Miyakogusa Predicted Gene

Lj5g3v0920980.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0920980.1 Non Characterized Hit- tr|A2YZ98|A2YZ98_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,33.89,1e-18,coiled-coil,NULL; seg,NULL,CUFF.54228.1
         (337 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g053910.1 | hypothetical protein | HC | chr1:22887339-2288...   379   e-105
Medtr5g014110.1 | hypothetical protein | HC | chr5:4688772-46869...    52   6e-07

>Medtr1g053910.1 | hypothetical protein | HC |
           chr1:22887339-22885723 | 20130731
          Length = 342

 Score =  379 bits (972), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 221/347 (63%), Positives = 245/347 (70%), Gaps = 34/347 (9%)

Query: 1   MKASLKFRDEQKKPLFRAKVPLSVLGMPFQSGIVAGDSKELTLNLATFFQSGPSIRASYR 60
           MKASLKFRDEQKKPL RAKVPLS+LG PFQSGIVAGDSKELTLNL+TFFQSGP+++ +YR
Sbjct: 1   MKASLKFRDEQKKPLLRAKVPLSILGTPFQSGIVAGDSKELTLNLSTFFQSGPTLKLAYR 60

Query: 61  PNDSKNPFSVVVKTGTGPFGSPLSGSMLMSCEFNLLAR-----SGGPLFMLHFKPRFGDF 115
           PNDS+NPFS++VKTGTGPFGSP+S SMLMSCEFNLL R     S  PLFMLHFKPRFGDF
Sbjct: 61  PNDSQNPFSLIVKTGTGPFGSPMSSSMLMSCEFNLLNRNDKTGSPQPLFMLHFKPRFGDF 120

Query: 116 TFKKTQXXXXXXXXXX------XXXXXXXXXXVVEKPVIGSFSAGKVPIFGSDSPAAGAI 169
           +FKKTQ                           VE PVIG FS GKV       P+AGAI
Sbjct: 121 SFKKTQSSILDVKGYAFPQNGGVLGNDDTKFEFVESPVIGGFSVGKV-------PSAGAI 173

Query: 170 VSAFSGMEVAARTTLPVRGRAAVNFRWGVRVPAEVKAIGNNSSGAFQRIPFLVMDKIGFE 229
              FSG EVAART +P+RGRAAVNFRWGVRVPAEVK        AF R+PFLVMDKIG E
Sbjct: 174 AGLFSGTEVAARTRVPIRGRAAVNFRWGVRVPAEVKG-----ESAFGRVPFLVMDKIGVE 228

Query: 230 LLPELNG---ELKKGNGGASEGSGFVAGSDVAEACLAVKRQMEVLQLENGSLRSAVEDLR 286
            LP   G    LKKG  GA+ G G    +DVAE C AVKRQMEVLQ ENG LR+AVEDLR
Sbjct: 229 HLPAECGNLKNLKKGKVGAA-GVGVPTSADVAETCFAVKRQMEVLQAENGLLRNAVEDLR 287

Query: 287 REIGGGRYRKIEKSVVKGKNTDGRKNEKKTAPDFSGFPGKSLESDVA 333
           RE    R       +  GK+ +GRKNEKKT  DFSG+PGKS E+D +
Sbjct: 288 REFASVR-------IGGGKSFEGRKNEKKTGSDFSGYPGKSTEADAS 327


>Medtr5g014110.1 | hypothetical protein | HC | chr5:4688772-4686988
           | 20130731
          Length = 360

 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 24/143 (16%)

Query: 178 VAARTTLPVRGRAAVNFRWGVRVPAEVKAIGNNSSGAFQRIPFLVMDKIGFELLPELNGE 237
           V ART +PV     +NFRWGV  P +          +  ++P+L ++KIG E + E+  +
Sbjct: 209 VMARTVMPVTQGLLLNFRWGVSFPGK----------SVLKMPYLAVNKIGLERVEEMKKD 258

Query: 238 LKKGNGGASEGSGFVAGSDVAEACLAVKRQMEVLQLENGSLRSAVEDLRREIGGGRYRKI 297
            +  N    EG+         +    +K  +E ++ EN  ++  +++++  +  G+  K 
Sbjct: 259 -EWNNDDNCEGN--------LQVLKEMKIDLENVEKENKEMKRVLDEMKMGVSKGKVSKQ 309

Query: 298 ----EKSVVKGKNTDGRK-NEKK 315
               E     G N +GRK NEKK
Sbjct: 310 KHAGESVQSWGSNKNGRKENEKK 332



 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 15/135 (11%)

Query: 1   MKASLKFR---DEQKKP---LFRAKVPLSVLGMPFQSGIVAGD---SKELTLNLATFFQS 51
           MK SLKF+   + Q+ P   +  AKVP+++   P  S I A +   + + + +L+T F +
Sbjct: 1   MKLSLKFQNNNENQQTPQTQIMTAKVPITIFNNPLLSTITATNNYSTSDFSFSLSTNFPT 60

Query: 52  GPSIRASYRPNDSKNPFSVVVKT--GTGPFGSPLSGSMLMSCEF----NLLARSGGPLFM 105
           GP+ + SY P  + +     +    G G FGSP    ++ S  F       +    P F 
Sbjct: 61  GPTFKLSYTPTTTSSSLPFSLSLKSGLGLFGSPNHSPLVFSANFSLSSLSSSTPLLPSFS 120

Query: 106 LHFKPRFGDFTFKKT 120
           LHFKP+FG F+  KT
Sbjct: 121 LHFKPQFGHFSLHKT 135