Miyakogusa Predicted Gene
- Lj5g3v0962410.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0962410.1 tr|G7IEG8|G7IEG8_MEDTR PAC OS=Medicago truncatula
GN=MTR_1g072620 PE=4 SV=1,77.55,0.0000005,seg,NULL;
coiled-coil,NULL,CUFF.54353.1
(307 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g072640.1 | PALE CRESS protein (PAC) | HC | chr1:32260270-... 353 8e-98
Medtr1g072640.2 | PALE CRESS protein (PAC) | HC | chr1:32260225-... 270 1e-72
Medtr1g072620.1 | hypothetical protein | HC | chr1:32245641-3224... 55 6e-08
>Medtr1g072640.1 | PALE CRESS protein (PAC) | HC |
chr1:32260270-32255395 | 20130731
Length = 320
Score = 353 bits (907), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 189/277 (68%), Positives = 204/277 (73%), Gaps = 2/277 (0%)
Query: 32 LRRCVSKEKEEDVLLEGMPDHYYDDEWQAKQXXXXXXXXXXXXXXXXXXXXXXXXXXXIG 91
LR CV+KEKEE VLLEGMP HYYDDEWQA+Q +G
Sbjct: 45 LRTCVNKEKEE-VLLEGMPSHYYDDEWQARQREKTKELHRRRREEEEEEERKIEEYREVG 103
Query: 92 MRLKGYPEEDVRKARKLVSSFIRXXXXXXXXXXXXXXXXXLDELVLMVIWNRLDLARRDD 151
MRLK YPEEDVRKARKL+SSFIR L ELVLMVIWNRLDLARRDD
Sbjct: 104 MRLKEYPEEDVRKARKLISSFIRAAEEVEEKIEEAAERGELTELVLMVIWNRLDLARRDD 163
Query: 152 EKDAIRSLDLLYRRVETEILKQEATPAMRLLNDLLVMYDGFNLEEWLRKCKKIMIDTFPR 211
EKDAIRSLDLLYRRVETEILK+EATPAMRLLNDLL+MYDGFN +EWL+KCKKIMIDTFPR
Sbjct: 164 EKDAIRSLDLLYRRVETEILKREATPAMRLLNDLLIMYDGFNFDEWLKKCKKIMIDTFPR 223
Query: 212 EDPFSILVPPGFESFDLDKHQGPLRLPLEADD-TLLRVDFVREVDELLQXXXXXXXXXXX 270
EDP+SILVPPGFESFD+D+H GPLR LE DD TLLR+DFVREVDELLQ
Sbjct: 224 EDPYSILVPPGFESFDIDQHHGPLRPSLEVDDNTLLRIDFVREVDELLQDVRSEQDEEEN 283
Query: 271 XPGFDPQSVASRLKQQEKQQTIRQVEALLDLAISLKW 307
+ +SVA+ LKQQEKQQTIRQVEALLDLAISL W
Sbjct: 284 EQELNAESVANILKQQEKQQTIRQVEALLDLAISLNW 320
>Medtr1g072640.2 | PALE CRESS protein (PAC) | HC |
chr1:32260225-32255592 | 20130731
Length = 244
Score = 270 bits (690), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/199 (69%), Positives = 149/199 (74%), Gaps = 1/199 (0%)
Query: 32 LRRCVSKEKEEDVLLEGMPDHYYDDEWQAKQXXXXXXXXXXXXXXXXXXXXXXXXXXXIG 91
LR CV+KEKEE VLLEGMP HYYDDEWQA+Q +G
Sbjct: 45 LRTCVNKEKEE-VLLEGMPSHYYDDEWQARQREKTKELHRRRREEEEEEERKIEEYREVG 103
Query: 92 MRLKGYPEEDVRKARKLVSSFIRXXXXXXXXXXXXXXXXXLDELVLMVIWNRLDLARRDD 151
MRLK YPEEDVRKARKL+SSFIR L ELVLMVIWNRLDLARRDD
Sbjct: 104 MRLKEYPEEDVRKARKLISSFIRAAEEVEEKIEEAAERGELTELVLMVIWNRLDLARRDD 163
Query: 152 EKDAIRSLDLLYRRVETEILKQEATPAMRLLNDLLVMYDGFNLEEWLRKCKKIMIDTFPR 211
EKDAIRSLDLLYRRVETEILK+EATPAMRLLNDLL+MYDGFN +EWL+KCKKIMIDTFPR
Sbjct: 164 EKDAIRSLDLLYRRVETEILKREATPAMRLLNDLLIMYDGFNFDEWLKKCKKIMIDTFPR 223
Query: 212 EDPFSILVPPGFESFDLDK 230
EDP+SILVPPGFESFD+D+
Sbjct: 224 EDPYSILVPPGFESFDIDQ 242
>Medtr1g072620.1 | hypothetical protein | HC |
chr1:32245641-32245429 | 20130731
Length = 70
Score = 55.5 bits (132), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 33/49 (67%)
Query: 242 DDTLLRVDFVREVDELLQXXXXXXXXXXXXPGFDPQSVASRLKQQEKQQ 290
D+TLLRV+FVREVDELLQ F P +VA+RLKQQEKQQ
Sbjct: 19 DNTLLRVNFVREVDELLQEVCSEHDEEENEHEFSPDTVANRLKQQEKQQ 67