Miyakogusa Predicted Gene

Lj5g3v0998610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0998610.1 Non Characterized Hit- tr|I1JNW0|I1JNW0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50958
PE,63.16,0.0000000002, ,NODE_39624_length_518_cov_156.405411.path2.1
         (57 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g095160.1 | hypothetical protein | HC | chr7:38054345-3805...    75   1e-14
Medtr1g071810.1 | hypothetical protein | HC | chr1:31888975-3188...    50   4e-07
Medtr1g071810.2 | hypothetical protein | HC | chr1:31888756-3188...    50   4e-07

>Medtr7g095160.1 | hypothetical protein | HC |
          chr7:38054345-38057190 | 20130731
          Length = 195

 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/55 (65%), Positives = 41/55 (74%), Gaps = 1/55 (1%)

Query: 1  MEMLVVAQHRSKSQGHGGFGYPSPSRHFRGMNCRAFQTGSGILPTPLKSCTTPEP 55
          M  LVV QHR++SQ H  FG  SPS+ FRG+NCR FQTG GILPTP KS T+P P
Sbjct: 1  MVTLVVPQHRNQSQEHARFGS-SPSKQFRGINCRTFQTGYGILPTPFKSTTSPSP 54


>Medtr1g071810.1 | hypothetical protein | HC |
          chr1:31888975-31886676 | 20130731
          Length = 266

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 7/49 (14%)

Query: 1  MEMLVVAQHRSKSQGHGGFGYPSPSRHFRGMNCRAFQTGSGILPTPLKS 49
          ME LVV +   K+Q H      +PSR F G+NCR F++G G+LPTPL+S
Sbjct: 1  METLVVVEQH-KNQDH------APSRDFIGINCRTFESGYGVLPTPLRS 42


>Medtr1g071810.2 | hypothetical protein | HC |
          chr1:31888756-31886676 | 20130731
          Length = 266

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 7/49 (14%)

Query: 1  MEMLVVAQHRSKSQGHGGFGYPSPSRHFRGMNCRAFQTGSGILPTPLKS 49
          ME LVV +   K+Q H      +PSR F G+NCR F++G G+LPTPL+S
Sbjct: 1  METLVVVEQH-KNQDH------APSRDFIGINCRTFESGYGVLPTPLRS 42