Miyakogusa Predicted Gene

Lj5g3v0962410.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0962410.2 Non Characterized Hit- tr|D8T3E5|D8T3E5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,52.58,0.0000000000001,seg,NULL; coiled-coil,NULL,CUFF.54353.2
         (168 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g072640.1 | PALE CRESS protein (PAC) | HC | chr1:32260270-...   121   4e-28
Medtr1g072640.2 | PALE CRESS protein (PAC) | HC | chr1:32260225-...   120   5e-28

>Medtr1g072640.1 | PALE CRESS protein (PAC) | HC |
           chr1:32260270-32255395 | 20130731
          Length = 320

 Score =  121 bits (303), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 68/121 (56%), Positives = 72/121 (59%), Gaps = 1/121 (0%)

Query: 48  LRRCVSKEKEEDVLLEGMPDHYYDDEWQAKQXXXXXXXXXXXXXXXXXXXXXXXXXXXIG 107
           LR CV+KEKEE VLLEGMP HYYDDEWQA+Q                           +G
Sbjct: 45  LRTCVNKEKEE-VLLEGMPSHYYDDEWQARQREKTKELHRRRREEEEEEERKIEEYREVG 103

Query: 108 MRLKGYPEEDVRKARKLVSSFIRXXXXXXXXXXXXXXXXXLDELVLMVIWNRLDLARRDD 167
           MRLK YPEEDVRKARKL+SSFIR                 L ELVLMVIWNRLDLARRDD
Sbjct: 104 MRLKEYPEEDVRKARKLISSFIRAAEEVEEKIEEAAERGELTELVLMVIWNRLDLARRDD 163

Query: 168 E 168
           E
Sbjct: 164 E 164


>Medtr1g072640.2 | PALE CRESS protein (PAC) | HC |
           chr1:32260225-32255592 | 20130731
          Length = 244

 Score =  120 bits (302), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 68/121 (56%), Positives = 72/121 (59%), Gaps = 1/121 (0%)

Query: 48  LRRCVSKEKEEDVLLEGMPDHYYDDEWQAKQXXXXXXXXXXXXXXXXXXXXXXXXXXXIG 107
           LR CV+KEKEE VLLEGMP HYYDDEWQA+Q                           +G
Sbjct: 45  LRTCVNKEKEE-VLLEGMPSHYYDDEWQARQREKTKELHRRRREEEEEEERKIEEYREVG 103

Query: 108 MRLKGYPEEDVRKARKLVSSFIRXXXXXXXXXXXXXXXXXLDELVLMVIWNRLDLARRDD 167
           MRLK YPEEDVRKARKL+SSFIR                 L ELVLMVIWNRLDLARRDD
Sbjct: 104 MRLKEYPEEDVRKARKLISSFIRAAEEVEEKIEEAAERGELTELVLMVIWNRLDLARRDD 163

Query: 168 E 168
           E
Sbjct: 164 E 164