Miyakogusa Predicted Gene

Lj5g3v0942170.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0942170.1 Non Characterized Hit- tr|B9SQT4|B9SQT4_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,43.55,1e-17,seg,NULL,CUFF.54333.1
         (152 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g073260.1 | hypothetical protein | HC | chr1:32516137-3251...   159   9e-40
Medtr1g073260.2 | hypothetical protein | HC | chr1:32516184-3251...   159   1e-39
Medtr1g073260.4 | hypothetical protein | HC | chr1:32516651-3251...   159   1e-39
Medtr1g073260.5 | hypothetical protein | HC | chr1:32516184-3251...   136   6e-33
Medtr1g073260.3 | hypothetical protein | HC | chr1:32516186-3251...    62   1e-10

>Medtr1g073260.1 | hypothetical protein | HC |
           chr1:32516137-32512964 | 20130731
          Length = 309

 Score =  159 bits (402), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 89/153 (58%), Positives = 105/153 (68%), Gaps = 9/153 (5%)

Query: 9   KCYVPNVPIPRAPVTENFXXXXXXXXXXXXA------GPEKDGSTD-EDKANIRASSIPR 61
           K Y+    IPR PVTE+F                   GPEKDG+ D E+K NIRAS IPR
Sbjct: 157 KVYIRVDLIPRVPVTEDFGDGDLASDLSGPGRLEKDHGPEKDGNIDDENKVNIRASPIPR 216

Query: 62  PRAVISSPDNDTLIGNRNRIRDGRFSASKNGTVLQNRHA--HCKVKSHDVAEVPPDTRKS 119
           PRAVISSP+ND +IG+RN+I +GR   SKN TVL NRHA   CKVKSHD  ++PPDTRKS
Sbjct: 217 PRAVISSPENDLMIGSRNKIGNGRVYVSKNSTVLPNRHALAQCKVKSHDTTDIPPDTRKS 276

Query: 120 KEPGSKEKTDPVEKKRVHKGSVKSENVPRNWKF 152
            E  SK+K D V KK+VHKGSVKS+N+ R+WKF
Sbjct: 277 TETKSKDKVDHVGKKKVHKGSVKSDNLHRHWKF 309



 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 33/61 (54%), Positives = 36/61 (59%)

Query: 1   MPSIVKVPKCYVPNVPIPRAPVTENFXXXXXXXXXXXXAGPEKDGSTDEDKANIRASSIP 60
           +PSIVKVPK Y+P V IPR  VTE+F            A P KDG TDE K  IRA  IP
Sbjct: 65  VPSIVKVPKFYLPQVSIPRVSVTEDFVDCSLTSDSSGSAEPGKDGDTDESKVYIRADLIP 124

Query: 61  R 61
           R
Sbjct: 125 R 125


>Medtr1g073260.2 | hypothetical protein | HC |
           chr1:32516184-32512964 | 20130731
          Length = 293

 Score =  159 bits (402), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 89/153 (58%), Positives = 105/153 (68%), Gaps = 9/153 (5%)

Query: 9   KCYVPNVPIPRAPVTENFXXXXXXXXXXXXA------GPEKDGSTD-EDKANIRASSIPR 61
           K Y+    IPR PVTE+F                   GPEKDG+ D E+K NIRAS IPR
Sbjct: 141 KVYIRVDLIPRVPVTEDFGDGDLASDLSGPGRLEKDHGPEKDGNIDDENKVNIRASPIPR 200

Query: 62  PRAVISSPDNDTLIGNRNRIRDGRFSASKNGTVLQNRHA--HCKVKSHDVAEVPPDTRKS 119
           PRAVISSP+ND +IG+RN+I +GR   SKN TVL NRHA   CKVKSHD  ++PPDTRKS
Sbjct: 201 PRAVISSPENDLMIGSRNKIGNGRVYVSKNSTVLPNRHALAQCKVKSHDTTDIPPDTRKS 260

Query: 120 KEPGSKEKTDPVEKKRVHKGSVKSENVPRNWKF 152
            E  SK+K D V KK+VHKGSVKS+N+ R+WKF
Sbjct: 261 TETKSKDKVDHVGKKKVHKGSVKSDNLHRHWKF 293



 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 33/61 (54%), Positives = 36/61 (59%)

Query: 1   MPSIVKVPKCYVPNVPIPRAPVTENFXXXXXXXXXXXXAGPEKDGSTDEDKANIRASSIP 60
           +PSIVKVPK Y+P V IPR  VTE+F            A P KDG TDE K  IRA  IP
Sbjct: 49  VPSIVKVPKFYLPQVSIPRVSVTEDFVDCSLTSDSSGSAEPGKDGDTDESKVYIRADLIP 108

Query: 61  R 61
           R
Sbjct: 109 R 109


>Medtr1g073260.4 | hypothetical protein | HC |
           chr1:32516651-32512964 | 20130731
          Length = 293

 Score =  159 bits (402), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 89/153 (58%), Positives = 105/153 (68%), Gaps = 9/153 (5%)

Query: 9   KCYVPNVPIPRAPVTENFXXXXXXXXXXXXA------GPEKDGSTD-EDKANIRASSIPR 61
           K Y+    IPR PVTE+F                   GPEKDG+ D E+K NIRAS IPR
Sbjct: 141 KVYIRVDLIPRVPVTEDFGDGDLASDLSGPGRLEKDHGPEKDGNIDDENKVNIRASPIPR 200

Query: 62  PRAVISSPDNDTLIGNRNRIRDGRFSASKNGTVLQNRHA--HCKVKSHDVAEVPPDTRKS 119
           PRAVISSP+ND +IG+RN+I +GR   SKN TVL NRHA   CKVKSHD  ++PPDTRKS
Sbjct: 201 PRAVISSPENDLMIGSRNKIGNGRVYVSKNSTVLPNRHALAQCKVKSHDTTDIPPDTRKS 260

Query: 120 KEPGSKEKTDPVEKKRVHKGSVKSENVPRNWKF 152
            E  SK+K D V KK+VHKGSVKS+N+ R+WKF
Sbjct: 261 TETKSKDKVDHVGKKKVHKGSVKSDNLHRHWKF 293



 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 33/61 (54%), Positives = 36/61 (59%)

Query: 1   MPSIVKVPKCYVPNVPIPRAPVTENFXXXXXXXXXXXXAGPEKDGSTDEDKANIRASSIP 60
           +PSIVKVPK Y+P V IPR  VTE+F            A P KDG TDE K  IRA  IP
Sbjct: 49  VPSIVKVPKFYLPQVSIPRVSVTEDFVDCSLTSDSSGSAEPGKDGDTDESKVYIRADLIP 108

Query: 61  R 61
           R
Sbjct: 109 R 109


>Medtr1g073260.5 | hypothetical protein | HC |
           chr1:32516184-32512531 | 20130731
          Length = 281

 Score =  136 bits (343), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/139 (56%), Positives = 92/139 (66%), Gaps = 9/139 (6%)

Query: 9   KCYVPNVPIPRAPVTENFXXXXXXXXXXXXA------GPEKDGSTD-EDKANIRASSIPR 61
           K Y+    IPR PVTE+F                   GPEKDG+ D E+K NIRAS IPR
Sbjct: 141 KVYIRVDLIPRVPVTEDFGDGDLASDLSGPGRLEKDHGPEKDGNIDDENKVNIRASPIPR 200

Query: 62  PRAVISSPDNDTLIGNRNRIRDGRFSASKNGTVLQNRH--AHCKVKSHDVAEVPPDTRKS 119
           PRAVISSP+ND +IG+RN+I +GR   SKN TVL NRH  A CKVKSHD  ++PPDTRKS
Sbjct: 201 PRAVISSPENDLMIGSRNKIGNGRVYVSKNSTVLPNRHALAQCKVKSHDTTDIPPDTRKS 260

Query: 120 KEPGSKEKTDPVEKKRVHK 138
            E  SK+K D V KK+VHK
Sbjct: 261 TETKSKDKVDHVGKKKVHK 279



 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/61 (54%), Positives = 36/61 (59%)

Query: 1   MPSIVKVPKCYVPNVPIPRAPVTENFXXXXXXXXXXXXAGPEKDGSTDEDKANIRASSIP 60
           +PSIVKVPK Y+P V IPR  VTE+F            A P KDG TDE K  IRA  IP
Sbjct: 49  VPSIVKVPKFYLPQVSIPRVSVTEDFVDCSLTSDSSGSAEPGKDGDTDESKVYIRADLIP 108

Query: 61  R 61
           R
Sbjct: 109 R 109


>Medtr1g073260.3 | hypothetical protein | HC |
           chr1:32516186-32512964 | 20130731
          Length = 236

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/61 (54%), Positives = 36/61 (59%)

Query: 1   MPSIVKVPKCYVPNVPIPRAPVTENFXXXXXXXXXXXXAGPEKDGSTDEDKANIRASSIP 60
           +PSIVKVPK Y+P V IPR  VTE+F            A P KDG TDE K  IRA  IP
Sbjct: 49  VPSIVKVPKFYLPQVSIPRVSVTEDFVDCSLTSDSSGSAEPGKDGDTDESKVYIRADLIP 108

Query: 61  R 61
           R
Sbjct: 109 R 109



 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 39/68 (57%), Gaps = 7/68 (10%)

Query: 9   KCYVPNVPIPRAPVTENFXXXXXXXXXXXXA------GPEKDGSTD-EDKANIRASSIPR 61
           K Y+    IPR PVTE+F                   GPEKDG+ D E+K NIRAS IPR
Sbjct: 141 KVYIRVDLIPRVPVTEDFGDGDLASDLSGPGRLEKDHGPEKDGNIDDENKVNIRASPIPR 200

Query: 62  PRAVISSP 69
           PRAVISSP
Sbjct: 201 PRAVISSP 208