Miyakogusa Predicted Gene

Lj5g3v0962420.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0962420.2 Non Characterized Hit- tr|I1JEQ7|I1JEQ7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,43.18,0.000000000004,
,CUFF.54344.2
         (92 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g036040.1 | hypothetical protein | HC | chr4:12860079-1286...    52   1e-07

>Medtr4g036040.1 | hypothetical protein | HC |
          chr4:12860079-12862402 | 20130731
          Length = 359

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 12/88 (13%)

Query: 1  MKKGKSQTVESSQVRQEVLRGTNDMDQMLLNAFSEESAKGHRYGGSWTIVAYANVLDALW 60
          M KGK    +S    +++L+  +DMDQ LLNA  EE+ KG+R  G             L 
Sbjct: 1  MSKGKGAASQSDNPGRDILQWNDDMDQALLNALREENHKGNRLDG------------VLR 48

Query: 61 IAISPTIRKQHIIARMRALRVRSARMSD 88
            I PTI K HI  R++ L+       D
Sbjct: 49 SVIDPTITKNHIKNRLKTLKAHFGEAHD 76