Miyakogusa Predicted Gene

Lj5g3v1135080.4
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1135080.4 tr|Q53M54|Q53M54_ORYSJ Expressed protein OS=Oryza
sativa subsp. japonica GN=Os11g0247500 PE=2
SV=1,43.75,0.0000000004,seg,NULL,CUFF.54869.4
         (521 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g073930.1 | hypothetical protein | HC | chr1:32853967-3285...   461   e-129

>Medtr1g073930.1 | hypothetical protein | HC |
           chr1:32853967-32857458 | 20130731
          Length = 644

 Score =  461 bits (1185), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 300/548 (54%), Positives = 340/548 (62%), Gaps = 72/548 (13%)

Query: 2   KKLVSDKARVNKKNPPCLYQWQSGKKSGSRTGQKSK---PLDENGKFLPTLPSASKELKE 58
           K LVS+KA   KKNPPCLYQWQSGKKS SRTGQKSK    L+E+G+  P  PS SKELK+
Sbjct: 122 KTLVSNKA---KKNPPCLYQWQSGKKSSSRTGQKSKLTSTLNEHGQISPAFPSTSKELKQ 178

Query: 59  KEDILGRINDNA------------GNG-------------EVEENSDTSICRTPPIHNSV 93
           KEDI+G I+DN             GN              E E+N + SI +TPPIH+S+
Sbjct: 179 KEDIVGGISDNDVESTHLKSSNRDGNSTPSSKKVSESNYEEAEDNLNRSISKTPPIHSSL 238

Query: 94  SPEIQCVS-----TTPACYGAGYIVSGVTDKRKCRPRGILTVEENCSEFAKMTADSFXXX 148
           SPEIQ  S     TTP CY AGYIVSGVTDKRKCRPRGILTVEEN S  AK  ADS    
Sbjct: 239 SPEIQGGSSLDSTTTPGCYAAGYIVSGVTDKRKCRPRGILTVEENYSCSAKSVADSIDDG 298

Query: 149 X-----XXXXXXXXXXXSPTLLPLPTEALVRWLSSPCKKEKKIL--KSENGLNQSQGLAE 201
                            SP+LLPLPTEALV WLSSP +K +KIL  KSE GL +S  L  
Sbjct: 299 EDDDDDEKKTMDVIKEDSPSLLPLPTEALVHWLSSPTRKGEKILNRKSEIGLVESITLGS 358

Query: 202 XXXXXXXXXXX----XXXXXFWNVSDSSDLSGAANGTWSKMSSSVSPSRLSKFQVAFDSI 257
                                WN SDSSD+SG ANG   KMSSS+SP  LS+FQV FDSI
Sbjct: 359 STSPSSSSKKFWNLCDSSKTVWNASDSSDMSGTANGMRRKMSSSISPGSLSEFQVPFDSI 418

Query: 258 APPSYPSIMLSPNSTPSCRAFSSAKGKSDQHRLNDDNSPFSLNSVGSRNVIQTPQSDSSS 317
                   + SP S+P+C+A  S           D+NSPFSLNS+ S NVIQTPQSD SS
Sbjct: 419 --------LFSPKSSPNCKADRS-------ENFIDENSPFSLNSISSGNVIQTPQSDCSS 463

Query: 318 DLPVGLSLVSAYNGKEDSSNPELNSFSEILQSENLLLKSSMPLEDSVNSSFQFDCLTVPY 377
           DL VGLSL    N ++D+ NP+ NSFS++LQSEN+LL SS+PLEDSVNSSFQFDCLT+PY
Sbjct: 464 DLHVGLSLAHIDNQRKDNFNPDFNSFSDVLQSENILLNSSLPLEDSVNSSFQFDCLTMPY 523

Query: 378 ESIDLSKLRKLLDDPD-PWLXXXXXXXXXXXXXRISWREGSMSQLFDWDEFDCCRCLSDE 436
           ESIDLSKL K LD  D PWL             RISWREG M+Q+ + DEFD CRCLSD 
Sbjct: 524 ESIDLSKLPKKLDARDPPWLSSSTIEDGSQSQMRISWREGLMNQVNEVDEFDSCRCLSD- 582

Query: 437 EDLG--NDRGSNRLASTQTEDNADGSGKLNCDVGLSETEGNELEIDGHDKEMLPSLLSCS 494
           EDL   ND GSNR++ T      D   K N DVGL+ETE  ELE DG   EM       S
Sbjct: 583 EDLSDDNDCGSNRVSGTLVNIEVDDIKKPNYDVGLTETEDKELETDGIGNEMF------S 636

Query: 495 GAESISTD 502
           GAESISTD
Sbjct: 637 GAESISTD 644