Miyakogusa Predicted Gene

Lj5g3v0962850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0962850.1 Non Characterized Hit- tr|I3SI57|I3SI57_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.66,0,Diaminopimelate epimerase-like,NULL; PhzF_family:
phenazine biosynthesis protein, PhzF ,Phenazine bi,CUFF.54447.1
         (295 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g072490.1 | phenazine biosynthesis PhzC/PhzF family protei...   457   e-129
Medtr1g072500.1 | phenazine biosynthesis PhzC/PhzF family protei...   448   e-126
Medtr1g072470.1 | phenazine biosynthesis PhzC/PhzF family protei...   446   e-125
Medtr1g062500.1 | phenazine biosynthesis PhzC/PhzF family protei...   415   e-116
Medtr4g107220.1 | phenazine biosynthesis PhzC/PhzF family protei...   411   e-115
Medtr1g062540.1 | phenazine biosynthesis PhzC/PhzF family protei...   402   e-112
Medtr1g072490.2 | phenazine biosynthesis PhzC/PhzF family protei...   347   9e-96
Medtr1g062530.1 | phenazine biosynthesis PhzC/PhzF family protei...   311   5e-85
Medtr1g062440.1 | phenazine biosynthesis protein | LC | chr1:272...   174   6e-44
Medtr1g062510.1 | phenazine biosynthesis PhzC/PhzF family protei...    95   8e-20

>Medtr1g072490.1 | phenazine biosynthesis PhzC/PhzF family protein |
           HC | chr1:32165650-32163306 | 20130731
          Length = 293

 Score =  457 bits (1175), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 222/295 (75%), Positives = 249/295 (84%), Gaps = 2/295 (0%)

Query: 1   MASKPVKYYVVDAFTESAFKGNPAAVCLLEEDKDDDWLQAVAAEFNISETCFLTRIDGTS 60
           MA K VKYYVVDAFT+SAFKGNPAAVCLLEEDKDD+WLQ+VAAEFNISETC+LT I GTS
Sbjct: 1   MAKKHVKYYVVDAFTDSAFKGNPAAVCLLEEDKDDEWLQSVAAEFNISETCYLTSIHGTS 60

Query: 61  NPRFGLRWFTPVVEVNLCGHATLAAAHILFSSGLVKTNVIEFVTLSGILTVKKIPAVNAT 120
            PRFGLRWFTPVVEVNLCGHATLAAAH LFSSGLV  NVIEFVTLSG+LTV+KIP+++ T
Sbjct: 61  IPRFGLRWFTPVVEVNLCGHATLAAAHTLFSSGLVDKNVIEFVTLSGVLTVRKIPSMDVT 120

Query: 121 NGTNLQKSEAKDGFYIELDFPADHIIESNFDGTARISGALNGAPIIDIKSTQNSEDFLVE 180
              NL  SEA  GFYIE+DFPA  + E N D T+ IS A NGA IIDIK T   ED LV 
Sbjct: 121 GVPNLLNSEAAAGFYIEMDFPAYPVAEFNSDDTSLISEATNGASIIDIKKT--GEDLLVV 178

Query: 181 LASREDVIAVQPQLDAMVKFPGRGVIVSAIAPPESGFDFYSRFFCPKFGVDEDPVCGTAH 240
           +AS ++V  +QPQLDA+ K PGRG+IV+ IAPPESGFDFYSRFF PKFG++EDPVCG+AH
Sbjct: 179 VASGKNVTEIQPQLDAIAKLPGRGLIVTGIAPPESGFDFYSRFFAPKFGINEDPVCGSAH 238

Query: 241 CALASYWSKKLGKCDFIANQASPRGGILHIHLDEENQRVFLRGKAVTVMEGCVLV 295
           C LASYWSKKL KCD  A QAS RGG+L+IH+DE+ QRVFLRGKA+TVMEGCVLV
Sbjct: 239 CGLASYWSKKLEKCDLKAYQASTRGGVLNIHIDEQKQRVFLRGKAITVMEGCVLV 293


>Medtr1g072500.1 | phenazine biosynthesis PhzC/PhzF family protein |
           HC | chr1:32169481-32166295 | 20130731
          Length = 292

 Score =  448 bits (1153), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 220/295 (74%), Positives = 242/295 (82%), Gaps = 3/295 (1%)

Query: 1   MASKPVKYYVVDAFTESAFKGNPAAVCLLEEDKDDDWLQAVAAEFNISETCFLTRIDGTS 60
           MA KPVKYYVVDAFT+SAFKGNPAAVCLLEEDKDD+WLQ VAAEFNISETC+LT I GTS
Sbjct: 1   MAKKPVKYYVVDAFTDSAFKGNPAAVCLLEEDKDDEWLQLVAAEFNISETCYLTPIHGTS 60

Query: 61  NPRFGLRWFTPVVEVNLCGHATLAAAHILFSSGLVKTNVIEFVTLSGILTVKKIPAVNAT 120
            PRFGLRWFTPV EVNLCGHATLAAAH L SSGLV  N IEFVT SGILT K+    + T
Sbjct: 61  IPRFGLRWFTPVAEVNLCGHATLAAAHTLLSSGLVDKNAIEFVTRSGILTAKR---TDVT 117

Query: 121 NGTNLQKSEAKDGFYIELDFPADHIIESNFDGTARISGALNGAPIIDIKSTQNSEDFLVE 180
           +  NLQ  EA  GFYIELDFPAD I E N + T+ ISGALNGA IIDIK T N ++ LV 
Sbjct: 118 SALNLQNGEAPVGFYIELDFPADPIAEFNSNDTSLISGALNGASIIDIKRTTNGDNLLVL 177

Query: 181 LASREDVIAVQPQLDAMVKFPGRGVIVSAIAPPESGFDFYSRFFCPKFGVDEDPVCGTAH 240
           + S E+V  VQPQ DA+VK PG G+IV+ IAPPESGFDFYSR+FCPK G++EDPVCG+AH
Sbjct: 178 VTSGENVTEVQPQFDAIVKCPGMGIIVTGIAPPESGFDFYSRYFCPKHGINEDPVCGSAH 237

Query: 241 CALASYWSKKLGKCDFIANQASPRGGILHIHLDEENQRVFLRGKAVTVMEGCVLV 295
           C LA YWSKKLGKCD  A QAS RGGIL+IH+DE+ QRVFLRGKAVTVMEG VLV
Sbjct: 238 CGLAPYWSKKLGKCDLKAYQASARGGILNIHIDEQKQRVFLRGKAVTVMEGSVLV 292


>Medtr1g072470.1 | phenazine biosynthesis PhzC/PhzF family protein |
           HC | chr1:32158503-32156071 | 20130731
          Length = 299

 Score =  446 bits (1146), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 217/297 (73%), Positives = 248/297 (83%), Gaps = 2/297 (0%)

Query: 1   MASKPVKYYVVDAFTESAFKGNPAAVCLLEEDKDDDWLQAVAAEFNISETCFLTRIDGTS 60
           M+ KPVKYYVVDAFTE AFKGNPAAVCLL+++KDD+WLQ +AAEFNI+ TC+L  + GT+
Sbjct: 3   MSEKPVKYYVVDAFTELAFKGNPAAVCLLDQEKDDEWLQVLAAEFNINVTCYLIPVKGTT 62

Query: 61  NPRFGLRWFTPVVEVNLCGHATLAAAHILFSSGLVKTNV-IEFVTLSGILTVKKIPAVNA 119
           NPRF LRWFTP+VEVN+C HATLAA+H LF+SGLV  NV IEFVTLSG+LT KKI A+N 
Sbjct: 63  NPRFRLRWFTPIVEVNICAHATLAASHALFASGLVDNNVTIEFVTLSGMLTAKKISAING 122

Query: 120 T-NGTNLQKSEAKDGFYIELDFPADHIIESNFDGTARISGALNGAPIIDIKSTQNSEDFL 178
           T +  NLQ  +AKD  YIELDFPAD I E  FD T  IS AL+GA IIDIK TQ  +D L
Sbjct: 123 TSDKKNLQNGKAKDVSYIELDFPADPITEFKFDDTWLISQALDGASIIDIKRTQIQDDLL 182

Query: 179 VELASREDVIAVQPQLDAMVKFPGRGVIVSAIAPPESGFDFYSRFFCPKFGVDEDPVCGT 238
           V + S ++VI VQPQ DA+VK PGRG+IV+ IAPPESGFDFYSRFFCPKFGV+EDPVCG+
Sbjct: 183 VVVTSGKNVIEVQPQFDAIVKSPGRGIIVTGIAPPESGFDFYSRFFCPKFGVNEDPVCGS 242

Query: 239 AHCALASYWSKKLGKCDFIANQASPRGGILHIHLDEENQRVFLRGKAVTVMEGCVLV 295
           AHC LASYWSKKLGKCD  A QAS RGGIL+IH+DE+ QRVFLRGKAVTVMEGCVLV
Sbjct: 243 AHCGLASYWSKKLGKCDLKAYQASARGGILNIHIDEQKQRVFLRGKAVTVMEGCVLV 299


>Medtr1g062500.1 | phenazine biosynthesis PhzC/PhzF family protein |
           LC | chr1:27325491-27319297 | 20130731
          Length = 297

 Score =  415 bits (1066), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/297 (68%), Positives = 238/297 (80%), Gaps = 2/297 (0%)

Query: 1   MASKPVKYYVVDAFTESAFKGNPAAVCLLEEDKDDDWLQAVAAEFNISETCFLTRIDGTS 60
           MA KPVKYYVVDAFTE+ FKGNPAAVC LEEDKDD+WLQA+AAEFN+S+TC+LT I GTS
Sbjct: 1   MAKKPVKYYVVDAFTETVFKGNPAAVCFLEEDKDDEWLQALAAEFNVSQTCYLTPIHGTS 60

Query: 61  NPRFGLRWFTPVVEVNLCGHATLAAAHILFSSGLVKTNVIEFVTLSGILTVKKIPAVNAT 120
            PRFGLRWFTP VEVNLCGHATLAA+HILFSS LV  +VIEFVTLSG+LTVKKIP+++  
Sbjct: 61  IPRFGLRWFTPTVEVNLCGHATLAASHILFSSDLVNNSVIEFVTLSGVLTVKKIPSIDVV 120

Query: 121 NGTNLQKSEAKD-GFYIELDFPADHIIESNF-DGTARISGALNGAPIIDIKSTQNSEDFL 178
              NL   +A    FYIELDFPA + I   + D  + I  ALNGA IID+K T+ ++D L
Sbjct: 121 GVPNLLNGKAPPVEFYIELDFPAYYPITKLYHDDISIIDEALNGASIIDMKRTEFADDLL 180

Query: 179 VELASREDVIAVQPQLDAMVKFPGRGVIVSAIAPPESGFDFYSRFFCPKFGVDEDPVCGT 238
           V + S ++V+ VQPQ DA+ K  GRGV V+ IAPPESGFDFYSRFF PKFG++EDPVCGT
Sbjct: 181 VVVTSGKNVLEVQPQFDALAKLSGRGVSVTGIAPPESGFDFYSRFFSPKFGINEDPVCGT 240

Query: 239 AHCALASYWSKKLGKCDFIANQASPRGGILHIHLDEENQRVFLRGKAVTVMEGCVLV 295
           AHC LA YWS+KLGKCD  A  AS RGG L+IH+D++ QRVFLRGK VTV+EG VLV
Sbjct: 241 AHCGLAPYWSEKLGKCDLKAYMASTRGGALNIHVDKQKQRVFLRGKGVTVIEGYVLV 297


>Medtr4g107220.1 | phenazine biosynthesis PhzC/PhzF family protein |
           HC | chr4:44288037-44292471 | 20130731
          Length = 298

 Score =  411 bits (1056), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/298 (67%), Positives = 237/298 (79%), Gaps = 3/298 (1%)

Query: 1   MASKPVKYYVVDAFTESAFKGNPAAVCLLEEDKDDDWLQAVAAEFNISETCFLTRIDG-T 59
           M+ KP+KYYVVDAFTESAFKGNPAAVCLLEE++DD+WLQA+AAEFNIS T +L  I   T
Sbjct: 1   MSKKPMKYYVVDAFTESAFKGNPAAVCLLEEERDDEWLQALAAEFNISMTSYLIPIQQET 60

Query: 60  SNPRFGLRWFTPVVEVNLCGHATLAAAHILFSSGLVKTNVIEFVTLSGILTVKKIPAVN- 118
             PRF LRWF+P+VE NLCGHATLAAAH+ FSSGLV  +VIEF+T SG+LT KKI ++N 
Sbjct: 61  KIPRFHLRWFSPIVEDNLCGHATLAAAHVAFSSGLVDRDVIEFMTQSGMLTAKKISSING 120

Query: 119 ATNGT-NLQKSEAKDGFYIELDFPADHIIESNFDGTARISGALNGAPIIDIKSTQNSEDF 177
           +T+G  N Q  EAKD FY+ELDFPAD I E  FD  + ISG L+ A I+D+K T+  +D 
Sbjct: 121 STSGMKNFQNHEAKDVFYVELDFPADPISELKFDDISLISGVLSEASIVDVKRTEIQDDL 180

Query: 178 LVELASREDVIAVQPQLDAMVKFPGRGVIVSAIAPPESGFDFYSRFFCPKFGVDEDPVCG 237
           +V +AS ++V  VQP  DA+ K P RGV VS +APPESGFDFYSRFFCPK G++EDPVCG
Sbjct: 181 IVVVASAKNVTEVQPHFDAIYKLPVRGVSVSGVAPPESGFDFYSRFFCPKIGINEDPVCG 240

Query: 238 TAHCALASYWSKKLGKCDFIANQASPRGGILHIHLDEENQRVFLRGKAVTVMEGCVLV 295
           TAH  +ASYWSKKLGKCD  A Q S RGG+L+IH+DE  QRVFLRGKA+TVMEG VLV
Sbjct: 241 TAHLGMASYWSKKLGKCDLKAYQTSTRGGVLNIHIDERKQRVFLRGKAITVMEGFVLV 298


>Medtr1g062540.1 | phenazine biosynthesis PhzC/PhzF family protein |
           LC | chr1:27358017-27362934 | 20130731
          Length = 301

 Score =  402 bits (1032), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/301 (67%), Positives = 230/301 (76%), Gaps = 6/301 (1%)

Query: 1   MASKPVKYYVVDAFTESAFKGNPAAVCLLEEDKDDDWLQAVAAEFNISETCFLTRIDGTS 60
           M+ KP KYYVVDAFTE+AFKGNPAAVCLLEEDKDD+WLQA+A+EFN+  TC+L  I GTS
Sbjct: 1   MSKKPTKYYVVDAFTETAFKGNPAAVCLLEEDKDDEWLQALASEFNMPMTCYLIPIHGTS 60

Query: 61  --NPRFGLRWFTPVVEVNLCGHATLAAAHILFSSGLVKTN-VIEFVT-LSGILTVKKIPA 116
             N RFG+RWFT  VEV+LCGHAT+AA+H LFSSGLV  N  IEFVT  SG LT KKI  
Sbjct: 61  KSNSRFGIRWFTSNVEVDLCGHATIAASHALFSSGLVDKNATIEFVTQYSGSLTAKKISV 120

Query: 117 VNAT--NGTNLQKSEAKDGFYIELDFPADHIIESNFDGTARISGALNGAPIIDIKSTQNS 174
            N T  N T+LQ  EAKD FYIELDFP D I E NFD T+ IS AL GA IIDIK T   
Sbjct: 121 TNGTLTNLTSLQNDEAKDTFYIELDFPVDPITELNFDDTSLISEALGGASIIDIKRTLIQ 180

Query: 175 EDFLVELASREDVIAVQPQLDAMVKFPGRGVIVSAIAPPESGFDFYSRFFCPKFGVDEDP 234
           ++ LV + S ++V A+ PQ DA+ + P RGV VS IAP ESGFDFYSRFF PK GV+ED 
Sbjct: 181 DNILVVVTSGKNVKAIHPQFDAICRIPRRGVSVSGIAPSESGFDFYSRFFAPKIGVNEDL 240

Query: 235 VCGTAHCALASYWSKKLGKCDFIANQASPRGGILHIHLDEENQRVFLRGKAVTVMEGCVL 294
           VCG+ HC LASYWSKKLGKCD  A Q S RGG + IHLDE+ QRVFLRGKA+ VMEGCVL
Sbjct: 241 VCGSVHCGLASYWSKKLGKCDLKAYQTSTRGGAIDIHLDEQKQRVFLRGKAIIVMEGCVL 300

Query: 295 V 295
           V
Sbjct: 301 V 301


>Medtr1g072490.2 | phenazine biosynthesis PhzC/PhzF family protein |
           HC | chr1:32165521-32163464 | 20130731
          Length = 233

 Score =  347 bits (890), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 172/232 (74%), Positives = 193/232 (83%), Gaps = 2/232 (0%)

Query: 1   MASKPVKYYVVDAFTESAFKGNPAAVCLLEEDKDDDWLQAVAAEFNISETCFLTRIDGTS 60
           MA K VKYYVVDAFT+SAFKGNPAAVCLLEEDKDD+WLQ+VAAEFNISETC+LT I GTS
Sbjct: 1   MAKKHVKYYVVDAFTDSAFKGNPAAVCLLEEDKDDEWLQSVAAEFNISETCYLTSIHGTS 60

Query: 61  NPRFGLRWFTPVVEVNLCGHATLAAAHILFSSGLVKTNVIEFVTLSGILTVKKIPAVNAT 120
            PRFGLRWFTPVVEVNLCGHATLAAAH LFSSGLV  NVIEFVTLSG+LTV+KIP+++ T
Sbjct: 61  IPRFGLRWFTPVVEVNLCGHATLAAAHTLFSSGLVDKNVIEFVTLSGVLTVRKIPSMDVT 120

Query: 121 NGTNLQKSEAKDGFYIELDFPADHIIESNFDGTARISGALNGAPIIDIKSTQNSEDFLVE 180
              NL  SEA  GFYIE+DFPA  + E N D T+ IS A NGA IIDIK T   ED LV 
Sbjct: 121 GVPNLLNSEAAAGFYIEMDFPAYPVAEFNSDDTSLISEATNGASIIDIKKT--GEDLLVV 178

Query: 181 LASREDVIAVQPQLDAMVKFPGRGVIVSAIAPPESGFDFYSRFFCPKFGVDE 232
           +AS ++V  +QPQLDA+ K PGRG+IV+ IAPPESGFDFYSRFF PKFG++E
Sbjct: 179 VASGKNVTEIQPQLDAIAKLPGRGLIVTGIAPPESGFDFYSRFFAPKFGINE 230


>Medtr1g062530.1 | phenazine biosynthesis PhzC/PhzF family protein |
           LC | chr1:27350463-27347414 | 20130731
          Length = 237

 Score =  311 bits (797), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 156/234 (66%), Positives = 185/234 (79%), Gaps = 2/234 (0%)

Query: 1   MASKPVKYYVVDAFTESAFKGNPAAVCLLEEDKDDDWLQAVAAEFNISETCFLTRIDGTS 60
           MA K VKYY VDAFTE+AFKGNPAAVC LEEDKDD+WLQ++AAEFN+S+TC+LT I GTS
Sbjct: 1   MAKKHVKYYGVDAFTETAFKGNPAAVCFLEEDKDDEWLQSLAAEFNVSQTCYLTPIHGTS 60

Query: 61  NPRFGLRWFTPVVEVNLCGHATLAAAHILFSSGLVKTNVIEFVTLSGILTVKKIPAVNAT 120
            PRFGL+WFTP+VEVNLCGHATLAA+HILFSS LV  +VIEFVTLSG+LTVKKIP+++  
Sbjct: 61  IPRFGLKWFTPIVEVNLCGHATLAASHILFSSDLVNNSVIEFVTLSGVLTVKKIPSIDVV 120

Query: 121 NGTNLQKSEAKD-GFYIELDFPADHIIESNF-DGTARISGALNGAPIIDIKSTQNSEDFL 178
              NL   +A   GFYIELDFPA + I   + D  + I  ALNGA IID+K T+ ++D L
Sbjct: 121 GVPNLLNGKAPPVGFYIELDFPAYYPITKLYHDDISIIDEALNGASIIDMKRTEFADDLL 180

Query: 179 VELASREDVIAVQPQLDAMVKFPGRGVIVSAIAPPESGFDFYSRFFCPKFGVDE 232
           V L S + V+ VQ Q DA+ K  GRGV V+ IAPPESGFDFYSRFF PKFG++E
Sbjct: 181 VVLTSGKIVLEVQAQFDALAKLSGRGVSVTGIAPPESGFDFYSRFFSPKFGINE 234


>Medtr1g062440.1 | phenazine biosynthesis protein | LC |
           chr1:27263641-27261430 | 20130731
          Length = 183

 Score =  174 bits (442), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 81/121 (66%), Positives = 96/121 (79%)

Query: 175 EDFLVELASREDVIAVQPQLDAMVKFPGRGVIVSAIAPPESGFDFYSRFFCPKFGVDEDP 234
           EDF V L S  +V+ VQP  DA+ K  GRGV V+ I PP+SGFDFYSRFF PKFG++EDP
Sbjct: 63  EDFEVVLTSGTNVLEVQPHFDALAKLSGRGVSVTGIVPPDSGFDFYSRFFSPKFGINEDP 122

Query: 235 VCGTAHCALASYWSKKLGKCDFIANQASPRGGILHIHLDEENQRVFLRGKAVTVMEGCVL 294
           VCG+AHC LA YWS+KLGKCD  A  AS RGG L+IH+D++ QRVFLRGKAVTV++G VL
Sbjct: 123 VCGSAHCGLAPYWSEKLGKCDLKAYMASTRGGALNIHVDKQKQRVFLRGKAVTVIKGYVL 182

Query: 295 V 295
           V
Sbjct: 183 V 183


>Medtr1g062510.1 | phenazine biosynthesis PhzC/PhzF family protein |
           HC | chr1:27333566-27334039 | 20130731
          Length = 66

 Score = 95.1 bits (235), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 41/53 (77%), Positives = 48/53 (90%)

Query: 243 LASYWSKKLGKCDFIANQASPRGGILHIHLDEENQRVFLRGKAVTVMEGCVLV 295
           LASYWSKKLGKCD  A +AS RGG ++IH+DE+NQRVF+RGKA+TVMEGCVLV
Sbjct: 14  LASYWSKKLGKCDLKAYEASTRGGAINIHIDEQNQRVFIRGKAITVMEGCVLV 66