Miyakogusa Predicted Gene

Lj5g3v1145200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1145200.1 Non Characterized Hit- tr|D7T2M8|D7T2M8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,43.79,0.0000000000001,seg,NULL,
NODE_80082_length_657_cov_24.508371.path2.1
         (191 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g073930.1 | hypothetical protein | HC | chr1:32853967-3285...   153   8e-38

>Medtr1g073930.1 | hypothetical protein | HC |
           chr1:32853967-32857458 | 20130731
          Length = 644

 Score =  153 bits (387), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 89/133 (66%), Positives = 104/133 (78%), Gaps = 8/133 (6%)

Query: 63  EPPKGCLRFLSSSSYKTPVHRPKNISKTPSSGANETALER--SKSKSSKENLPKGSNAGL 120
           E PKGCLRFL+SS +KTPV+RPK+ISKTP+S     AL++  S S SSKENLPKG+N GL
Sbjct: 60  EVPKGCLRFLASSHFKTPVNRPKSISKTPNSAPRGLALKQSKSNSNSSKENLPKGNNVGL 119

Query: 121 PMKKLVSDKARVNKKNPPCLYQWQSGKKSGSRTGQKSK---PLDENGKFLPTLPSASKEL 177
             K LVS+KA   KKNPPCLYQWQSGKKS SRTGQKSK    L+E+G+  P  PS SKEL
Sbjct: 120 QTKTLVSNKA---KKNPPCLYQWQSGKKSSSRTGQKSKLTSTLNEHGQISPAFPSTSKEL 176

Query: 178 KEKEDILGRINDN 190
           K+KEDI+G I+DN
Sbjct: 177 KQKEDIVGGISDN 189