Miyakogusa Predicted Gene

Lj5g3v0931370.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0931370.1 Non Characterized Hit- tr|I3S7F6|I3S7F6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.05,0,CYTC,Cytochrome c domain; Cytochrom_C1,Cytochrome c1;
CYTOCHROME C1, HEME PROTEIN, MITOCHONDRIAL,NUL,CUFF.54345.1
         (307 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g023290.1 | cytochrome c1, heme protein | HC | chr6:810997...   513   e-146
Medtr6g023230.1 | cytochrome c1, heme protein | HC | chr6:808037...   506   e-143
Medtr6g023280.1 | cytochrome c1, heme protein | HC | chr6:809993...    99   4e-21
Medtr6g023270.1 | cytochrome c1 family protein | LC | chr6:80972...    83   4e-16

>Medtr6g023290.1 | cytochrome c1, heme protein | HC |
           chr6:8109977-8104364 | 20130731
          Length = 307

 Score =  513 bits (1321), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 250/307 (81%), Positives = 258/307 (84%)

Query: 1   MAGSVIXXXXXXXXXXXXXXXXXXXXIVTKNNDAGSTGSSSIRALALIGAGVSGFLGFAT 60
           MAG V                     I+TK + AGST + S RALALIGAGVSG LGFAT
Sbjct: 1   MAGGVFQQLLRRKLKSHSPNPSSMSSIITKIDGAGSTSNRSFRALALIGAGVSGLLGFAT 60

Query: 61  TASADEAEHGLSCPSYPWPHEGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGV 120
           TASADEAEHGL+ PSYPWPHEGILSSYDHASIRRGHQVY QVCASCHSMSLISYRDLVGV
Sbjct: 61  TASADEAEHGLAAPSYPWPHEGILSSYDHASIRRGHQVYTQVCASCHSMSLISYRDLVGV 120

Query: 121 AYTEEEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRLPQPYANEAAARFANGGAYPPDLS 180
           AYTE EVKAMA EIEVVDGPNDEGEMFTRPGKLSDR PQPY+NE+AARFANGGAYPPDLS
Sbjct: 121 AYTEAEVKAMATEIEVVDGPNDEGEMFTRPGKLSDRFPQPYSNESAARFANGGAYPPDLS 180

Query: 181 LITKARHNGQNYVFALLTGYRDPPSGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDG 240
           LITKARHNGQNYVFALLTGYRDPP+GV IREGLHYNPYFPGGAIAMPKMLNDGAVEYEDG
Sbjct: 181 LITKARHNGQNYVFALLTGYRDPPAGVVIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDG 240

Query: 241 TPATESQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVXXXXXXXXXXXXXXXWSVLKSRK 300
           TPATE+QMGKDVVSFLSWAAEPEMEERKLMGFKWIFV               WSVLKSRK
Sbjct: 241 TPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRK 300

Query: 301 LVLDVVN 307
           LVLDVVN
Sbjct: 301 LVLDVVN 307


>Medtr6g023230.1 | cytochrome c1, heme protein | HC |
           chr6:8080377-8075843 | 20130731
          Length = 306

 Score =  506 bits (1302), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 250/281 (88%), Positives = 258/281 (91%)

Query: 27  IVTKNNDAGSTGSSSIRALALIGAGVSGFLGFATTASADEAEHGLSCPSYPWPHEGILSS 86
           IV+K + +GSTGSSS+RALALIGAGVSG LGFATTASADEAEHGL+ P YPWPHEGILSS
Sbjct: 26  IVSKKDGSGSTGSSSLRALALIGAGVSGLLGFATTASADEAEHGLASPHYPWPHEGILSS 85

Query: 87  YDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEM 146
           YDHASIRRGHQVY QVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEV DGPNDEGEM
Sbjct: 86  YDHASIRRGHQVYTQVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVEDGPNDEGEM 145

Query: 147 FTRPGKLSDRLPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPSG 206
           FTRPGKLSDR PQPYANE+AARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPP+G
Sbjct: 146 FTRPGKLSDRFPQPYANESAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAG 205

Query: 207 VSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATESQMGKDVVSFLSWAAEPEMEE 266
           VSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATE+QMGKDVVSFLSWAAEPEMEE
Sbjct: 206 VSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEE 265

Query: 267 RKLMGFKWIFVXXXXXXXXXXXXXXXWSVLKSRKLVLDVVN 307
           RKLMGFKWIFV               WSVLKSRKLVLDVVN
Sbjct: 266 RKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKLVLDVVN 306


>Medtr6g023280.1 | cytochrome c1, heme protein | HC |
           chr6:8099938-8099738 | 20130731
          Length = 66

 Score = 99.4 bits (246), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/57 (77%), Positives = 50/57 (87%)

Query: 132 AEIEVVDGPNDEGEMFTRPGKLSDRLPQPYANEAAARFANGGAYPPDLSLITKARHN 188
           +EI VVDGPN+EG+MFT PGKL+DR PQPY NE+AARFANGGA+PPDLSLIT   HN
Sbjct: 2   SEIVVVDGPNNEGKMFTLPGKLNDRFPQPYVNESAARFANGGAFPPDLSLITNMIHN 58


>Medtr6g023270.1 | cytochrome c1 family protein | LC |
           chr6:8097220-8094706 | 20130731
          Length = 158

 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/108 (48%), Positives = 60/108 (55%), Gaps = 23/108 (21%)

Query: 27  IVTKNNDAGSTGSSSIRALALIGAGVSGFLGFATTASA-----------------DEAEH 69
           I+TKN+  GST S S+RA ALIGAGVSGFL FATTASA                 ++   
Sbjct: 40  IITKNDGTGSTSSRSVRAPALIGAGVSGFLCFATTASAINGLTRNQTADVFTKQQNQDNF 99

Query: 70  GLSCPSYPWPHEGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDL 117
            ++  S  W     L       IRRG+Q Y QV A CHSM LISYRDL
Sbjct: 100 TIALSSLGWKTSTNL------QIRRGNQDYTQVYAFCHSMPLISYRDL 141