Miyakogusa Predicted Gene

Lj5g3v1118470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1118470.1 Non Characterized Hit- tr|I1IZK8|I1IZK8_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,36,6e-19,seg,NULL,CUFF.54792.1
         (271 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g069610.1 | hypothetical protein | HC | chr1:30263456-3026...   210   9e-55
Medtr1g073670.1 | hypothetical protein | HC | chr1:32685486-3268...    55   9e-08

>Medtr1g069610.1 | hypothetical protein | HC |
           chr1:30263456-30261145 | 20130731
          Length = 449

 Score =  210 bits (535), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 140/317 (44%), Positives = 159/317 (50%), Gaps = 55/317 (17%)

Query: 1   MGCFLACFGSSKRK----LQRNAGSCKPEKPCVSTVQDHS----------------SKTV 40
           MGCFL CFGSSK      LQR+A S KP +  V  VQDHS                ++ V
Sbjct: 1   MGCFLGCFGSSKHNRHQVLQRDANSSKPHQYNVPLVQDHSKTLLSPSLESPQPQVKTEEV 60

Query: 41  LIH---TXXXXXXXXXXXXXXXXVSTRKKVTFDSNVKTYEPVLQDEVGGLRESEEGGKVE 97
           L+    T                V+ RKKVTFDSNVKTYE VL          EEGGK E
Sbjct: 61  LLFNKKTEEERGCCRDNIEEEVSVTVRKKVTFDSNVKTYESVL---------PEEGGKEE 111

Query: 98  ALVK---QXXXXXXXXXXXXXXXXXXYPPNHRYQNCRXXXXXXXXXXXXYGAXXXXXXXX 154
           AL +                      YPP+HRYQNCR            + +        
Sbjct: 112 ALAEPNHSKSSSCEDSSSVTSTSTGSYPPHHRYQNCRDSDDEEEEVLDDWASDLSDDEEE 171

Query: 155 XXXXXXXX-------XXXXMSCSKATID---VDHVFAEEVESPILAFEGDVKSIGFNSNA 204
                              M  SK  +    +DHVF EEV+SPI  +E DV+SIG N NA
Sbjct: 172 DDGVREEGDELGVEFEEDGMGYSKLRVRDDIIDHVFTEEVDSPIPTYERDVESIGVNFNA 231

Query: 205 RDRSVYVHPVLNPVENLSQWKVVKGKRTPTLRPQKENFVSSNHDS----------ETGTS 254
           RDRSVYVH VLNPVEN++QWKVVK KRTP  RPQKENFVSSNH+S          E GT 
Sbjct: 232 RDRSVYVHSVLNPVENMAQWKVVKAKRTPRSRPQKENFVSSNHESEVSFGVKEILEAGTP 291

Query: 255 KKLNQELSVDASLSNWL 271
           KKLNQE+ VDASLSNWL
Sbjct: 292 KKLNQEIPVDASLSNWL 308


>Medtr1g073670.1 | hypothetical protein | HC |
           chr1:32685486-32684414 | 20130731
          Length = 298

 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 19/85 (22%)

Query: 206 DRSVYVHPVLNPVENLSQWKVVKGKRTPTLRPQKENFVSSNH------------------ 247
           +RS+ ++ VL+PVENL+QWK +K K   + + +KEN  S                     
Sbjct: 200 ERSINMNSVLHPVENLTQWKAIKAKVASSKQTRKENVPSEQKTSMLPVVLESSSKFSPCV 259

Query: 248 -DSETGTSKKLNQELSVDASLSNWL 271
            +S    SK L QE++VDASLSNWL
Sbjct: 260 LESNAIQSKPLLQEIAVDASLSNWL 284