Miyakogusa Predicted Gene

Lj5g3v1117160.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1117160.1 Non Characterized Hit- tr|I3S021|I3S021_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.3,0,ATPases
associated with a variety of cellula,AAA+ ATPase domain; ABC_tran,ABC
transporter-like; SUBF,CUFF.54838.1
         (287 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g069750.1 | ABC transporter family I protein, SmABCI prote...   442   e-124
Medtr1g069750.2 | ABC transporter family I protein, SmABCI prote...   442   e-124
Medtr1g084720.1 | ABC transporter I family protein | HC | chr1:3...   242   2e-64

>Medtr1g069750.1 | ABC transporter family I protein, SmABCI protein
           | HC | chr1:30419329-30414870 | 20130731
          Length = 299

 Score =  442 bits (1137), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/299 (73%), Positives = 234/299 (78%), Gaps = 12/299 (4%)

Query: 1   MAI---QDSERSGGGGIRVQGMQFTYPG---QQPPLFLDFHLDVSPGSRCLLLGANGSGK 54
           MAI   Q        GIRVQGMQF+Y     QQPPLF+DF+L VSPGSRCLL+GANGSGK
Sbjct: 1   MAIEQKQQENEDSSNGIRVQGMQFSYNDIQQQQPPLFVDFNLQVSPGSRCLLVGANGSGK 60

Query: 55  TTLLKILAGKHMVGGRDVVRVLNGSAFHDTQLVCSGDLSYLGGSWSKTIGCAGEIPLQGD 114
           TTLLKILAGKHMVGG+DVVRVLN SAFHDTQLVCSGDL+YLGGSWSK +GCAG+IPLQGD
Sbjct: 61  TTLLKILAGKHMVGGKDVVRVLNCSAFHDTQLVCSGDLAYLGGSWSKNVGCAGDIPLQGD 120

Query: 115 FSAEHMIFGVEGADPXXXXXXXXXXXXXXQWRMHKVSDGQRRRVQICLGLLHPYKXXXXX 174
           FSAEHMIFGVEG DP              QWRMHKVSDGQRRRVQICLGLLHPYK     
Sbjct: 121 FSAEHMIFGVEGVDPERRDKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLHPYKVLLLD 180

Query: 175 XXXXXXXXXXRMDLLDFFKEECEQREATIVYATHIFDGLETWATHLAYIQEGELKRTEKI 234
                     RMDLL+FFKEECEQREAT+VYATHIFDGLETWATHLAYIQEGEL+R EKI
Sbjct: 181 EVTVDLDVVTRMDLLEFFKEECEQREATVVYATHIFDGLETWATHLAYIQEGELRRAEKI 240

Query: 235 SDVNELKSSANLLSVVESWLRAETKLEKKNPTSNVQKT-----SSSPF-FSSRHMAYYR 287
           SDVNELKSS NLLSVVESWLRAETKLEKK P  N         ++SPF  SSRHMAYYR
Sbjct: 241 SDVNELKSSINLLSVVESWLRAETKLEKKKPVQNTSHAQGNSFTNSPFSSSSRHMAYYR 299


>Medtr1g069750.2 | ABC transporter family I protein, SmABCI protein
           | HC | chr1:30419329-30413139 | 20130731
          Length = 299

 Score =  442 bits (1137), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/299 (73%), Positives = 234/299 (78%), Gaps = 12/299 (4%)

Query: 1   MAI---QDSERSGGGGIRVQGMQFTYPG---QQPPLFLDFHLDVSPGSRCLLLGANGSGK 54
           MAI   Q        GIRVQGMQF+Y     QQPPLF+DF+L VSPGSRCLL+GANGSGK
Sbjct: 1   MAIEQKQQENEDSSNGIRVQGMQFSYNDIQQQQPPLFVDFNLQVSPGSRCLLVGANGSGK 60

Query: 55  TTLLKILAGKHMVGGRDVVRVLNGSAFHDTQLVCSGDLSYLGGSWSKTIGCAGEIPLQGD 114
           TTLLKILAGKHMVGG+DVVRVLN SAFHDTQLVCSGDL+YLGGSWSK +GCAG+IPLQGD
Sbjct: 61  TTLLKILAGKHMVGGKDVVRVLNCSAFHDTQLVCSGDLAYLGGSWSKNVGCAGDIPLQGD 120

Query: 115 FSAEHMIFGVEGADPXXXXXXXXXXXXXXQWRMHKVSDGQRRRVQICLGLLHPYKXXXXX 174
           FSAEHMIFGVEG DP              QWRMHKVSDGQRRRVQICLGLLHPYK     
Sbjct: 121 FSAEHMIFGVEGVDPERRDKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLHPYKVLLLD 180

Query: 175 XXXXXXXXXXRMDLLDFFKEECEQREATIVYATHIFDGLETWATHLAYIQEGELKRTEKI 234
                     RMDLL+FFKEECEQREAT+VYATHIFDGLETWATHLAYIQEGEL+R EKI
Sbjct: 181 EVTVDLDVVTRMDLLEFFKEECEQREATVVYATHIFDGLETWATHLAYIQEGELRRAEKI 240

Query: 235 SDVNELKSSANLLSVVESWLRAETKLEKKNPTSNVQKT-----SSSPF-FSSRHMAYYR 287
           SDVNELKSS NLLSVVESWLRAETKLEKK P  N         ++SPF  SSRHMAYYR
Sbjct: 241 SDVNELKSSINLLSVVESWLRAETKLEKKKPVQNTSHAQGNSFTNSPFSSSSRHMAYYR 299


>Medtr1g084720.1 | ABC transporter I family protein | HC |
           chr1:37711246-37714842 | 20130731
          Length = 333

 Score =  242 bits (618), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 126/271 (46%), Positives = 163/271 (60%), Gaps = 10/271 (3%)

Query: 1   MAIQDSERSGGGGIRVQGMQFTYPG-------QQPPLFLDFHLDVSPGSRCLLLGANGSG 53
           M +  +  S    + ++ ++FTYPG          PL   F L++  G RCLL+G+NG+G
Sbjct: 1   MGVNANSDSKPITVEIKELKFTYPGIDGHPPPGSKPLIEHFSLNLFSGDRCLLVGSNGAG 60

Query: 54  KTTLLKILAGKHMVGGRDVVRVLNGSAFHDTQLVCSGDLSYLGGSWSKTIGCAG-EIPLQ 112
           KTT+LKIL GKHMV   ++VRVL  SAFHDT L  SGDL YLGG W + +  AG E+P+Q
Sbjct: 61  KTTILKILGGKHMVEP-EMVRVLGRSAFHDTTLTSSGDLCYLGGEWRRDVAFAGFEVPIQ 119

Query: 113 GDFSAEHMIFGVEGADPXXXXXXXXXXXXXXQWRMHKVSDGQRRRVQICLGLLHPYKXXX 172
            D SAE MIFGV G DP               WR+HKVSDGQRRRVQIC+GLL P++   
Sbjct: 120 MDISAEKMIFGVAGIDPARRAELIKVLDINLSWRLHKVSDGQRRRVQICMGLLKPFQVLL 179

Query: 173 XXXXXXXXXXXXRMDLLDFFKEECEQREATIVYATHIFDGLETWATHLAYIQEGELKRTE 232
                       R DLL F ++EC++R ATI+YATHIFDGLE W T++ Y+  G L+   
Sbjct: 180 LDEITVDLDVLARADLLKFLRKECDERGATIIYATHIFDGLEDWPTNIVYVAHGRLELAM 239

Query: 233 KISDVNELKSSANLLSVVESWLRAETKLEKK 263
            I  V E  S  +L+  VE WLR E   +++
Sbjct: 240 PIEKVKE-TSKLSLMRTVEVWLRKERDEDRR 269