Miyakogusa Predicted Gene

Lj5g3v0998740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0998740.1 tr|A9SV66|A9SV66_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_188742,52.81,5e-19,no description,NULL; no
description,Galactose oxidase, beta-propeller; A Receptor for
Ubiquitination,NODE_61861_length_527_cov_40.925995.path2.1
         (89 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g095220.1 | kelch repeat F-box protein | HC | chr7:3810494...   164   1e-41
Medtr7g095220.2 | kelch repeat F-box protein | HC | chr7:3810459...   164   1e-41
Medtr3g073640.1 | galactose oxidase/kelch repeat protein | HC | ...    67   3e-12
Medtr2g008440.1 | galactose oxidase/kelch repeat protein | HC | ...    66   7e-12
Medtr8g085600.1 | galactose oxidase/kelch repeat protein | HC | ...    57   5e-09
Medtr8g085600.2 | galactose oxidase/kelch repeat protein | HC | ...    57   5e-09
Medtr4g114110.1 | galactose oxidase/kelch repeat protein | HC | ...    52   1e-07
Medtr2g019230.1 | kelch repeat F-box protein | HC | chr2:6225091...    52   1e-07
Medtr3g108860.1 | galactose oxidase/kelch repeat protein | HC | ...    50   4e-07
Medtr2g094093.1 | galactose oxidase/kelch repeat protein | HC | ...    49   7e-07
Medtr3g085570.1 | kelch repeat F-box protein | HC | chr3:3867536...    49   7e-07
Medtr3g085570.2 | kelch repeat F-box protein | HC | chr3:3867544...    49   7e-07
Medtr0345s0010.1 | galactose oxidase/kelch repeat protein | HC |...    49   1e-06
Medtr0105s0130.1 | galactose oxidase/kelch repeat protein | HC |...    49   1e-06
Medtr1330s0010.1 | galactose oxidase/kelch repeat protein | HC |...    49   1e-06
Medtr0105s0040.1 | galactose oxidase/kelch repeat protein | HC |...    49   2e-06
Medtr0105s0170.1 | galactose oxidase/kelch repeat protein | HC |...    48   2e-06
Medtr3g094850.1 | SKP1 interacting partner 6 | HC | chr3:4329199...    48   2e-06
Medtr2g102370.1 | galactose oxidase/kelch repeat protein | HC | ...    48   2e-06

>Medtr7g095220.1 | kelch repeat F-box protein | HC |
          chr7:38104949-38100131 | 20130731
          Length = 345

 Score =  164 bits (416), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 79/89 (88%), Positives = 84/89 (94%)

Query: 1  MSGLIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPELFKARKEVGSSEELLCV 60
          MS LIEGLPDAVAIRCLARVPFYLHPKLE+VSRSWQAAI SPEL K R+EV SSE+LLCV
Sbjct: 1  MSELIEGLPDAVAIRCLARVPFYLHPKLEVVSRSWQAAIHSPELSKIRQEVASSEDLLCV 60

Query: 61 CAFDPENLWQMYDPLRDLWITLPVLPSKI 89
          CAFDPEN+WQ+YDPLRDLWITLPVLPSKI
Sbjct: 61 CAFDPENVWQLYDPLRDLWITLPVLPSKI 89


>Medtr7g095220.2 | kelch repeat F-box protein | HC |
          chr7:38104594-38100131 | 20130731
          Length = 345

 Score =  164 bits (416), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 79/89 (88%), Positives = 84/89 (94%)

Query: 1  MSGLIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPELFKARKEVGSSEELLCV 60
          MS LIEGLPDAVAIRCLARVPFYLHPKLE+VSRSWQAAI SPEL K R+EV SSE+LLCV
Sbjct: 1  MSELIEGLPDAVAIRCLARVPFYLHPKLEVVSRSWQAAIHSPELSKIRQEVASSEDLLCV 60

Query: 61 CAFDPENLWQMYDPLRDLWITLPVLPSKI 89
          CAFDPEN+WQ+YDPLRDLWITLPVLPSKI
Sbjct: 61 CAFDPENVWQLYDPLRDLWITLPVLPSKI 89


>Medtr3g073640.1 | galactose oxidase/kelch repeat protein | HC |
           chr3:33212096-33209398 | 20130731
          Length = 478

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 2/88 (2%)

Query: 4   LIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPELFKARKEVGSSEELLCVCAF 63
           L   LPD V+I+ +AR+P   +  + +VSR W++ + S EL+K RKE+G++EE L +   
Sbjct: 43  LFPNLPDEVSIQIIARLPRICYFNVRMVSRKWKSTVTSSELYKVRKELGTTEEWLYLLVK 102

Query: 64  DPEN--LWQMYDPLRDLWITLPVLPSKI 89
             EN  LW   DP   +W  LP +P+ +
Sbjct: 103 LGENKLLWHAVDPRSRIWQRLPTMPNVV 130


>Medtr2g008440.1 | galactose oxidase/kelch repeat protein | HC |
           chr2:1477784-1476354 | 20130731
          Length = 476

 Score = 66.2 bits (160), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 2/88 (2%)

Query: 2   SGLIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPELFKARKEVGSSEELLCVC 61
           S LI  LPD ++ + LARVP   +  L+ VSR+W+AA+ S ELF  RKE+G++EE L + 
Sbjct: 41  SRLIPSLPDEISAQILARVPRIHYLNLKSVSRAWKAALASSELFCLRKELGTTEEWLYIL 100

Query: 62  AFDPEN--LWQMYDPLRDLWITLPVLPS 87
               +N  LW   DP+   W  LP +P+
Sbjct: 101 TKVNDNKLLWYALDPISGKWQRLPPMPN 128


>Medtr8g085600.1 | galactose oxidase/kelch repeat protein | HC |
           chr8:35465850-35460888 | 20130731
          Length = 437

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 2/87 (2%)

Query: 4   LIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPELFKARKEVGSSEELLCVCAF 63
           L+ GLPD +AI CL RVP   H KL LV + W   +     +  RK +G +EE + V   
Sbjct: 77  LLPGLPDDLAIACLIRVPRVEHRKLRLVCKRWYRLLSGNFFYSLRKSLGMAEEWVYVIKR 136

Query: 64  DPENLWQM--YDPLRDLWITLPVLPSK 88
           D E    +  +DP+  +W +LP +P +
Sbjct: 137 DREGKISLHAFDPIYQIWQSLPPVPGE 163


>Medtr8g085600.2 | galactose oxidase/kelch repeat protein | HC |
           chr8:35465987-35460831 | 20130731
          Length = 437

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 2/87 (2%)

Query: 4   LIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPELFKARKEVGSSEELLCVCAF 63
           L+ GLPD +AI CL RVP   H KL LV + W   +     +  RK +G +EE + V   
Sbjct: 77  LLPGLPDDLAIACLIRVPRVEHRKLRLVCKRWYRLLSGNFFYSLRKSLGMAEEWVYVIKR 136

Query: 64  DPENLWQM--YDPLRDLWITLPVLPSK 88
           D E    +  +DP+  +W +LP +P +
Sbjct: 137 DREGKISLHAFDPIYQIWQSLPPVPGE 163


>Medtr4g114110.1 | galactose oxidase/kelch repeat protein | HC |
           chr4:46975122-46976787 | 20130731
          Length = 442

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)

Query: 2   SGLIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPELFKARKEVGSSEELLCVC 61
           S L+ GLPD +AI CL RVP   H KL LV + W   +     +  RK +  +EE + V 
Sbjct: 79  SPLLPGLPDDLAIACLIRVPRVEHRKLRLVCKRWYRLLIGNFFYSLRKSLRLAEEWIYVI 138

Query: 62  AFDPENL--WQMYDPLRDLWITLPVLPSK 88
             D +    W  +DP+   W  LP +P +
Sbjct: 139 KRDRDGKISWHAFDPVYQQWQPLPPVPKE 167


>Medtr2g019230.1 | kelch repeat F-box protein | HC |
           chr2:6225091-6227537 | 20130731
          Length = 405

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 4/89 (4%)

Query: 4   LIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPE-LFKARKEVGSSEELLCVCA 62
           LI GLPD VA+ CL R+P   H     V + W   + + E  F  RK++G  +  L V A
Sbjct: 52  LIPGLPDDVALNCLLRLPVQSHSSCRAVCKRWHMLLGNKERFFTNRKQMGFKDPWLFVFA 111

Query: 63  FDP---ENLWQMYDPLRDLWITLPVLPSK 88
           +     +  WQ+ D     W T+P +P K
Sbjct: 112 YHKCTGKIQWQVLDLTHFSWHTIPAMPCK 140


>Medtr3g108860.1 | galactose oxidase/kelch repeat protein | HC |
           chr3:50318860-50321007 | 20130731
          Length = 346

 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 4/87 (4%)

Query: 4   LIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPELFKARKEVGSSEE----LLC 59
           LI GLP+ +A  CL  VP+   P +  VS SW  AI +P  F   K+  +       +L 
Sbjct: 17  LIPGLPNEIAEICLLHVPYPYQPLVRSVSSSWNRAITNPPSFLLSKKTKTLSHPHLFVLA 76

Query: 60  VCAFDPENLWQMYDPLRDLWITLPVLP 86
           V     +  WQ  DP  + W  LP +P
Sbjct: 77  VNTVTSKIQWQSLDPSSNRWFMLPSMP 103


>Medtr2g094093.1 | galactose oxidase/kelch repeat protein | HC |
           chr2:40117559-40120046 | 20130731
          Length = 364

 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 4   LIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPELFKARKEVGSSEELL-CVCA 62
           L+ GL D VA+ CLA V    H  L  +++ +   I S  L+  RKE+G  E L+  VC 
Sbjct: 20  LLPGLIDDVALNCLAWVGRSNHASLSCINKRYSRLISSGYLYGLRKELGVVEHLVYLVC- 78

Query: 63  FDPENLWQMYDPLRDLWITLPVLP 86
            DP   W  +DP    W+ LP +P
Sbjct: 79  -DPRG-WVAFDPTIGRWMALPKIP 100


>Medtr3g085570.1 | kelch repeat F-box protein | HC |
           chr3:38675365-38678791 | 20130731
          Length = 372

 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 3/87 (3%)

Query: 4   LIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPELFKARKEVGSSEELLCVCAF 63
           ++ GLPD VA  CLA VP    P +  VS+ W+  IRS E    RK  G  EE L     
Sbjct: 35  ILPGLPDDVAKYCLALVPRSNFPAMGGVSKKWRLFIRSKEFVMVRKLAGLLEEWLYCLTL 94

Query: 64  DP---ENLWQMYDPLRDLWITLPVLPS 87
           D    E+ W++ D L     +LP +P 
Sbjct: 95  DSEGRESHWEVMDSLGRKCRSLPPMPG 121


>Medtr3g085570.2 | kelch repeat F-box protein | HC |
           chr3:38675443-38678754 | 20130731
          Length = 372

 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 3/87 (3%)

Query: 4   LIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPELFKARKEVGSSEELLCVCAF 63
           ++ GLPD VA  CLA VP    P +  VS+ W+  IRS E    RK  G  EE L     
Sbjct: 35  ILPGLPDDVAKYCLALVPRSNFPAMGGVSKKWRLFIRSKEFVMVRKLAGLLEEWLYCLTL 94

Query: 64  DP---ENLWQMYDPLRDLWITLPVLPS 87
           D    E+ W++ D L     +LP +P 
Sbjct: 95  DSEGRESHWEVMDSLGRKCRSLPPMPG 121


>Medtr0345s0010.1 | galactose oxidase/kelch repeat protein | HC |
           scaffold0345:4629-3322 | 20130731
          Length = 435

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 4   LIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPELFKARKEVGSSEELLCVCAF 63
           L E L   ++I CL R+    +  +  +++S+++ IRS EL+K R++ G  E  +    F
Sbjct: 89  LSEHLGRDISIHCLLRLSRSDYGSIAAINKSFRSLIRSGELYKLRRKAGIVEHWV---YF 145

Query: 64  DPENL-WQMYDPLRDLWITLP 83
             E L W+ +DP R+ WI LP
Sbjct: 146 SSEALKWEAFDPNRNRWIHLP 166


>Medtr0105s0130.1 | galactose oxidase/kelch repeat protein | HC |
           scaffold0105:34350-35657 | 20130731
          Length = 435

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 4   LIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPELFKARKEVGSSEELLCVCAF 63
           L E L   ++I CL R+    +  +  +++S+++ IRS EL+K R++ G  E  +    F
Sbjct: 89  LSEHLGRDISIHCLLRLSRSDYGSIAAINKSFRSLIRSGELYKLRRKAGIVEHWV---YF 145

Query: 64  DPENL-WQMYDPLRDLWITLP 83
             E L W+ +DP R+ WI LP
Sbjct: 146 SSEALKWEAFDPNRNRWIHLP 166


>Medtr1330s0010.1 | galactose oxidase/kelch repeat protein | HC |
           scaffold1330:710-2036 | 20130731
          Length = 442

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 4   LIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPELFKARKEVGSSEELLCVCAF 63
           L E L   ++I CL R+    +  +  +++S+++ IRS EL+K R++ G  E  +    F
Sbjct: 102 LSEHLGRDISIHCLLRLSRSDYGSIAAINKSFRSLIRSGELYKLRRKAGIVEHWV---YF 158

Query: 64  DPENL-WQMYDPLRDLWITLP 83
             E L W+ +DP R+ WI LP
Sbjct: 159 SSEALKWEAFDPNRNRWIHLP 179


>Medtr0105s0040.1 | galactose oxidase/kelch repeat protein | HC |
           scaffold0105:12118-9517 | 20130731
          Length = 533

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 4   LIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPELFKARKEVGSSEELLCVCAF 63
           L E L   ++I CL R+    +  +  +++S+++ IRS EL+K R++ G  E       F
Sbjct: 187 LSEHLGRDISIHCLLRLSRSDYGSIAAINKSFRSLIRSGELYKLRRKAGIVEHW---AYF 243

Query: 64  DPENL-WQMYDPLRDLWITLP 83
             E L W+ +DP R+ WI LP
Sbjct: 244 SSEALKWEAFDPNRNRWIHLP 264


>Medtr0105s0170.1 | galactose oxidase/kelch repeat protein | HC |
           scaffold0105:47911-49257 | 20130731
          Length = 448

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 4   LIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPELFKARKEVGSSEELLCVCAF 63
           L E L   ++I CL R+    +  +  +++S+++ IRS EL+K R++ G  E       F
Sbjct: 102 LSEHLGRDISIHCLLRLSRSDYGSIAAINKSFRSLIRSGELYKLRRKAGIVEHW---AYF 158

Query: 64  DPENL-WQMYDPLRDLWITLP 83
             E L W+ +DP R+ WI LP
Sbjct: 159 SSEALKWEAFDPNRNRWIHLP 179


>Medtr3g094850.1 | SKP1 interacting partner 6 | HC |
          chr3:43291998-43294723 | 20130731
          Length = 356

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/57 (45%), Positives = 33/57 (57%)

Query: 2  SGLIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPELFKARKEVGSSEELL 58
          S LI  LPD VAI CLARVP   H  L LVS+   + + S   F AR  + S++ +L
Sbjct: 7  SNLIPSLPDDVAINCLARVPRSHHTTLTLVSKPIHSLLSSSLFFTARSLIPSTQHIL 63


>Medtr2g102370.1 | galactose oxidase/kelch repeat protein | HC |
          chr2:44080573-44078948 | 20130731
          Length = 364

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 4  LIEGLPDAVAIRCLARVPFYLHPKLELVSRSWQAAIRSPELFKARKEVGSSEELLCV--C 61
          LI  LP+ +A  CL RV +   P +  VS+ WQ  I++PE  + R+  G ++++L     
Sbjct: 3  LISCLPEDIARECLVRVSYQEFPAVATVSKGWQTEIQTPEFRRVRRSTGHAQKILVTVQS 62

Query: 62 AFDPEN 67
           FD E 
Sbjct: 63 KFDSEK 68