Miyakogusa Predicted Gene

Lj5g3v0921240.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0921240.2 tr|B7FYR9|B7FYR9_PHATC Predicted protein
OS=Phaeodactylum tricornutum (strain CCAP 1055/1)
GN=PHATRD,29.47,0.00000000000002,seg,NULL; PAP_fibrillin,Plastid
lipid-associated protein/fibrillin conserved domain,CUFF.54257.2
         (299 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g054070.1 | plastid lipid-associated protein | HC | chr1:2...   456   e-129
Medtr1g054070.2 | plastid lipid-associated protein | HC | chr1:2...   436   e-122

>Medtr1g054070.1 | plastid lipid-associated protein | HC |
           chr1:23052971-23048464 | 20130731
          Length = 297

 Score =  456 bits (1174), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 223/289 (77%), Positives = 249/289 (86%), Gaps = 5/289 (1%)

Query: 12  HPCISAISTC-IPFXXXXXXXXWKVSASPRTRHGGCCRAMVQIQTGAPAAYAKEMERLSA 70
           HPCIS I+ C IP          +++   R    G C+AMVQ+QTGAPAAYAKEMERLSA
Sbjct: 13  HPCISTITNCSIPSSSSWKVSTSRITWQKR----GVCKAMVQVQTGAPAAYAKEMERLSA 68

Query: 71  KESLLLAFKDAGGFEALVSGKTTEYQKIDVNERITGLERLNPTPRPTTSPFLEGRWNFEW 130
           KESLLLAFKDAGGFE LVSGKTTEYQ+IDVNERITGLERLNPTPRPTTSPFLEGRWNFEW
Sbjct: 69  KESLLLAFKDAGGFEGLVSGKTTEYQRIDVNERITGLERLNPTPRPTTSPFLEGRWNFEW 128

Query: 131 FGPGTPGLFAARLIFENFPSSLANLSKLDVVIKDGNAKITANTRYLNSIESKIILSTKLS 190
           FGPG+PGLFAAR+IFENFPSSLANLSK+DV IKDGNAKITANT +LNS+ES+IILSTKL+
Sbjct: 129 FGPGSPGLFAARMIFENFPSSLANLSKMDVFIKDGNAKITANTLFLNSVESRIILSTKLT 188

Query: 191 VEGPLRMKEEYVEGVLVSPTVIEERVPEQIKXXXXXXXXXXXXXPVPIRDAVASGLKVPL 250
           VEGPLRMKEEYVEG++VSPTV+E+RVP+Q+K             PVP+RDA+A GLKVPL
Sbjct: 189 VEGPLRMKEEYVEGIIVSPTVLEDRVPDQLKGALGQAVNVLQQLPVPLRDALADGLKVPL 248

Query: 251 SGSIQRLFMISYLDEEILIIRDTAGMPEVLTRLDASPSSIGESGPDYES 299
           SGS QRLFMISYLDEEILIIR+TAG+PEVLTRLDASPSS+GES P+YES
Sbjct: 249 SGSFQRLFMISYLDEEILIIRNTAGIPEVLTRLDASPSSLGESSPEYES 297


>Medtr1g054070.2 | plastid lipid-associated protein | HC |
           chr1:23052941-23048544 | 20130731
          Length = 290

 Score =  436 bits (1121), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 216/289 (74%), Positives = 242/289 (83%), Gaps = 12/289 (4%)

Query: 12  HPCISAISTC-IPFXXXXXXXXWKVSASPRTRHGGCCRAMVQIQTGAPAAYAKEMERLSA 70
           HPCIS I+ C IP          +++   R    G C+AMVQ+QTGAPAAYAKEMERLSA
Sbjct: 13  HPCISTITNCSIPSSSSWKVSTSRITWQKR----GVCKAMVQVQTGAPAAYAKEMERLSA 68

Query: 71  KESLLLAFKDAGGFEALVSGKTTEYQKIDVNERITGLERLNPTPRPTTSPFLEGRWNFEW 130
           KESLLLAFKDAGGFE LVSGKTTEYQ+IDVNERITGLERLNPTPRPTT       WNFEW
Sbjct: 69  KESLLLAFKDAGGFEGLVSGKTTEYQRIDVNERITGLERLNPTPRPTT-------WNFEW 121

Query: 131 FGPGTPGLFAARLIFENFPSSLANLSKLDVVIKDGNAKITANTRYLNSIESKIILSTKLS 190
           FGPG+PGLFAAR+IFENFPSSLANLSK+DV IKDGNAKITANT +LNS+ES+IILSTKL+
Sbjct: 122 FGPGSPGLFAARMIFENFPSSLANLSKMDVFIKDGNAKITANTLFLNSVESRIILSTKLT 181

Query: 191 VEGPLRMKEEYVEGVLVSPTVIEERVPEQIKXXXXXXXXXXXXXPVPIRDAVASGLKVPL 250
           VEGPLRMKEEYVEG++VSPTV+E+RVP+Q+K             PVP+RDA+A GLKVPL
Sbjct: 182 VEGPLRMKEEYVEGIIVSPTVLEDRVPDQLKGALGQAVNVLQQLPVPLRDALADGLKVPL 241

Query: 251 SGSIQRLFMISYLDEEILIIRDTAGMPEVLTRLDASPSSIGESGPDYES 299
           SGS QRLFMISYLDEEILIIR+TAG+PEVLTRLDASPSS+GES P+YES
Sbjct: 242 SGSFQRLFMISYLDEEILIIRNTAGIPEVLTRLDASPSSLGESSPEYES 290