Miyakogusa Predicted Gene

Lj5g3v1037130.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1037130.1 Non Characterized Hit- tr|I3SGB8|I3SGB8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.85,0,ParA,ATPase-like, ParA/MinD; AAA_31,AAA domain; P-loop
containing nucleoside triphosphate hydrolases,CUFF.54708.1
         (279 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g070360.1 | iron-sulfur nubpl-like protein | HC | chr1:311...   513   e-146
Medtr6g086600.1 | nucleotide-binding protein | HC | chr6:3217233...   178   5e-45
Medtr6g086600.2 | nucleotide-binding protein | HC | chr6:3217211...   178   6e-45
Medtr1g019620.1 | cytosolic Fe-S cluster assembly factor NUBP1-l...   130   1e-30
Medtr1g019620.3 | cytosolic Fe-S cluster assembly factor NUBP1-l...   130   1e-30
Medtr1g019620.2 | cytosolic Fe-S cluster assembly factor NUBP1-l...   130   1e-30
Medtr1g016110.2 | cytosolic Fe-S cluster assembly factor NUBP1-l...   130   2e-30
Medtr1g016110.1 | cytosolic Fe-S cluster assembly factor NUBP1-l...   129   3e-30

>Medtr1g070360.1 | iron-sulfur nubpl-like protein | HC |
           chr1:31116842-31122548 | 20130731
          Length = 279

 Score =  513 bits (1320), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 245/279 (87%), Positives = 264/279 (94%)

Query: 1   MLPRRLGSVRHYAKHLRIDGVKDTIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDA 60
           M PR LGSVR YAKHLRIDGVKDTIA+ASGKGGVGKSTTAVNLAVALASK QLKVGLLDA
Sbjct: 1   MRPRWLGSVRSYAKHLRIDGVKDTIAIASGKGGVGKSTTAVNLAVALASKFQLKVGLLDA 60

Query: 61  DVYGPNIPIMMNINTKPKATLDKKMIPIEKYGIKCMSIGFLVEKDVPIVWRGPMVQKALE 120
           DVYGPNIPIMMNI+TKP+ T D KMIPI+ YGIKCMSIGFLVEK+ PIVWRGPMV KALE
Sbjct: 61  DVYGPNIPIMMNIDTKPEVTQDNKMIPIDSYGIKCMSIGFLVEKNAPIVWRGPMVSKALE 120

Query: 121 QMTRGVDWGNLDILVMDMPPGTGDVQIAMSQNLQLSGALIVSTPQDVALMDARRGVKMFN 180
           +MTRGVDWGNLDILV+DMPPGTGDVQI+MSQNLQLSGALIVSTPQDVALMDARRGV+MFN
Sbjct: 121 KMTRGVDWGNLDILVIDMPPGTGDVQISMSQNLQLSGALIVSTPQDVALMDARRGVQMFN 180

Query: 181 KVDVPILGIVENMSCFKCPHCGEPSYIFGKEGTRKTATEMGLDFLGEIPLEVEVREACDK 240
           KVD+PILGI+ENMSCFKCPHCGEPSYIFGK G   TATEMGL+FLGE+PLEVE+REACD+
Sbjct: 181 KVDIPILGIIENMSCFKCPHCGEPSYIFGKGGAHSTATEMGLNFLGEVPLEVEIREACDQ 240

Query: 241 GHPIVLAAPDSVVSRAYVDVAEKVVQKLKEQQFQPEIIL 279
           GHPIVLAAPDSVVSRAY ++AEKVVQKLKE+QFQPEI+L
Sbjct: 241 GHPIVLAAPDSVVSRAYGNIAEKVVQKLKEKQFQPEILL 279


>Medtr6g086600.1 | nucleotide-binding protein | HC |
           chr6:32172332-32166446 | 20130731
          Length = 526

 Score =  178 bits (452), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 101/259 (38%), Positives = 155/259 (59%), Gaps = 16/259 (6%)

Query: 21  VKDTIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPNIPIMMN-----INT 75
           + + IAV+S KGGVGKST AVNLA  LA     +VG+ DAD+YGP++P M++     +  
Sbjct: 176 ISNIIAVSSCKGGVGKSTVAVNLAYTLA-DMGARVGIFDADIYGPSLPTMVSPENRILEM 234

Query: 76  KPKATLDKKMIPIEKYGIKCMSIGFLVEKDVPIVWRGPMVQKALEQMTRGVDWGNLDILV 135
            P+    K +IP E  G+K +S GF  +     + RGPMV     Q+    +WG LD LV
Sbjct: 235 NPE---KKTIIPTEYMGVKLVSFGFAGQGRA--IMRGPMVSGVTNQLLTTTEWGELDYLV 289

Query: 136 MDMPPGTGDVQIAMSQNLQLSGALIVSTPQDVALMDARRGVKMFNKVDVPILGIVENMSC 195
           +DMPPGTGD+Q+ + Q + L+ A+IV+TPQ ++ +D  +GV+MF+K+ VP + +VENM  
Sbjct: 290 IDMPPGTGDIQLTLCQIVPLTAAVIVTTPQKLSFIDVAKGVRMFSKLKVPCVAVVENMCH 349

Query: 196 FKCPHCGEPSYIFGKEGTRKTATEMGLDFLGEIPLEVEVREACDKGHPIVLAAPDSVVSR 255
           F     G+  Y FG+    +   + G+  L ++P+   +  + D G P V+A P   VS+
Sbjct: 350 FDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVVADPQGEVSK 407

Query: 256 AYVDVAEKVVQ---KLKEQ 271
            + ++   VVQ   K+++Q
Sbjct: 408 IFQNLGVCVVQQCAKIRQQ 426


>Medtr6g086600.2 | nucleotide-binding protein | HC |
           chr6:32172118-32166485 | 20130731
          Length = 517

 Score =  178 bits (451), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 101/259 (38%), Positives = 155/259 (59%), Gaps = 16/259 (6%)

Query: 21  VKDTIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPNIPIMMN-----INT 75
           + + IAV+S KGGVGKST AVNLA  LA     +VG+ DAD+YGP++P M++     +  
Sbjct: 167 ISNIIAVSSCKGGVGKSTVAVNLAYTLAD-MGARVGIFDADIYGPSLPTMVSPENRILEM 225

Query: 76  KPKATLDKKMIPIEKYGIKCMSIGFLVEKDVPIVWRGPMVQKALEQMTRGVDWGNLDILV 135
            P+    K +IP E  G+K +S GF  +     + RGPMV     Q+    +WG LD LV
Sbjct: 226 NPE---KKTIIPTEYMGVKLVSFGFAGQGRA--IMRGPMVSGVTNQLLTTTEWGELDYLV 280

Query: 136 MDMPPGTGDVQIAMSQNLQLSGALIVSTPQDVALMDARRGVKMFNKVDVPILGIVENMSC 195
           +DMPPGTGD+Q+ + Q + L+ A+IV+TPQ ++ +D  +GV+MF+K+ VP + +VENM  
Sbjct: 281 IDMPPGTGDIQLTLCQIVPLTAAVIVTTPQKLSFIDVAKGVRMFSKLKVPCVAVVENMCH 340

Query: 196 FKCPHCGEPSYIFGKEGTRKTATEMGLDFLGEIPLEVEVREACDKGHPIVLAAPDSVVSR 255
           F     G+  Y FG+    +   + G+  L ++P+   +  + D G P V+A P   VS+
Sbjct: 341 FDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVVADPQGEVSK 398

Query: 256 AYVDVAEKVVQ---KLKEQ 271
            + ++   VVQ   K+++Q
Sbjct: 399 IFQNLGVCVVQQCAKIRQQ 417


>Medtr1g019620.1 | cytosolic Fe-S cluster assembly factor NUBP1-like
           protein | HC | chr1:5941945-5938193 | 20130731
          Length = 355

 Score =  130 bits (327), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 151/296 (51%), Gaps = 48/296 (16%)

Query: 17  RIDGVKDTIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPNIPIMMNINTK 76
           R+  VK  I V SGKGGVGKST +  LA ALA++   +VGLLD D+ GP+IP M+ +  +
Sbjct: 54  RMATVKHKILVLSGKGGVGKSTFSAQLAFALAAR-DFQVGLLDIDICGPSIPKMLGLEGQ 112

Query: 77  PKATLDKKMIPIE-KYGIKCMSIGFLV-EKDVPIVWRGPMVQKALEQMTRGVDWGNLDIL 134
                +    P+  +  +  MSIGF++   D  ++WRGP     ++Q  + V WG LD L
Sbjct: 113 EIHQSNLGWSPVYVESNLGVMSIGFMLPHPDEAVIWRGPRKNGLIKQFLKDVYWGELDFL 172

Query: 135 VMDMPPGTGDVQIAMSQNL---QLSGALIVSTPQDVALMDARRGVKMFNKVDVPILGIVE 191
           ++D PPGT D  I++ Q L    + GA+IV+TPQ V+L+D ++ V    KV V +LG+VE
Sbjct: 173 IVDAPPGTSDEHISIVQCLDAANVDGAIIVTTPQQVSLIDVKKEVNFCKKVGVKVLGVVE 232

Query: 192 NMSCFKCP-------------------------------------HCGEPSYIFGKEGTR 214
           NMS    P                                      C E  +   + G  
Sbjct: 233 NMSGLSQPISNLKFMKITDNGEMKDVTEWISEYMKEKAPEMLNLIACSE-VFDSSRGGAL 291

Query: 215 KTATEMGLDFLGEIPLEVEVREACDKGHPIVLAAPDSVVSRAYVDVAEKVVQKLKE 270
           K   EM + FLG++PL+ ++ +A ++G     A  D VVS   +   +K++ KL E
Sbjct: 292 KMCNEMAVPFLGKVPLDPQLCKAAEEGRS-CFADKDCVVSAPAL---QKIIDKLME 343


>Medtr1g019620.3 | cytosolic Fe-S cluster assembly factor NUBP1-like
           protein | HC | chr1:5941945-5938193 | 20130731
          Length = 355

 Score =  130 bits (327), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 151/296 (51%), Gaps = 48/296 (16%)

Query: 17  RIDGVKDTIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPNIPIMMNINTK 76
           R+  VK  I V SGKGGVGKST +  LA ALA++   +VGLLD D+ GP+IP M+ +  +
Sbjct: 54  RMATVKHKILVLSGKGGVGKSTFSAQLAFALAAR-DFQVGLLDIDICGPSIPKMLGLEGQ 112

Query: 77  PKATLDKKMIPIE-KYGIKCMSIGFLV-EKDVPIVWRGPMVQKALEQMTRGVDWGNLDIL 134
                +    P+  +  +  MSIGF++   D  ++WRGP     ++Q  + V WG LD L
Sbjct: 113 EIHQSNLGWSPVYVESNLGVMSIGFMLPHPDEAVIWRGPRKNGLIKQFLKDVYWGELDFL 172

Query: 135 VMDMPPGTGDVQIAMSQNL---QLSGALIVSTPQDVALMDARRGVKMFNKVDVPILGIVE 191
           ++D PPGT D  I++ Q L    + GA+IV+TPQ V+L+D ++ V    KV V +LG+VE
Sbjct: 173 IVDAPPGTSDEHISIVQCLDAANVDGAIIVTTPQQVSLIDVKKEVNFCKKVGVKVLGVVE 232

Query: 192 NMSCFKCP-------------------------------------HCGEPSYIFGKEGTR 214
           NMS    P                                      C E  +   + G  
Sbjct: 233 NMSGLSQPISNLKFMKITDNGEMKDVTEWISEYMKEKAPEMLNLIACSE-VFDSSRGGAL 291

Query: 215 KTATEMGLDFLGEIPLEVEVREACDKGHPIVLAAPDSVVSRAYVDVAEKVVQKLKE 270
           K   EM + FLG++PL+ ++ +A ++G     A  D VVS   +   +K++ KL E
Sbjct: 292 KMCNEMAVPFLGKVPLDPQLCKAAEEGRS-CFADKDCVVSAPAL---QKIIDKLME 343


>Medtr1g019620.2 | cytosolic Fe-S cluster assembly factor NUBP1-like
           protein | HC | chr1:5941945-5938193 | 20130731
          Length = 355

 Score =  130 bits (327), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 151/296 (51%), Gaps = 48/296 (16%)

Query: 17  RIDGVKDTIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPNIPIMMNINTK 76
           R+  VK  I V SGKGGVGKST +  LA ALA++   +VGLLD D+ GP+IP M+ +  +
Sbjct: 54  RMATVKHKILVLSGKGGVGKSTFSAQLAFALAAR-DFQVGLLDIDICGPSIPKMLGLEGQ 112

Query: 77  PKATLDKKMIPIE-KYGIKCMSIGFLV-EKDVPIVWRGPMVQKALEQMTRGVDWGNLDIL 134
                +    P+  +  +  MSIGF++   D  ++WRGP     ++Q  + V WG LD L
Sbjct: 113 EIHQSNLGWSPVYVESNLGVMSIGFMLPHPDEAVIWRGPRKNGLIKQFLKDVYWGELDFL 172

Query: 135 VMDMPPGTGDVQIAMSQNL---QLSGALIVSTPQDVALMDARRGVKMFNKVDVPILGIVE 191
           ++D PPGT D  I++ Q L    + GA+IV+TPQ V+L+D ++ V    KV V +LG+VE
Sbjct: 173 IVDAPPGTSDEHISIVQCLDAANVDGAIIVTTPQQVSLIDVKKEVNFCKKVGVKVLGVVE 232

Query: 192 NMSCFKCP-------------------------------------HCGEPSYIFGKEGTR 214
           NMS    P                                      C E  +   + G  
Sbjct: 233 NMSGLSQPISNLKFMKITDNGEMKDVTEWISEYMKEKAPEMLNLIACSE-VFDSSRGGAL 291

Query: 215 KTATEMGLDFLGEIPLEVEVREACDKGHPIVLAAPDSVVSRAYVDVAEKVVQKLKE 270
           K   EM + FLG++PL+ ++ +A ++G     A  D VVS   +   +K++ KL E
Sbjct: 292 KMCNEMAVPFLGKVPLDPQLCKAAEEGRS-CFADKDCVVSAPAL---QKIIDKLME 343


>Medtr1g016110.2 | cytosolic Fe-S cluster assembly factor NUBP1-like
           protein | HC | chr1:4217380-4219541 | 20130731
          Length = 308

 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/295 (35%), Positives = 152/295 (51%), Gaps = 46/295 (15%)

Query: 17  RIDGVKDTIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPNIPIMMNINTK 76
           R+  VK  I V SGKGGVGKST +  LA ALA++   +VGLLD D+ GP+IP M+ +  +
Sbjct: 7   RMATVKHKILVLSGKGGVGKSTFSAQLAFALAAR-DFQVGLLDIDICGPSIPKMLGLEGQ 65

Query: 77  PKATLDKKMIPIE-KYGIKCMSIGFLV-EKDVPIVWRGPMVQKALEQMTRGVDWGNLDIL 134
                +    P+  +  +  MSIGF++   D  ++WRGP     ++Q  + V WG LD L
Sbjct: 66  EIHQSNLGWSPVYVESNLGVMSIGFMLPHPDEAVIWRGPRKNGLIKQFLKDVYWGELDFL 125

Query: 135 VMDMPPGTGDVQIAMSQNL---QLSGALIVSTPQDVALMDARRGVKMFNKVDVPILGIVE 191
           ++D PPGT D  I++ Q L    + GA+IV+TPQ V+L+D ++ V    KV V +LG+VE
Sbjct: 126 IVDAPPGTSDEHISIVQCLDAANVDGAIIVTTPQQVSLIDVKKEVNFCKKVGVKVLGVVE 185

Query: 192 NMSCFKCP----------HCGE------------------------PSYIFGKE--GTRK 215
           NMS    P            GE                         S +F     G  K
Sbjct: 186 NMSGLSQPISNLKFMKITDNGEMKDVTEWISEYMKEKAPEMLNLIACSEVFDSSGGGALK 245

Query: 216 TATEMGLDFLGEIPLEVEVREACDKGHPIVLAAPDSVVSRAYVDVAEKVVQKLKE 270
              EM + FLG++PL+ ++ +A ++G     A  D VVS   +   +K++ KL E
Sbjct: 246 MCNEMAVPFLGKVPLDPQLCKAAEEGRS-CFADKDCVVSAPAL---QKIIDKLME 296


>Medtr1g016110.1 | cytosolic Fe-S cluster assembly factor NUBP1-like
           protein | HC | chr1:4214827-4219541 | 20130731
          Length = 355

 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/295 (35%), Positives = 152/295 (51%), Gaps = 46/295 (15%)

Query: 17  RIDGVKDTIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPNIPIMMNINTK 76
           R+  VK  I V SGKGGVGKST +  LA ALA++   +VGLLD D+ GP+IP M+ +  +
Sbjct: 54  RMATVKHKILVLSGKGGVGKSTFSAQLAFALAAR-DFQVGLLDIDICGPSIPKMLGLEGQ 112

Query: 77  PKATLDKKMIPIE-KYGIKCMSIGFLV-EKDVPIVWRGPMVQKALEQMTRGVDWGNLDIL 134
                +    P+  +  +  MSIGF++   D  ++WRGP     ++Q  + V WG LD L
Sbjct: 113 EIHQSNLGWSPVYVESNLGVMSIGFMLPHPDEAVIWRGPRKNGLIKQFLKDVYWGELDFL 172

Query: 135 VMDMPPGTGDVQIAMSQNL---QLSGALIVSTPQDVALMDARRGVKMFNKVDVPILGIVE 191
           ++D PPGT D  I++ Q L    + GA+IV+TPQ V+L+D ++ V    KV V +LG+VE
Sbjct: 173 IVDAPPGTSDEHISIVQCLDAANVDGAIIVTTPQQVSLIDVKKEVNFCKKVGVKVLGVVE 232

Query: 192 NMSCFKCP----------HCGE------------------------PSYIFGKE--GTRK 215
           NMS    P            GE                         S +F     G  K
Sbjct: 233 NMSGLSQPISNLKFMKITDNGEMKDVTEWISEYMKEKAPEMLNLIACSEVFDSSGGGALK 292

Query: 216 TATEMGLDFLGEIPLEVEVREACDKGHPIVLAAPDSVVSRAYVDVAEKVVQKLKE 270
              EM + FLG++PL+ ++ +A ++G     A  D VVS   +   +K++ KL E
Sbjct: 293 MCNEMAVPFLGKVPLDPQLCKAAEEGRS-CFADKDCVVSAPAL---QKIIDKLME 343