Miyakogusa Predicted Gene

Lj5g3v0962840.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0962840.1 tr|A8HMH0|A8HMH0_CHLRE Predicted protein
(Fragment) OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_14670,33.93,4e-18,R3H domain,NULL;
R3H-assoc,R3H-associated N-terminal domain; seg,NULL,CUFF.54379.1
         (246 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g072510.1 | R3H-associated amine-terminal domain protein |...   381   e-106
Medtr1g072510.2 | R3H-associated amine-terminal domain protein |...   369   e-102
Medtr1g072510.3 | R3H-associated amine-terminal domain protein |...   261   6e-70

>Medtr1g072510.1 | R3H-associated amine-terminal domain protein | HC
           | chr1:32173770-32170370 | 20130731
          Length = 246

 Score =  381 bits (978), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/246 (79%), Positives = 216/246 (87%)

Query: 1   MVLLHRELDLLLSTHLADPLKGDGAKSKGMSIEKKIEFLESFTGKVTNRRSRRWLNDRLL 60
           MVL HR+LDLLLS+HL +  +GDGAKS  MSIEKKIEFLESFTGKVTNRRSRRWLNDRLL
Sbjct: 1   MVLQHRDLDLLLSSHLINHPRGDGAKSNSMSIEKKIEFLESFTGKVTNRRSRRWLNDRLL 60

Query: 61  MELVPRLNAEEIRGLFAPPPWGDEVPPSTFSMTNVEEWDRFRNIDMDKEVNIIHALENTL 120
           MELVPRLNAEEIRGLFAPPP+GDEVPPSTFS+TNVEEWDRFRNIDMDKEVNIIHA EN+L
Sbjct: 61  MELVPRLNAEEIRGLFAPPPFGDEVPPSTFSLTNVEEWDRFRNIDMDKEVNIIHAFENSL 120

Query: 121 DKKKGHVDADKLAVLNAWHRVDCKTRDALRRSSLSELIEGYEECVRTFITEKTDGDVLEL 180
           +KK+G +DADK+AVLN W RV   TR+ALRRSSL ELIEGYEEC+R FITE TDGD+LEL
Sbjct: 121 EKKEGRIDADKMAVLNGWRRVGSNTREALRRSSLFELIEGYEECLRAFITESTDGDLLEL 180

Query: 181 QIQDPFHRLLLHGVCEFYNLASDTVTDFNGGESSXXXXXXXXXRGSPEILKITLSHFLKM 240
            I+DPFHRLLLHGVCEFYNLASDTV+D NG E+S         R SPE+ KITLSHFL+M
Sbjct: 181 SIKDPFHRLLLHGVCEFYNLASDTVSDLNGTETSKTTKIKKKKRASPELPKITLSHFLRM 240

Query: 241 TKEGSW 246
           +KEGSW
Sbjct: 241 SKEGSW 246


>Medtr1g072510.2 | R3H-associated amine-terminal domain protein | HC
           | chr1:32173770-32170370 | 20130731
          Length = 273

 Score =  369 bits (947), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 191/273 (69%), Positives = 212/273 (77%), Gaps = 27/273 (9%)

Query: 1   MVLLHRELDL---------------------------LLSTHLADPLKGDGAKSKGMSIE 33
           MVL HR+LDL                           + ++     + GDGAKS  MSIE
Sbjct: 1   MVLQHRDLDLLLSSHLINHPRGSFSNYSFASAGSCFEIKNSFFFFFVAGDGAKSNSMSIE 60

Query: 34  KKIEFLESFTGKVTNRRSRRWLNDRLLMELVPRLNAEEIRGLFAPPPWGDEVPPSTFSMT 93
           KKIEFLESFTGKVTNRRSRRWLNDRLLMELVPRLNAEEIRGLFAPPP+GDEVPPSTFS+T
Sbjct: 61  KKIEFLESFTGKVTNRRSRRWLNDRLLMELVPRLNAEEIRGLFAPPPFGDEVPPSTFSLT 120

Query: 94  NVEEWDRFRNIDMDKEVNIIHALENTLDKKKGHVDADKLAVLNAWHRVDCKTRDALRRSS 153
           NVEEWDRFRNIDMDKEVNIIHA EN+L+KK+G +DADK+AVLN W RV   TR+ALRRSS
Sbjct: 121 NVEEWDRFRNIDMDKEVNIIHAFENSLEKKEGRIDADKMAVLNGWRRVGSNTREALRRSS 180

Query: 154 LSELIEGYEECVRTFITEKTDGDVLELQIQDPFHRLLLHGVCEFYNLASDTVTDFNGGES 213
           L ELIEGYEEC+R FITE TDGD+LEL I+DPFHRLLLHGVCEFYNLASDTV+D NG E+
Sbjct: 181 LFELIEGYEECLRAFITESTDGDLLELSIKDPFHRLLLHGVCEFYNLASDTVSDLNGTET 240

Query: 214 SXXXXXXXXXRGSPEILKITLSHFLKMTKEGSW 246
           S         R SPE+ KITLSHFL+M+KEGSW
Sbjct: 241 SKTTKIKKKKRASPELPKITLSHFLRMSKEGSW 273


>Medtr1g072510.3 | R3H-associated amine-terminal domain protein | HC
           | chr1:32173770-32170370 | 20130731
          Length = 182

 Score =  261 bits (666), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 126/165 (76%), Positives = 141/165 (85%)

Query: 82  GDEVPPSTFSMTNVEEWDRFRNIDMDKEVNIIHALENTLDKKKGHVDADKLAVLNAWHRV 141
           GDEVPPSTFS+TNVEEWDRFRNIDMDKEVNIIHA EN+L+KK+G +DADK+AVLN W RV
Sbjct: 18  GDEVPPSTFSLTNVEEWDRFRNIDMDKEVNIIHAFENSLEKKEGRIDADKMAVLNGWRRV 77

Query: 142 DCKTRDALRRSSLSELIEGYEECVRTFITEKTDGDVLELQIQDPFHRLLLHGVCEFYNLA 201
              TR+ALRRSSL ELIEGYEEC+R FITE TDGD+LEL I+DPFHRLLLHGVCEFYNLA
Sbjct: 78  GSNTREALRRSSLFELIEGYEECLRAFITESTDGDLLELSIKDPFHRLLLHGVCEFYNLA 137

Query: 202 SDTVTDFNGGESSXXXXXXXXXRGSPEILKITLSHFLKMTKEGSW 246
           SDTV+D NG E+S         R SPE+ KITLSHFL+M+KEGSW
Sbjct: 138 SDTVSDLNGTETSKTTKIKKKKRASPELPKITLSHFLRMSKEGSW 182