Miyakogusa Predicted Gene

Lj5g3v0921280.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0921280.1 CUFF.54260.1
         (286 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g053270.1 | tyrosine-tRNA ligase-like protein | HC | chr1:...   421   e-118
Medtr1g007340.1 | tyrosine-tRNA ligase-like protein | LC | chr1:...   383   e-107
Medtr1g007325.1 | tyrosine-tRNA ligase-like protein | HC | chr1:...   135   4e-32

>Medtr1g053270.1 | tyrosine-tRNA ligase-like protein | HC |
           chr1:22344522-22337040 | 20130731
          Length = 384

 Score =  421 bits (1082), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 203/238 (85%), Positives = 210/238 (88%)

Query: 10  LESASVXXXXXXXXXXXXXXXXXXXELRFQIVRSVGEECIQEDELLNLLANKPEPVCYDG 69
           LES SV                   E RF+IVRS+GEECIQEDELLNLLA KP+PVCYDG
Sbjct: 12  LESLSVAESSSTNSNPNPTPQLLSAEQRFEIVRSIGEECIQEDELLNLLAKKPQPVCYDG 71

Query: 70  FEPSGRMHIAQGVMKTINVNKLTSAGCRVKIWIADWFAKLNNKMGGDLKKIEIVGRYLIE 129
           FEPSGRMHIAQGVMKTINVNKLTSAGC VKIWIADWFAKLNNKMGGDLKKIEIVGRYLIE
Sbjct: 72  FEPSGRMHIAQGVMKTINVNKLTSAGCLVKIWIADWFAKLNNKMGGDLKKIEIVGRYLIE 131

Query: 130 IWKAVGMDLEGGKVEFLWSSKEINARAHEYWPLVLDIAQKNNLKRIIRCSQIMGRGEHEE 189
           IWKAVGMDLEGGKVEFLWSSKEINARA EYWPLVLDIAQKNNLKRIIRCSQIMGR E +E
Sbjct: 132 IWKAVGMDLEGGKVEFLWSSKEINARADEYWPLVLDIAQKNNLKRIIRCSQIMGRSEQDE 191

Query: 190 LTAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRRNKPIILSHRIL 247
           LTAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCD IKR+NKP+ILSH +L
Sbjct: 192 LTAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDVIKRKNKPVILSHHML 249


>Medtr1g007340.1 | tyrosine-tRNA ligase-like protein | LC |
           chr1:290174-284592 | 20130731
          Length = 485

 Score =  383 bits (984), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 177/213 (83%), Positives = 193/213 (90%)

Query: 35  ELRFQIVRSVGEECIQEDELLNLLANKPEPVCYDGFEPSGRMHIAQGVMKTINVNKLTSA 94
           E RF+IV S+GEECIQ+DEL NLLANK + VCYDGFEPSGRMHIAQG++K INVNKLTSA
Sbjct: 25  EERFEIVGSIGEECIQDDELFNLLANKKDIVCYDGFEPSGRMHIAQGILKAINVNKLTSA 84

Query: 95  GCRVKIWIADWFAKLNNKMGGDLKKIEIVGRYLIEIWKAVGMDLEGGKVEFLWSSKEINA 154
           GCRVKIW+ADWFAKLNNKMGGDL KI+ VG+Y IEIWKA GMD EGGKVEFLWSSKEIN 
Sbjct: 85  GCRVKIWVADWFAKLNNKMGGDLNKIKTVGQYFIEIWKATGMDFEGGKVEFLWSSKEING 144

Query: 155 RAHEYWPLVLDIAQKNNLKRIIRCSQIMGRGEHEELTAAQIFYPCMQCADIFFLKADICQ 214
            A +YWP VLDIAQ N+LKRI+RCSQIMGR E E+LTA+QIFYPCMQCADIFFL+ADICQ
Sbjct: 145 GADKYWPCVLDIAQNNSLKRIVRCSQIMGRSEQEDLTASQIFYPCMQCADIFFLQADICQ 204

Query: 215 LGMDQRKVNVLAREYCDDIKRRNKPIILSHRIL 247
           LGMDQRKVNVLAREYCD IKRRNKPIILSH +L
Sbjct: 205 LGMDQRKVNVLAREYCDVIKRRNKPIILSHHML 237



 Score =  134 bits (337), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 62/74 (83%), Positives = 67/74 (90%)

Query: 37  RFQIVRSVGEECIQEDELLNLLANKPEPVCYDGFEPSGRMHIAQGVMKTINVNKLTSAGC 96
           RF+ V+SVGEEC QEDELLN+LANKPEPVCYDGFE SGRM IAQG+MKTI+ NKL SAGC
Sbjct: 407 RFETVKSVGEECTQEDELLNILANKPEPVCYDGFELSGRMDIAQGIMKTIHANKLVSAGC 466

Query: 97  RVKIWIADWFAKLN 110
           RVKI IADWFAKLN
Sbjct: 467 RVKIVIADWFAKLN 480


>Medtr1g007325.1 | tyrosine-tRNA ligase-like protein | HC |
           chr1:284325-281812 | 20130731
          Length = 236

 Score =  135 bits (340), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 67/121 (55%), Positives = 85/121 (70%), Gaps = 20/121 (16%)

Query: 127 LIEIWKAVGMDLEGGKVEFLWSSKEINARAHEYWPLVLDIAQKNNLKRIIRCSQIMGRGE 186
           +IE+WKA+GMD+EGGKVEFLWSSKEI+ARA EYWPLVLDIAQK +++RI+ CS+IMGR E
Sbjct: 1   MIEVWKAIGMDMEGGKVEFLWSSKEIDARADEYWPLVLDIAQKFSVQRILSCSEIMGRSE 60

Query: 187 HEELTAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRRNKPIILSHRI 246
           +                    +K  +  L      +NVLAR+YCD IKR+NKP+ILSH +
Sbjct: 61  N--------------------MKNPLVLLKYSIHALNVLARDYCDIIKRKNKPVILSHNM 100

Query: 247 L 247
           L
Sbjct: 101 L 101