Miyakogusa Predicted Gene

Lj5g3v1049250.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1049250.1 tr|D7LIS0|D7LIS0_ARALL Lipase class 3 family
protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRA,57.14,1e-17,CGI-141 RELATED,NULL; CGI-141-RELATED/LIPASE
CONTAINING PROTEIN,NULL,99985_g.1
         (84 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g070195.1 | alpha/beta-hydrolase superfamily protein | HC ...   152   8e-38

>Medtr1g070195.1 | alpha/beta-hydrolase superfamily protein | HC |
           chr1:30881704-30887851 | 20130731
          Length = 550

 Score =  152 bits (383), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 70/83 (84%), Positives = 75/83 (90%)

Query: 2   KIEGTKPAVSEELYIPGTVYYLKRNSGSQNNVGKDFFTLLKMQSGEHFPRIILSGNFITD 61
           KIE TKPAV EEL+IPGTVYYLKRN GSQN+VGK+ +TLLK Q GEHF RIILSGNFITD
Sbjct: 464 KIEETKPAVPEELFIPGTVYYLKRNLGSQNDVGKEVYTLLKRQPGEHFQRIILSGNFITD 523

Query: 62  HRCDSHNYALRDVLKGLPWYGEE 84
           H+CDSH YALRDVLKGLPWYGEE
Sbjct: 524 HKCDSHTYALRDVLKGLPWYGEE 546