Miyakogusa Predicted Gene

Lj5g3v1118400.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1118400.1 Non Characterized Hit- tr|Q8L8R3|Q8L8R3_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,40.48,2e-18,seg,NULL,CUFF.54784.1
         (172 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g069640.1 | hypothetical protein | HC | chr1:30298562-3029...   137   4e-33
Medtr1g075530.1 | embryo sac development arrest protein | HC | c...    62   2e-10

>Medtr1g069640.1 | hypothetical protein | HC |
           chr1:30298562-30296871 | 20130731
          Length = 155

 Score =  137 bits (346), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/183 (50%), Positives = 101/183 (55%), Gaps = 39/183 (21%)

Query: 1   MNTKTMRLPPRRVLTPST--TTNKRKERDGP--FERPAPVSIPIPVPGPTSKLPKPDNKP 56
           MNTKTMRLPPRRVLTPST  T+NKRKERD    FERP P      +PGP SKL K D KP
Sbjct: 1   MNTKTMRLPPRRVLTPSTKTTSNKRKERDDTSLFERPKP-----NIPGPGSKLLKLD-KP 54

Query: 57  ITPRLGAEPIQNTAAGATTSKVSVSEPMMMPPSNQLLAGYLAHEYLTKGTLLGQPWVPAK 116
           ++ + G+ P+                     PSNQLLAGYLAHEYLTKGTLLGQ WVP K
Sbjct: 55  LS-KTGSAPM---------------------PSNQLLAGYLAHEYLTKGTLLGQQWVPGK 92

Query: 117 TDGPTKXXXXX-------XXXXXXXXXXXXXXXXXXXXXLLRGGGTHLPGVVNPTQLARF 169
           T                                      LL+GGGTHL GVVNPTQLARF
Sbjct: 93  TKEEDDSGEEGEAATETPCQSTEMKNRKEERERYVEVTGLLKGGGTHLQGVVNPTQLARF 152

Query: 170 LHL 172
           LHL
Sbjct: 153 LHL 155


>Medtr1g075530.1 | embryo sac development arrest protein | HC |
           chr1:33450188-33451469 | 20130731
          Length = 141

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 50/103 (48%), Gaps = 19/103 (18%)

Query: 88  PSNQLLAGYLAHEYLTKGTLLGQPWVP-----AKTD-----GPTKXXXXXXXXXXXXXXX 137
           PSN+LLAGYLAHE+LTKGTLLGQ +        +TD     G T+               
Sbjct: 37  PSNRLLAGYLAHEFLTKGTLLGQKFDQRNQNRTETDSDFVVGLTEQQRQSQLYSRAEASD 96

Query: 138 XXXXXXX---------XXXXLLRGGGTHLPGVVNPTQLARFLH 171
                               +L+  GTH+ G+VNPTQL+R++H
Sbjct: 97  DALTRAEGRKEHETYGKVASILKTNGTHIKGIVNPTQLSRWIH 139