Miyakogusa Predicted Gene

Lj5g3v0977300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0977300.1 Non Characterized Hit- tr|A5BG99|A5BG99_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,58.62,2e-18,F-box-like,NULL; no description,NULL; F-BOX/LRR
PROTEIN-RELATED, ARATH,NULL; F-BOX/LEUCINE RICH REP,CUFF.54468.1
         (530 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g095030.1 | F-box protein SKIP2 | HC | chr7:37984180-37989...   668   0.0  
Medtr7g095030.2 | F-box protein SKIP2 | HC | chr7:37984180-37989...   618   e-177
Medtr7g095030.3 | F-box protein SKIP2 | HC | chr7:37984180-37989...   618   e-177
Medtr4g095000.1 | F-box protein, putative | HC | chr4:39476733-3...   506   e-143
Medtr7g094400.1 | hypothetical protein | LC | chr7:37580210-3757...    68   2e-11

>Medtr7g095030.1 | F-box protein SKIP2 | HC | chr7:37984180-37989655
           | 20130731
          Length = 510

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/458 (74%), Positives = 374/458 (81%), Gaps = 15/458 (3%)

Query: 73  TELIDRALKIGSMLLDAAKQSSRKRASKHNSIAWPLPPDLTIKVFSALDTQSLCYASATC 132
           T+LIDRALK+GS+LLDAAK SSRKRA  HNSI WPLPPDLT K+FS LDTQSLC+ SA C
Sbjct: 68  TDLIDRALKMGSLLLDAAKHSSRKRAYNHNSIVWPLPPDLTFKIFSMLDTQSLCFVSAAC 127

Query: 133 TLFNKCAKDPLCYENLDLTTLVPKVNNSVVSTMIQRAGKALRSLKLGVIPGATPSPGCCQ 192
           + F+KCAKDPLCYENLDL TLVPKVNN+VV+TMIQRAGKALRS+KLGV+P      G CQ
Sbjct: 128 SFFSKCAKDPLCYENLDLRTLVPKVNNAVVATMIQRAGKALRSIKLGVVPVTACPLGFCQ 187

Query: 193 PLVCPIRNAIVDVSNFSWTDKRSRQGRESSILTRSCLSPLSRDVXXXXXXXXXXXXXXYN 252
           P V  +R AIV+  N+SW DKRSRQGRESSILTR CLSPLS D               YN
Sbjct: 188 PSVSTVRKAIVEAPNYSWNDKRSRQGRESSILTRCCLSPLSGD--GGAPGALLRKLHLYN 245

Query: 253 IERMDNVSLSGALSACPSLLDLEIVGLHVELRLTLMSVSAHYHLIERLFFESSKTGRDDS 312
           IERMDN SL  ALSACPSLLDLEIVG+HVELR TLMSVSA+ HLIERLFFESS+TGRDDS
Sbjct: 246 IERMDNTSLCCALSACPSLLDLEIVGIHVELRQTLMSVSANCHLIERLFFESSRTGRDDS 305

Query: 313 LKTQTCVELVDNCPHLTSLSLRGFKLHDYKVRVLVKGFRKLKYVNFSTSYSITGSFLRNL 372
           LKTQTC ELV+NCPHLTSLSLRGFKLHD KVR+LVKGFRKL+YV+FS+SYSITGSFLRNL
Sbjct: 306 LKTQTCSELVNNCPHLTSLSLRGFKLHDCKVRILVKGFRKLQYVDFSSSYSITGSFLRNL 365

Query: 373 GSYNGGNSLEALILRDCMHLKEVEVARLLTAILAGDFKSLLHLDISNREGLASEGDWYHR 432
           G  NGGN LE LILRDCMHLKE+EVARLL A+L G+FK L HLDISNREGLA E DWYHR
Sbjct: 366 GGCNGGNFLEVLILRDCMHLKEIEVARLLIAVLEGEFKLLKHLDISNREGLACEADWYHR 425

Query: 433 CYNSSIMPVKQVLEARPDMCLVAEYPQEGSYMDSFDTDMNSEISLPSQLSFHSSDGLVFL 492
           CYNSSIMP+KQVLEARP M +VAEYP EG           S+ISL SQ S H+SDG +F+
Sbjct: 426 CYNSSIMPIKQVLEARPGMRVVAEYPSEG-----------SDISLLSQFSNHTSDGSIFM 474

Query: 493 STSESSYNSDHGSGNEDGQEANYVIYEGSSDEIDFLSL 530
           STSESSY SDH SGNE+GQ+A  VIY  SSDE + L+L
Sbjct: 475 STSESSYYSDHVSGNEEGQDA--VIYGESSDEENNLNL 510


>Medtr7g095030.2 | F-box protein SKIP2 | HC | chr7:37984180-37989463
           | 20130731
          Length = 457

 Score =  618 bits (1593), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 303/392 (77%), Positives = 331/392 (84%), Gaps = 2/392 (0%)

Query: 73  TELIDRALKIGSMLLDAAKQSSRKRASKHNSIAWPLPPDLTIKVFSALDTQSLCYASATC 132
           T+LIDRALK+GS+LLDAAK SSRKRA  HNSI WPLPPDLT K+FS LDTQSLC+ SA C
Sbjct: 68  TDLIDRALKMGSLLLDAAKHSSRKRAYNHNSIVWPLPPDLTFKIFSMLDTQSLCFVSAAC 127

Query: 133 TLFNKCAKDPLCYENLDLTTLVPKVNNSVVSTMIQRAGKALRSLKLGVIPGATPSPGCCQ 192
           + F+KCAKDPLCYENLDL TLVPKVNN+VV+TMIQRAGKALRS+KLGV+P      G CQ
Sbjct: 128 SFFSKCAKDPLCYENLDLRTLVPKVNNAVVATMIQRAGKALRSIKLGVVPVTACPLGFCQ 187

Query: 193 PLVCPIRNAIVDVSNFSWTDKRSRQGRESSILTRSCLSPLSRDVXXXXXXXXXXXXXXYN 252
           P V  +R AIV+  N+SW DKRSRQGRESSILTR CLSPLS D               YN
Sbjct: 188 PSVSTVRKAIVEAPNYSWNDKRSRQGRESSILTRCCLSPLSGD--GGAPGALLRKLHLYN 245

Query: 253 IERMDNVSLSGALSACPSLLDLEIVGLHVELRLTLMSVSAHYHLIERLFFESSKTGRDDS 312
           IERMDN SL  ALSACPSLLDLEIVG+HVELR TLMSVSA+ HLIERLFFESS+TGRDDS
Sbjct: 246 IERMDNTSLCCALSACPSLLDLEIVGIHVELRQTLMSVSANCHLIERLFFESSRTGRDDS 305

Query: 313 LKTQTCVELVDNCPHLTSLSLRGFKLHDYKVRVLVKGFRKLKYVNFSTSYSITGSFLRNL 372
           LKTQTC ELV+NCPHLTSLSLRGFKLHD KVR+LVKGFRKL+YV+FS+SYSITGSFLRNL
Sbjct: 306 LKTQTCSELVNNCPHLTSLSLRGFKLHDCKVRILVKGFRKLQYVDFSSSYSITGSFLRNL 365

Query: 373 GSYNGGNSLEALILRDCMHLKEVEVARLLTAILAGDFKSLLHLDISNREGLASEGDWYHR 432
           G  NGGN LE LILRDCMHLKE+EVARLL A+L G+FK L HLDISNREGLA E DWYHR
Sbjct: 366 GGCNGGNFLEVLILRDCMHLKEIEVARLLIAVLEGEFKLLKHLDISNREGLACEADWYHR 425

Query: 433 CYNSSIMPVKQVLEARPDMCLVAEYPQEGSYM 464
           CYNSSIMP+KQVLEARP M +VAEYP EGSY+
Sbjct: 426 CYNSSIMPIKQVLEARPGMRVVAEYPSEGSYV 457


>Medtr7g095030.3 | F-box protein SKIP2 | HC | chr7:37984180-37989463
           | 20130731
          Length = 457

 Score =  618 bits (1593), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 303/392 (77%), Positives = 331/392 (84%), Gaps = 2/392 (0%)

Query: 73  TELIDRALKIGSMLLDAAKQSSRKRASKHNSIAWPLPPDLTIKVFSALDTQSLCYASATC 132
           T+LIDRALK+GS+LLDAAK SSRKRA  HNSI WPLPPDLT K+FS LDTQSLC+ SA C
Sbjct: 68  TDLIDRALKMGSLLLDAAKHSSRKRAYNHNSIVWPLPPDLTFKIFSMLDTQSLCFVSAAC 127

Query: 133 TLFNKCAKDPLCYENLDLTTLVPKVNNSVVSTMIQRAGKALRSLKLGVIPGATPSPGCCQ 192
           + F+KCAKDPLCYENLDL TLVPKVNN+VV+TMIQRAGKALRS+KLGV+P      G CQ
Sbjct: 128 SFFSKCAKDPLCYENLDLRTLVPKVNNAVVATMIQRAGKALRSIKLGVVPVTACPLGFCQ 187

Query: 193 PLVCPIRNAIVDVSNFSWTDKRSRQGRESSILTRSCLSPLSRDVXXXXXXXXXXXXXXYN 252
           P V  +R AIV+  N+SW DKRSRQGRESSILTR CLSPLS D               YN
Sbjct: 188 PSVSTVRKAIVEAPNYSWNDKRSRQGRESSILTRCCLSPLSGD--GGAPGALLRKLHLYN 245

Query: 253 IERMDNVSLSGALSACPSLLDLEIVGLHVELRLTLMSVSAHYHLIERLFFESSKTGRDDS 312
           IERMDN SL  ALSACPSLLDLEIVG+HVELR TLMSVSA+ HLIERLFFESS+TGRDDS
Sbjct: 246 IERMDNTSLCCALSACPSLLDLEIVGIHVELRQTLMSVSANCHLIERLFFESSRTGRDDS 305

Query: 313 LKTQTCVELVDNCPHLTSLSLRGFKLHDYKVRVLVKGFRKLKYVNFSTSYSITGSFLRNL 372
           LKTQTC ELV+NCPHLTSLSLRGFKLHD KVR+LVKGFRKL+YV+FS+SYSITGSFLRNL
Sbjct: 306 LKTQTCSELVNNCPHLTSLSLRGFKLHDCKVRILVKGFRKLQYVDFSSSYSITGSFLRNL 365

Query: 373 GSYNGGNSLEALILRDCMHLKEVEVARLLTAILAGDFKSLLHLDISNREGLASEGDWYHR 432
           G  NGGN LE LILRDCMHLKE+EVARLL A+L G+FK L HLDISNREGLA E DWYHR
Sbjct: 366 GGCNGGNFLEVLILRDCMHLKEIEVARLLIAVLEGEFKLLKHLDISNREGLACEADWYHR 425

Query: 433 CYNSSIMPVKQVLEARPDMCLVAEYPQEGSYM 464
           CYNSSIMP+KQVLEARP M +VAEYP EGSY+
Sbjct: 426 CYNSSIMPIKQVLEARPGMRVVAEYPSEGSYV 457


>Medtr4g095000.1 | F-box protein, putative | HC |
           chr4:39476733-39472979 | 20130731
          Length = 429

 Score =  506 bits (1304), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 259/356 (72%), Positives = 289/356 (81%), Gaps = 4/356 (1%)

Query: 175 SLKLGVIPGATPSPGCCQPLVCPIRNAIVDVSNFSWTDKRSRQGRESSILTRSCLSPLSR 234
           S+KLGV+P      G CQP V  +R AIV+  N+SW DKRSRQGRESSILTR CLSPLS 
Sbjct: 78  SIKLGVVPVTACPLGFCQPSVSTVRKAIVEAPNYSWNDKRSRQGRESSILTRCCLSPLSG 137

Query: 235 DVXXXXXXXXXXXXXXYNIERMDNVSLSGALSACPSLLDLEIVGLHVELRLTLMSVSAHY 294
           D               YNIERMDN SL  ALSACPSLLDLEIVG+HVELR TLMSVSA+ 
Sbjct: 138 D--GGAPGALLRKLHLYNIERMDNTSLCCALSACPSLLDLEIVGIHVELRQTLMSVSANC 195

Query: 295 HLIERLFFESSKTGRDDSLKTQTCVELVDNCPHLTSLSLRGFKLHDYKVRVLVKGFRKLK 354
           HLIERLFFESS+TGRDDSLKTQTC ELV+NCPHLTSLSLRGFKLHD KVR+LVKGFRKL+
Sbjct: 196 HLIERLFFESSRTGRDDSLKTQTCSELVNNCPHLTSLSLRGFKLHDCKVRILVKGFRKLQ 255

Query: 355 YVNFSTSYSITGSFLRNLGSYNGGNSLEALILRDCMHLKEVEVARLLTAILAGDFKSLLH 414
           YV+FS+SYSITGSFL+NLG  NGGN LE LILRDCMHLKE+EVARLL A+L G+FK L H
Sbjct: 256 YVDFSSSYSITGSFLKNLGGCNGGNFLEVLILRDCMHLKEIEVARLLIAVLEGEFKLLKH 315

Query: 415 LDISNREGLASEGDWYHRCYNSSIMPVKQVLEARPDMCLVAEYPQEGSYMDSFDTDMNSE 474
           LDISNREGLA E DWY RCYNS+IMP+KQVLEARP M +VAEYP EGSY+ + DTDMNS+
Sbjct: 316 LDISNREGLACEADWYRRCYNSTIMPIKQVLEARPGMRVVAEYPSEGSYVKTCDTDMNSD 375

Query: 475 ISLPSQLSFHSSDGLVFLSTSESSYNSDHGSGNEDGQEANYVIYEGSSDEIDFLSL 530
           ISL SQ S H+SDG +F+STSESSY SDH SG E+GQ+A  VIY  SSDE + L+L
Sbjct: 376 ISLLSQFSNHTSDGSIFMSTSESSYYSDHVSGKEEGQDA--VIYGESSDEENNLNL 429


>Medtr7g094400.1 | hypothetical protein | LC |
           chr7:37580210-37578283 | 20130731
          Length = 116

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/54 (62%), Positives = 39/54 (72%)

Query: 134 LFNKCAKDPLCYENLDLTTLVPKVNNSVVSTMIQRAGKALRSLKLGVIPGATPS 187
           L +KCAK PLCYENL L TL+P+VNN+VV+TMIQR GKALR   L       PS
Sbjct: 30  LVSKCAKYPLCYENLHLRTLLPRVNNAVVATMIQRVGKALRYEILDCTDCVIPS 83