Miyakogusa Predicted Gene

Lj5g3v1073880.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1073880.1 Non Characterized Hit- tr|I1IVM3|I1IVM3_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,62.12,3e-17,LexA/Signal peptidase,Peptidase S24/S26A/S26B/S26C; no
description,Peptidase S24/S26A/S26B/S26C, bet,CUFF.54750.1
         (205 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g069900.1 | peptidase S24/S26A/S26B/S26C family protein | ...   311   3e-85
Medtr1g069870.1 | peptidase S24/S26A/S26B/S26C family protein | ...   286   9e-78
Medtr1g069890.1 | peptidase S24/S26A/S26B/S26C family protein | ...   178   4e-45
Medtr1g069860.1 | peptidase S24/S26A/S26B/S26C family protein | ...    99   3e-21
Medtr8g039980.2 | inner membrane protease subunit-like protein |...    51   6e-07
Medtr8g039980.3 | inner membrane protease subunit-like protein |...    51   6e-07
Medtr8g039980.1 | inner membrane protease subunit-like protein |...    50   2e-06

>Medtr1g069900.1 | peptidase S24/S26A/S26B/S26C family protein | HC
           | chr1:30577405-30573965 | 20130731
          Length = 205

 Score =  311 bits (796), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 146/205 (71%), Positives = 172/205 (83%)

Query: 1   MVSLSTWFRYIGYKLEYSVSLSWKNYKRGQIGEGEVRDLVWKNFFQGKLTYLHWNQGEEM 60
           MVS +TW RY+  K +Y++ L +KN+K G + + E+ D ++K+F  GK+T+LHW +GEEM
Sbjct: 1   MVSFTTWCRYLQSKAQYTIDLGYKNHKGGHVKDNELMDFIFKHFTNGKMTFLHWTKGEEM 60

Query: 61  APTIAGKVATLLVRKLPNADPTRVFVGDVVVLKDPWKPDNYLVRRLAAVEGYEMASTDEK 120
           APTI  K ATLLVR+LP  D  RV+VGDVVVLK+P KPD+YLVRRLAA EGYEMASTDEK
Sbjct: 61  APTIDAKGATLLVRRLPIPDQKRVYVGDVVVLKNPEKPDDYLVRRLAATEGYEMASTDEK 120

Query: 121 DEPFVLEKDQCWVVAENEKFKPKEANDSRTFGPVQMTDIVGRVIYCLRNAVDHGRVQNSH 180
           DE FVLEKDQCWVVAENEK K KEA DSRTFGP+ MT+IVGRV+YCLRNAVDHGRVQNS 
Sbjct: 121 DESFVLEKDQCWVVAENEKLKAKEAIDSRTFGPIHMTNIVGRVLYCLRNAVDHGRVQNSP 180

Query: 181 YSMPKDSPVLEVELDVDEMAKNHKA 205
           +SM KDSPVLE+ELDVDEM K+HKA
Sbjct: 181 FSMQKDSPVLEMELDVDEMVKSHKA 205


>Medtr1g069870.1 | peptidase S24/S26A/S26B/S26C family protein | HC
           | chr1:30558027-30553702 | 20130731
          Length = 205

 Score =  286 bits (732), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 138/205 (67%), Positives = 164/205 (80%)

Query: 1   MVSLSTWFRYIGYKLEYSVSLSWKNYKRGQIGEGEVRDLVWKNFFQGKLTYLHWNQGEEM 60
           MVS  T  RY+  K +Y+ SL+ KN   G + E EV   ++K+F  G++T+LH N+GEEM
Sbjct: 1   MVSWRTQLRYLASKAQYASSLALKNRIGGHVKENEVATFIFKHFCHGRMTFLHRNKGEEM 60

Query: 61  APTIAGKVATLLVRKLPNADPTRVFVGDVVVLKDPWKPDNYLVRRLAAVEGYEMASTDEK 120
           AP IAGK A LLVR+LP  D  R+++GDVVVLK+P KPD+YLVRRLAA EGYEMASTDEK
Sbjct: 61  APAIAGKGAILLVRRLPIPDLRRLYIGDVVVLKNPEKPDDYLVRRLAATEGYEMASTDEK 120

Query: 121 DEPFVLEKDQCWVVAENEKFKPKEANDSRTFGPVQMTDIVGRVIYCLRNAVDHGRVQNSH 180
           DE FVLEKDQCWVVAENEK K KEA DSRTFGP+ +T+IVGRV+YCLR+A DH RVQNS 
Sbjct: 121 DESFVLEKDQCWVVAENEKLKAKEAIDSRTFGPIHITNIVGRVLYCLRSAGDHNRVQNSF 180

Query: 181 YSMPKDSPVLEVELDVDEMAKNHKA 205
            SM  DSPVLE+EL+VDEMAK+HKA
Sbjct: 181 VSMHYDSPVLEMELNVDEMAKSHKA 205


>Medtr1g069890.1 | peptidase S24/S26A/S26B/S26C family protein | HC
           | chr1:30567642-30566418 | 20130731
          Length = 131

 Score =  178 bits (451), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 91/125 (72%), Positives = 104/125 (83%), Gaps = 2/125 (1%)

Query: 82  TRVFVG-DVVVLKDPWKPDNYLVRRLAAVEGYEMASTDEKDEPFVLEKDQCWVVAENEKF 140
           T V +G DV+VLK+P KPD+YLVRRLAA E YEMAS  EKDE FVLEKDQCWVVA N K 
Sbjct: 8   TLVMLGRDVLVLKNPEKPDDYLVRRLAATE-YEMASIVEKDESFVLEKDQCWVVAGNGKL 66

Query: 141 KPKEANDSRTFGPVQMTDIVGRVIYCLRNAVDHGRVQNSHYSMPKDSPVLEVELDVDEMA 200
           K KEA DSRTFGP+ +T+IVGRV+YC+R+A DH RV+NS  SM  DSPVLEVEL+VDEMA
Sbjct: 67  KAKEAIDSRTFGPIHITNIVGRVLYCMRSAGDHNRVRNSFVSMHYDSPVLEVELNVDEMA 126

Query: 201 KNHKA 205
           K+HKA
Sbjct: 127 KSHKA 131


>Medtr1g069860.1 | peptidase S24/S26A/S26B/S26C family protein | HC
           | chr1:30546369-30546004 | 20130731
          Length = 94

 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/67 (70%), Positives = 55/67 (82%)

Query: 139 KFKPKEANDSRTFGPVQMTDIVGRVIYCLRNAVDHGRVQNSHYSMPKDSPVLEVELDVDE 198
           +FK +EA DSRTFGP+ M  IVGRV+YC+R+AVDH RV NS  SM  DSPVLE+E DVDE
Sbjct: 23  QFKWQEAIDSRTFGPIHMNKIVGRVLYCMRSAVDHNRVLNSKESMFFDSPVLEMEHDVDE 82

Query: 199 MAKNHKA 205
           MAK+HKA
Sbjct: 83  MAKSHKA 89


>Medtr8g039980.2 | inner membrane protease subunit-like protein | HC
           | chr8:14866261-14869549 | 20130731
          Length = 162

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 10/127 (7%)

Query: 57  GEEMAPTIAGKVATLLVRKLPNADPTRVFVGDVVVLKDPWKPDNYLVRRLAAVEGYEMA- 115
           G  M PTI    +  L  ++ +    +   GD+V+L+ P  P   + +RL  +EG  +  
Sbjct: 40  GPSMLPTIDVTPSLYLAERI-SPRFGKAAQGDIVILRSPRNPRMCITKRLVGLEGDTITY 98

Query: 116 ----STDEKDEPFVLEKDQCWVVAENEKFKPKEANDSRTFGPVQMTDIVGRVIYCLRNAV 171
               + D+K E  V+ K   W+  +N K+K   +NDSR FGPV    I  R+ + +    
Sbjct: 99  VADPNKDDKQETVVVPKGHVWIEGDN-KYK---SNDSRNFGPVPYGLIESRLFWKVSPLK 154

Query: 172 DHGRVQN 178
           D G   N
Sbjct: 155 DFGSFWN 161


>Medtr8g039980.3 | inner membrane protease subunit-like protein | HC
           | chr8:14866261-14869549 | 20130731
          Length = 162

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 10/127 (7%)

Query: 57  GEEMAPTIAGKVATLLVRKLPNADPTRVFVGDVVVLKDPWKPDNYLVRRLAAVEGYEMA- 115
           G  M PTI    +  L  ++ +    +   GD+V+L+ P  P   + +RL  +EG  +  
Sbjct: 40  GPSMLPTIDVTPSLYLAERI-SPRFGKAAQGDIVILRSPRNPRMCITKRLVGLEGDTITY 98

Query: 116 ----STDEKDEPFVLEKDQCWVVAENEKFKPKEANDSRTFGPVQMTDIVGRVIYCLRNAV 171
               + D+K E  V+ K   W+  +N K+K   +NDSR FGPV    I  R+ + +    
Sbjct: 99  VADPNKDDKQETVVVPKGHVWIEGDN-KYK---SNDSRNFGPVPYGLIESRLFWKVSPLK 154

Query: 172 DHGRVQN 178
           D G   N
Sbjct: 155 DFGSFWN 161


>Medtr8g039980.1 | inner membrane protease subunit-like protein | HC
           | chr8:14867930-14869175 | 20130731
          Length = 193

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 24/153 (15%)

Query: 28  RGQIGEGEVRDLVWKNFFQGKLTYLHWNQ----------GEEMAPTIAGKVATLLVRKLP 77
           R  I E   + L+   FF      LH             G  M PTI    +  L  ++ 
Sbjct: 5   RSIIKEACEKSLIVAKFF----CVLHVTNKYLIDPVQTIGPSMLPTIDVTPSLYLAERI- 59

Query: 78  NADPTRVFVGDVVVLKDPWKPDNYLVRRLAAVEGYEMA-----STDEKDEPFVLEKDQCW 132
           +    +   GD+V+L+ P  P   + +RL  +EG  +      + D+K E  V+ K   W
Sbjct: 60  SPRFGKAAQGDIVILRSPRNPRMCITKRLVGLEGDTITYVADPNKDDKQETVVVPKGHVW 119

Query: 133 VVAENEKFKPKEANDSRTFGPVQMTDIVGRVIY 165
           +  +N K+K   +NDSR FGPV    I  R ++
Sbjct: 120 IEGDN-KYK---SNDSRNFGPVPYGLIESRYLH 148