSD SSDL VGLSL    N ++D
Sbjct: 428 CKADRS-------ENFIDENSPFSLNSISSGNVIQTPQSDCSSDLHVGLSLAHIDNQRKD 480

Query: 196 SSNPELNSFSEILQSENLLLKSSMPLEDSVNSSFQFDCLTVPYESIDLSKLRKLLDDPD- 254
           + NP+ NSFS++LQSEN+LL SS+PLEDSVNSSFQFDCLT+PYESIDLSKL K LD  D 
Sbjct: 481 NFNPDFNSFSDVLQSENILLNSSLPLEDSVNSSFQFDCLTMPYESIDLSKLPKKLDARDP 540

Query: 255 PWLXXXXXXXXXXXXXRISWREGSMSQLFDWDEFDCCRCLSDEEDLG--NDRGSNRLAST 312
           PWL             RISWREG M+Q+ + DEFD CRCLSD EDL   ND GSNR++ T
Sbjct: 541 PWLSSSTIEDGSQSQMRISWREGLMNQVNEVDEFDSCRCLSD-EDLSDDNDCGSNRVSGT 599

Query: 313 QTEDNADGSGKLNCDVGLSETEGNELEIDGHDKEMLPSLLSCSGAESISTD 363
                 D   K N DVGL+ETE  ELE DG   EM       SGAESISTD
Sbjct: 600 LVNIEVDDIKKPNYDVGLTETEDKELETDGIGNEMF------SGAESISTD 644