Miyakogusa Predicted Gene

Lj5g3v0976250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0976250.1 Non Characterized Hit- tr|K4CVG0|K4CVG0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,34.35,6e-18,seg,NULL,CUFF.54476.1
         (770 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g072160.1 | TIME FOR coffee-like protein, putative | HC | ...   775   0.0  
Medtr1g104710.1 | TIME FOR coffee-like protein, putative | HC | ...    67   6e-11

>Medtr1g072160.1 | TIME FOR coffee-like protein, putative | HC |
            chr1:32016258-32010788 | 20130731
          Length = 1199

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/800 (58%), Positives = 532/800 (66%), Gaps = 45/800 (5%)

Query: 1    MMLSLEGDDLSKSQLTSETKALAPDVEMKRIDSIEVEDKAERPVNQEKTPEEIEE-ANMI 59
            MMLS +G+DLS+  LTS +  LAPD+EMKR +SI+VEDK ER    EK PEEIEE ANM 
Sbjct: 330  MMLSPKGNDLSRGNLTSASIKLAPDLEMKRENSIKVEDKVERQATVEKNPEEIEEEANMA 389

Query: 60   EFKKKLNVLKHDLVTPNNDNDIMTNNKLEKQDRNKEQPSISSNPKVQKIDHSSSVPLPAG 119
                 +NVLKH L  PNNDNDI  NNKLE+Q RNKEQP   SNPKV+K   SSSVPLPA 
Sbjct: 390  ----TMNVLKHYLEKPNNDNDIKINNKLEEQGRNKEQPIALSNPKVEKTACSSSVPLPAA 445

Query: 120  VSGRPSNLTSIG-------CKPLLQKVGETDKTKGGSSKSPQGVNSVLSQPKRKRCATHY 172
            VSG PS+L+ IG       C P LQ V + + T G SS S Q VN  LS+P+ KRCATHY
Sbjct: 446  VSGLPSSLSPIGSITMTGGCTPPLQTVVKMNTTTG-SSTSAQRVNFALSEPQPKRCATHY 504

Query: 173  YIARNILHQQYTKMSPPLPAAIGPGSLCGIKPNNVDCVPSS-----SKQSQKHFPGVNQK 227
             IAR IL +Q+TKM+P L AAIG GSLC  K NNV+C+ S+     +KQSQKH P ++Q 
Sbjct: 505  QIARKILLKQFTKMNPLLSAAIGSGSLCAPKTNNVNCLLSAESMIINKQSQKHLPSLDQN 564

Query: 228  GAQEKVLVATSDPSLAAFRSSNNANPMDSTHMQLVLQQGPYPGSIGTLV-GPAFVFGPGQ 286
            G QEK L    D +L A ++SNN NP+DS H   +LQQGP+ GS G LV GPAFVF P  
Sbjct: 565  GTQEKRLTVIGDHNLTATKNSNNPNPVDSIHQMHLLQQGPFAGSTGNLVHGPAFVFSPAH 624

Query: 287  HQASVAAPTNQAGGVNFPXXXXXXXXXXXXVAGSLDTSSTLPAAAAA--MSCSYPKFSAN 344
            +QASVAA TNQAGGV+ P            VAGS  T+STLPA A A  MS SYP FSAN
Sbjct: 625  YQASVAAATNQAGGVSSPNNTSSYNRSQSSVAGSPCTTSTLPATAIANAMSFSYPHFSAN 684

Query: 345  DSPYVTIVSNNGYSFPYS------TAVIRGVSP-------GGPFYSSQILHPLQYPQQHP 391
            +SPY T+V NNGYSFP S      TA IR  S        GGP YSSQ  H LQYPQQHP
Sbjct: 685  NSPYATLVHNNGYSFPVSSSSLGATAAIRNASSAQTTHILGGPLYSSQTFHSLQYPQQHP 744

Query: 392  HSKVLVQPSYPNAXXXXXXXXHKQSQGAQGNGNNIMTSKTREQPSQKQRTPQSHPRKHEV 451
            HS+  VQPSY             Q  GAQ NGN+I+TS T E+ SQKQ T QSHP K E 
Sbjct: 745  HSQAHVQPSYLTTQTSSSSSSQMQPHGAQVNGNSILTSTTAERRSQKQHTLQSHPHKQET 804

Query: 452  VVGGENVPSVANRTSYAQKNVHGQNFTIPVQPMNLSFKPSATSDKAGGNSGIFADKQQKQ 511
             V G+NVPSVAN TS   KN+ GQNFTIPVQP+N SFKP ATSD  GGNSG F DKQQ  
Sbjct: 805  EVNGKNVPSVANLTSCPLKNLQGQNFTIPVQPVNFSFKPCATSDSVGGNSGNFGDKQQ-- 862

Query: 512  QASKGGVEIVPSQAFAVSFATFNGTSVPSSLNFSSMAQNPQILHSLPDIAYQGYPAASTP 571
            QA KGGVE++PSQ FAVSF +FNGT++PS+LNFSSM QNP ++ SLPD+A QGY AAST 
Sbjct: 863  QALKGGVEVIPSQPFAVSFGSFNGTNLPSNLNFSSMKQNPLVIQSLPDVARQGYQAASTS 922

Query: 572  YTTQQKTCSITGDKSGGNSSQQDDVKKITHGKSPTIGPTTLVFDNSSKNQNFVMSSTSGN 631
            +  QQK  S T +K GGNSS +DD KK THGKS   GPTTLVFDNSSKN NFV+S ++GN
Sbjct: 923  HIVQQKNYSTTIEKRGGNSSHKDDEKKTTHGKSSANGPTTLVFDNSSKNINFVLSHSNGN 982

Query: 632  WPSGAIASTAIINMPFSGNASGXXXXXXXXXXXX---XXXXRPAMSTRKKA-----LSAT 683
            WPS +I ST    MPFS N S                    +PA +TR KA      SAT
Sbjct: 983  WPSHSITSTVTTTMPFSSNTSSSQQSAQSLQLHKQHGMQQQQPAAATRNKASSTNTTSAT 1042

Query: 684  KFAMDTPVLSQSLAQCKSSNQNSLSKTLGRTTASHVHHKSIITSSAPTVKSLPQEKGRDS 743
             FA + PV SQS  QC SSNQ S SK  GRTT+ HVHH    T   PT K+   EKGR S
Sbjct: 1043 NFANNGPVFSQSHTQCNSSNQTSHSKITGRTTSYHVHHTPSTTIKTPTTKN-DLEKGRFS 1101

Query: 744  KGHKQISFGGNYTTSLPTQG 763
            +G  QISFGGNYTTSLP+QG
Sbjct: 1102 QGRMQISFGGNYTTSLPSQG 1121


>Medtr1g104710.1 | TIME FOR coffee-like protein, putative | HC |
            chr1:47174909-47167865 | 20130731
          Length = 1554

 Score = 67.4 bits (163), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 91/174 (52%), Gaps = 11/174 (6%)

Query: 447  RKHEVVVGGENVPSVAN-RTSYAQKNVHGQNFTIPVQPMNLSFKPSATSDKAGGNSGIFA 505
            R+ E  +G E+ PS A+ R + A  N++GQNF +P+Q  N +   +A S    G++G  +
Sbjct: 978  RQVESEMGCEDSPSTADSRHNRATMNIYGQNFAMPMQTPNFALMTTAMS--GAGSNGNHS 1035

Query: 506  DKQQKQQ--ASKGGVEIVPSQAFAVSFATFNGTSVPSSLNFSSMAQNPQILHSLPDIAYQ 563
            +K+Q+QQ   SK G E  P  AFA+ F +  G    ++L+ SS+AQN  I+ S  +    
Sbjct: 1036 EKKQQQQHPGSKAGGETSP--AFAMPFPSITGA---TALDLSSIAQNHSIMQSSHNFQLM 1090

Query: 564  GYPAASTPYTTQQKTCSITGDKSGGNSSQQDDVKKITHGKSPTIGPTTLVFDNS 617
                A++    +    +  G     +S+ ++D K I+ GK PT G   + F  S
Sbjct: 1091 ATAQAASAQLKKSYHAAEEGKHVVNSSNLEEDRKAIS-GKIPTTGGQNIAFARS 1143