Miyakogusa Predicted Gene

Lj5g3v0875710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0875710.1 tr|Q8H2U6|Q8H2U6_ORYSJ Os07g0661700 protein
OS=Oryza sativa subsp. japonica GN=P0453E03.109 PE=4
SV=,52.81,0.00000000000001,coiled-coil,NULL,CUFF.54141.1
         (113 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g052270.1 | hypothetical protein | HC | chr1:21144838-2114...   168   1e-42
Medtr1g052270.2 | hypothetical protein | HC | chr1:21144838-2114...   152   5e-38

>Medtr1g052270.1 | hypothetical protein | HC |
           chr1:21144838-21148758 | 20130731
          Length = 116

 Score =  168 bits (425), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 89/113 (78%), Positives = 102/113 (90%)

Query: 1   MVESVKLCDLELTLKPFYQRASEAEDRLSRLEAAFNSRKDTGNEEESKVINDLQSKLKDA 60
           MVESVK+ +LE+TLKPFY+RASEAE+RLSRLEAA NSRKDT + E+ KV+NDLQSKL+ A
Sbjct: 1   MVESVKVNELEVTLKPFYRRASEAEERLSRLEAAINSRKDTESGEQLKVVNDLQSKLEVA 60

Query: 61  NAELISEKEKVQMLAAENEKLQNRIIHLVRALKDADLKLEQVSAGEQLESLKL 113
           NAELISEK K Q+LAAENEKLQ RIIHL+R+LK+ADLKLEQV A EQLESLKL
Sbjct: 61  NAELISEKRKAQVLAAENEKLQYRIIHLLRSLKNADLKLEQVKAQEQLESLKL 113


>Medtr1g052270.2 | hypothetical protein | HC |
           chr1:21144838-21148725 | 20130731
          Length = 114

 Score =  152 bits (385), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 79/101 (78%), Positives = 92/101 (91%)

Query: 1   MVESVKLCDLELTLKPFYQRASEAEDRLSRLEAAFNSRKDTGNEEESKVINDLQSKLKDA 60
           MVESVK+ +LE+TLKPFY+RASEAE+RLSRLEAA NSRKDT + E+ KV+NDLQSKL+ A
Sbjct: 1   MVESVKVNELEVTLKPFYRRASEAEERLSRLEAAINSRKDTESGEQLKVVNDLQSKLEVA 60

Query: 61  NAELISEKEKVQMLAAENEKLQNRIIHLVRALKDADLKLEQ 101
           NAELISEK K Q+LAAENEKLQ RIIHL+R+LK+ADLKLEQ
Sbjct: 61  NAELISEKRKAQVLAAENEKLQYRIIHLLRSLKNADLKLEQ 101