Miyakogusa Predicted Gene
- Lj5g3v0998780.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0998780.1 Non Characterized Hit- tr|A3ANJ8|A3ANJ8_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,49.46,7e-19,seg,NULL; no description,Plant lipid transfer
protein/hydrophobic protein helical domain;
Bifunction,NODE_25178_length_850_cov_54.465881.path2.1
(224 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g095250.1 | Lipid transfer protein | HC | chr7:38117812-38... 195 4e-50
Medtr1g071720.1 | Lipid transfer protein | HC | chr1:31856691-31... 145 4e-35
Medtr1g071720.2 | Lipid transfer protein | HC | chr1:31856691-31... 141 4e-34
Medtr1g103420.1 | Lipid transfer protein | HC | chr1:46817645-46... 95 6e-20
Medtr5g006940.1 | Lipid transfer protein | HC | chr5:1143135-114... 94 1e-19
>Medtr7g095250.1 | Lipid transfer protein | HC |
chr7:38117812-38119644 | 20130731
Length = 180
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/187 (62%), Positives = 139/187 (74%), Gaps = 15/187 (8%)
Query: 41 STFTPCANIITGSTNNGFAPPSTCCDSLRSLMNTNMDCACLVISANAPLFQLPINQVLAL 100
STFTPCANIITGSTNNG P +TCCDSLRSLM+TNMDCACL++S+NA +FQLPINQVLA+
Sbjct: 4 STFTPCANIITGSTNNGLVPSTTCCDSLRSLMSTNMDCACLMMSSNAQIFQLPINQVLAI 63
Query: 101 SLSRACNINGIALQCKXXXXXXXXXXXXIFGSNNPTLPSSSAAPTFSPQGSETIAEGKAH 160
SLS+ACNING ++QCK GSN+PTLPSS+ P SPQ S+T+ AH
Sbjct: 64 SLSQACNINGASVQCKGPTG---------IGSNSPTLPSSAPTP-LSPQDSKTLDVNNAH 113
Query: 161 KYENLQVAQTLVAPASSPVE-AESPTRTPGIRPVLTTPHPSASTPSCASLSPFA-FTLLA 218
YENLQ+A+ LV P+S+P+E AE+PT I PVLT+ PSAS PS S SP A F ++A
Sbjct: 114 IYENLQLAEALV-PSSAPMEAAEAPTEASRIIPVLTS-LPSASPPSYYSFSPSALFKIIA 171
Query: 219 I-MVFGI 224
I MV GI
Sbjct: 172 IVMVSGI 178
>Medtr1g071720.1 | Lipid transfer protein | HC |
chr1:31856691-31855319 | 20130731
Length = 190
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 114/178 (64%), Gaps = 11/178 (6%)
Query: 1 MEKLSAFQMRXXXXXXXXXXXXXXKLVHGQISTPCTTALMSTFTPCANIITGSTN-NGF- 58
M LS FQM+ KLV GQISTPCTT+++S+FTPCAN ITGSTN NG
Sbjct: 1 MGHLSIFQMKVISTFLLITSV---KLVFGQISTPCTTSMISSFTPCANFITGSTNYNGLI 57
Query: 59 APPSTCCDSLRSLMNTNMDCACLVISANAPLFQL-PINQVLALSLSRACNINGIALQCKX 117
P S+CCDSL+S+M+T+MDCACL+I+AN P FQL PIN+VL+ L ++CN+NG+ QCK
Sbjct: 58 TPSSSCCDSLQSMMSTSMDCACLLITANVP-FQLPPINRVLSFFLPQSCNLNGLHAQCKA 116
Query: 118 XXXXXXXXXXXIFGSNNPTLPSSSAAPTFSPQGSETIAEGKAHKYENLQVAQTLVAPA 175
IFGSN P+LP +A+P S Q ETI + KY + + +APA
Sbjct: 117 SGSPLPAPGPAIFGSNVPSLPPINASP-LSSQVDETIEVADSPKYV---IQHSAIAPA 170
>Medtr1g071720.2 | Lipid transfer protein | HC |
chr1:31856691-31855319 | 20130731
Length = 189
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 113/178 (63%), Gaps = 12/178 (6%)
Query: 1 MEKLSAFQMRXXXXXXXXXXXXXXKLVHGQISTPCTTALMSTFTPCANIITGSTN-NGF- 58
M LS FQM+ KLV GQISTPCTT+++S+FTPCAN ITGSTN NG
Sbjct: 1 MGHLSIFQMKVISTFLLITSV---KLVFGQISTPCTTSMISSFTPCANFITGSTNYNGLI 57
Query: 59 APPSTCCDSLRSLMNTNMDCACLVISANAPLFQL-PINQVLALSLSRACNINGIALQCKX 117
P S+CCDSL+S+M+T+MDCACL+I+AN P FQL PIN+VL+ L ++CN+NG+ QCK
Sbjct: 58 TPSSSCCDSLQSMMSTSMDCACLLITANVP-FQLPPINRVLSFFLPQSCNLNGLHAQCKA 116
Query: 118 XXXXXXXXXXXIFGSNNPTLPSSSAAPTFSPQGSETIAEGKAHKYENLQVAQTLVAPA 175
IFGSN P+LP +A+P S ETI + KY + + +APA
Sbjct: 117 SGSPLPAPGPAIFGSNVPSLPPINASPLSS--QDETIEVADSPKYV---IQHSAIAPA 169
>Medtr1g103420.1 | Lipid transfer protein | HC |
chr1:46817645-46816110 | 20130731
Length = 217
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 97/178 (54%), Gaps = 23/178 (12%)
Query: 28 HGQISTPCTTALMST-FTPCANIITGSTNNGFAPPSTCCDSLRSLMNTNMDCACLVISAN 86
+ QI+TPC + +ST FTPC +TGS+ NG +P + CC +L+SL ++ M+C CL+++A+
Sbjct: 25 NAQINTPCNPSTISTLFTPCMGFLTGSSANGTSPTTECCGALKSLTSSGMNCLCLLVTAS 84
Query: 87 APLFQLPINQVLALSLSRACNINGIALQCKXXXXXXXXXXXXIFGSNNPTLPSSSA-APT 145
P F++PIN+ LA+SL RACN+ G+ +QCK G ++ S S PT
Sbjct: 85 VP-FKIPINRTLAISLPRACNMPGVPVQCKASASPLPAPGPVALGPSHSPASSPSGFIPT 143
Query: 146 FSPQGSETIAEGKAHKYENLQVAQTLVAPASSPVEAESPTRTPGIRPVLTTPHPSAST 203
SPQ S + +P SSP+ + T P+LT P PS ST
Sbjct: 144 PSPQASSDLPA----------------SPTSSPLAPQQDTNV----PLLTPPSPSVST 181
>Medtr5g006940.1 | Lipid transfer protein | HC |
chr5:1143135-1141543 | 20130731
Length = 212
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 93/163 (57%), Gaps = 9/163 (5%)
Query: 28 HGQISTPCTTALMS-TFTPCANIITGSTNNGFAPPSTCCDSLRSLMNTNMDCACLVISAN 86
+ QI+TPC +++S T +PC + +T S+ NG +P + CC+++++L + + DC CL+ + N
Sbjct: 25 YAQITTPCNMSMISSTISPCLSFLTNSSGNGTSPTADCCNAIKTLTSGSKDCMCLIATGN 84
Query: 87 APLFQLPINQVLALSLSRACNINGIALQCKXXXXXXXXXXXXIFGSNNPTLPSSSAAPTF 146
P F LPIN+ LA+SL RACN+ G+ LQCK FG P+L S ++ P+
Sbjct: 85 VP-FALPINRTLAISLPRACNLPGVPLQCKTSGSPLPAPGPASFG---PSL-SPASTPSL 139
Query: 147 SPQGSETIAEGKAHKYENLQVAQTLVAPASSPVEAESPTRTPG 189
SPQ S + ++P+++P + P+ TPG
Sbjct: 140 SPQASSILPSPVTPSLSPQPETTNPLSPSANP---DIPSATPG 179