Miyakogusa Predicted Gene
- Lj5g3v0875570.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0875570.1 Non Characterized Hit- tr|H3I0N7|H3I0N7_STRPU
Uncharacterized protein OS=Strongylocentrotus purpurat,24.68,0.001,no
description,EF-hand-like domain; EF_hand_4,NULL;
EF_hand_3,EF-hand-like domain; CALCIUM-BINDING E,CUFF.54151.1
(296 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g051895.1 | calcium-binding EF-hand protein | HC | chr1:20... 372 e-103
Medtr1g051895.2 | calcium-binding EF-hand protein | HC | chr1:20... 297 1e-80
Medtr2g086560.1 | calcium-binding EF-hand protein | HC | chr2:36... 206 2e-53
Medtr2g105130.1 | calcium-binding EF-hand protein | HC | chr2:45... 195 5e-50
Medtr1g051895.3 | calcium-binding EF-hand protein | HC | chr1:20... 178 4e-45
Medtr2g086560.2 | calcium-binding EF-hand protein | HC | chr2:36... 160 2e-39
Medtr2g086560.3 | calcium-binding EF-hand protein | HC | chr2:36... 153 2e-37
Medtr1g076650.1 | EF hand calcium-binding family protein | HC | ... 50 3e-06
Medtr7g074020.1 | EF hand calcium-binding family protein | HC | ... 50 3e-06
Medtr7g074020.2 | EF hand calcium-binding family protein | HC | ... 49 4e-06
Medtr6g007613.2 | EF hand calcium-binding family protein | HC | ... 49 8e-06
Medtr6g007613.1 | EF hand calcium-binding family protein | HC | ... 49 8e-06
>Medtr1g051895.1 | calcium-binding EF-hand protein | HC |
chr1:20793375-20787827 | 20130731
Length = 305
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 175/183 (95%), Positives = 181/183 (98%)
Query: 114 FASLVPSVFPPGTDPSIVACFQVADQDGSGLIDDKELQRALSSYNQSFSLRTVHLLMFHF 173
FASLVPS FPPGTDPSIVACFQVADQDGSGLIDDKELQRALSSYNQSFSLRTVHLLM+HF
Sbjct: 123 FASLVPSTFPPGTDPSIVACFQVADQDGSGLIDDKELQRALSSYNQSFSLRTVHLLMYHF 182
Query: 174 TNTNVKKIGPKEFTSLFYSLQNWRGIFERFDKDRSGKIDSNELRDALLSLGYAVSPVVLE 233
TNTNVKKIGPKEFTSLFYSLQ+WRGIFERFDKDRSGKIDSNELRDALLSLGYAVSPVVL+
Sbjct: 183 TNTNVKKIGPKEFTSLFYSLQSWRGIFERFDKDRSGKIDSNELRDALLSLGYAVSPVVLD 242
Query: 234 LLVSKFDKTGGKSKAIEYDNFIECCLTVKGLTDKFKEKDTAYTGSATFSYESFMLTVLPF 293
LLVSKFDKTGGK+KA+EYDNFIECCLTVKGLTDKFKEKDT YTGSATFSYE+FMLTVLPF
Sbjct: 243 LLVSKFDKTGGKNKAVEYDNFIECCLTVKGLTDKFKEKDTGYTGSATFSYEAFMLTVLPF 302
Query: 294 LIA 296
LIA
Sbjct: 303 LIA 305
>Medtr1g051895.2 | calcium-binding EF-hand protein | HC |
chr1:20793275-20788287 | 20130731
Length = 282
Score = 297 bits (760), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 138/148 (93%), Positives = 143/148 (96%)
Query: 114 FASLVPSVFPPGTDPSIVACFQVADQDGSGLIDDKELQRALSSYNQSFSLRTVHLLMFHF 173
FASLVPS FPPGTDPSIVACFQVADQDGSGLIDDKELQRALSSYNQSFSLRTVHLLM+HF
Sbjct: 123 FASLVPSTFPPGTDPSIVACFQVADQDGSGLIDDKELQRALSSYNQSFSLRTVHLLMYHF 182
Query: 174 TNTNVKKIGPKEFTSLFYSLQNWRGIFERFDKDRSGKIDSNELRDALLSLGYAVSPVVLE 233
TNTNVKKIGPKEFTSLFYSLQ+WRGIFERFDKDRSGKIDSNELRDALLSLGYAVSPVVL+
Sbjct: 183 TNTNVKKIGPKEFTSLFYSLQSWRGIFERFDKDRSGKIDSNELRDALLSLGYAVSPVVLD 242
Query: 234 LLVSKFDKTGGKSKAIEYDNFIECCLTV 261
LLVSKFDKTGGK+KA+EYDNFIE C
Sbjct: 243 LLVSKFDKTGGKNKAVEYDNFIEYCFAT 270
>Medtr2g086560.1 | calcium-binding EF-hand protein | HC |
chr2:36396297-36391847 | 20130731
Length = 265
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/176 (55%), Positives = 131/176 (74%), Gaps = 1/176 (0%)
Query: 122 FPPGTDPSIVACFQVADQDGSGLIDDKELQRALSSYNQSFSLRTVHLLMFHFTNTNVK-K 180
FPPGT+ ++ FQ+ D+D SG IDD+ELQ+ALSS SF+LRT+ LLMF F + + +
Sbjct: 88 FPPGTNQDVIRSFQMVDRDRSGFIDDRELQQALSSSFHSFNLRTIRLLMFLFKHPHESLR 147
Query: 181 IGPKEFTSLFYSLQNWRGIFERFDKDRSGKIDSNELRDALLSLGYAVSPVVLELLVSKFD 240
IGPKEFT L+ L +WRGIFER+DKDRSGKID ELRDAL +GYAV VL+LL+SK+
Sbjct: 148 IGPKEFTELWNCLGHWRGIFERYDKDRSGKIDPLELRDALYGIGYAVPASVLQLLLSKYS 207
Query: 241 KTGGKSKAIEYDNFIECCLTVKGLTDKFKEKDTAYTGSATFSYESFMLTVLPFLIA 296
+ + +D+F+EC + +KGLTDKFK+KD Y+GSAT +Y+ FM V+PFL++
Sbjct: 208 DGNNRRVELGFDSFVECGMIIKGLTDKFKDKDKRYSGSATLAYDDFMSMVIPFLVS 263
>Medtr2g105130.1 | calcium-binding EF-hand protein | HC |
chr2:45335444-45333503 | 20130731
Length = 127
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 96/118 (81%), Positives = 105/118 (88%)
Query: 177 NVKKIGPKEFTSLFYSLQNWRGIFERFDKDRSGKIDSNELRDALLSLGYAVSPVVLELLV 236
N K PKEFTSLFYSLQ+WRGIFE FDKDRSG+I+S ELRDALLSLGYAVSP+VL+LLV
Sbjct: 5 NAKGRRPKEFTSLFYSLQSWRGIFETFDKDRSGRINSIELRDALLSLGYAVSPMVLDLLV 64
Query: 237 SKFDKTGGKSKAIEYDNFIECCLTVKGLTDKFKEKDTAYTGSATFSYESFMLTVLPFL 294
SKFDKTGGKSKAIEYDNFIECCLTVKGLTDKFKEKDT YTG ATFSYE + ++ +L
Sbjct: 65 SKFDKTGGKSKAIEYDNFIECCLTVKGLTDKFKEKDTGYTGFATFSYEYQLSMLIAWL 122
>Medtr1g051895.3 | calcium-binding EF-hand protein | HC |
chr1:20793275-20789582 | 20130731
Length = 259
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 83/90 (92%), Positives = 86/90 (95%), Gaps = 1/90 (1%)
Query: 114 FASLVPSVFPPGTDPSIVACFQVADQDGSGLIDDKELQRALSSYNQSFSLRTVHLLMFHF 173
FASLVPS FPPGTDPSIVACFQVADQDGSGLIDDKELQRALSSYNQSFSLRTVHLLM+HF
Sbjct: 123 FASLVPSTFPPGTDPSIVACFQVADQDGSGLIDDKELQRALSSYNQSFSLRTVHLLMYHF 182
Query: 174 TNTNVKKIGPKEFTSLFYSLQNWRGIFERF 203
TNTNVKKIGPKEFTSLFYSLQ+WR +F F
Sbjct: 183 TNTNVKKIGPKEFTSLFYSLQSWR-VFSSF 211
>Medtr2g086560.2 | calcium-binding EF-hand protein | HC |
chr2:36396247-36391884 | 20130731
Length = 252
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
Query: 122 FPPGTDPSIVACFQVADQDGSGLIDDKELQRALSSYNQSFSLRTVHLLMFHFTNTNVK-K 180
FPPGT+ ++ FQ+ D+D SG IDD+ELQ+ALSS SF+LRT+ LLMF F + + +
Sbjct: 88 FPPGTNQDVIRSFQMVDRDRSGFIDDRELQQALSSSFHSFNLRTIRLLMFLFKHPHESLR 147
Query: 181 IGPKEFTSLFYSLQNWRGIFERFDKDRSGKIDSNELRDALLSLGYAVSPVVLELLVSKFD 240
IGPKEFT L+ L +WRGIFER+DKDRSGKID ELRDAL +GYAV VL+LL+SK+
Sbjct: 148 IGPKEFTELWNCLGHWRGIFERYDKDRSGKIDPLELRDALYGIGYAVPASVLQLLLSKYS 207
Query: 241 KTGGKSKAIEYDNFIECCLTVK 262
+ + +D+F+EC + +K
Sbjct: 208 DGNNRRVELGFDSFVECGMIIK 229
>Medtr2g086560.3 | calcium-binding EF-hand protein | HC |
chr2:36396297-36392048 | 20130731
Length = 223
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
Query: 122 FPPGTDPSIVACFQVADQDGSGLIDDKELQRALSSYNQSFSLRTVHLLMFHFTNTNVK-K 180
FPPGT+ ++ FQ+ D+D SG IDD+ELQ+ALSS SF+LRT+ LLMF F + + +
Sbjct: 88 FPPGTNQDVIRSFQMVDRDRSGFIDDRELQQALSSSFHSFNLRTIRLLMFLFKHPHESLR 147
Query: 181 IGPKEFTSLFYSLQNWRGIFERFDKDRSGKIDSNELRDALLSLGYAVSPVVLELLVSKFD 240
IGPKEFT L+ L +WRGIFER+DKDRSGKID ELRDAL +GYAV VL+LL+SK+
Sbjct: 148 IGPKEFTELWNCLGHWRGIFERYDKDRSGKIDPLELRDALYGIGYAVPASVLQLLLSKYS 207
Query: 241 KTGGKSKAIEYDNFIE 256
+ + +D+F+E
Sbjct: 208 DGNNRRVELGFDSFVE 223
>Medtr1g076650.1 | EF hand calcium-binding family protein | HC |
chr1:34182689-34184175 | 20130731
Length = 150
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 133 CFQVADQDGSGLIDDKELQRALSSYNQSFSLRTVHLLMFHFTNTNVKKIGPKEFTSLFY- 191
F + D+DG G I +EL + S +Q+ + + ++ I EF +L
Sbjct: 16 AFSLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLNLMAR 75
Query: 192 ------SLQNWRGIFERFDKDRSGKIDSNELRDALLSLGYAVSPVVLELLVSKFDKTGGK 245
+ + R F+ FDKD++G I ++ELR +++LG +S +E ++ + D G
Sbjct: 76 KMKDTDAEEELREAFKVFDKDQNGYISASELRHVMINLGEKLSDEEVEQMIKEADMDG-- 133
Query: 246 SKAIEYDNFIECCLTVK 262
+++D F++ +T++
Sbjct: 134 DGQVDFDEFVKMMMTIR 150
>Medtr7g074020.1 | EF hand calcium-binding family protein | HC |
chr7:27634965-27638007 | 20130731
Length = 171
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 177 NVKKIGPKEFTSLFYSLQNWRGIFERFDKDRSGKIDSNELRDALLSLGYAVSPVVLELLV 236
N K+ G T Q + FE FD D SG ID+ EL A+ +LG+ ++ +E ++
Sbjct: 14 NNKQRGKHHLTQ--QKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQIEQMI 71
Query: 237 SKFDKTGGKSKAIEYDNFIECCLTVK 262
+ DK G S AI+YD F E +T K
Sbjct: 72 ADVDKDG--SGAIDYDEF-EHMMTAK 94
>Medtr7g074020.2 | EF hand calcium-binding family protein | HC |
chr7:27634965-27637929 | 20130731
Length = 161
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 177 NVKKIGPKEFTSLFYSLQNWRGIFERFDKDRSGKIDSNELRDALLSLGYAVSPVVLELLV 236
N K+ G T Q + FE FD D SG ID+ EL A+ +LG+ ++ +E ++
Sbjct: 14 NNKQRGKHHLTQ--QKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQIEQMI 71
Query: 237 SKFDKTGGKSKAIEYDNFIECCLTVK 262
+ DK G S AI+YD F E +T K
Sbjct: 72 ADVDKDG--SGAIDYDEF-EHMMTAK 94
>Medtr6g007613.2 | EF hand calcium-binding family protein | HC |
chr6:1680394-1679060 | 20130731
Length = 158
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 194 QNWRGIFERFDKDRSGKIDSNELRDALLSLGYAVSPVVLELLVSKFDKTGGKSKAIEYDN 253
Q + FE FD D SG ID+ EL A+ +LG+ ++ +E +++ DK G S AI+YD
Sbjct: 28 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQIEQMIADVDKDG--SGAIDYDE 85
Query: 254 FIECCLTVK 262
F E +T K
Sbjct: 86 F-EHMMTAK 93
>Medtr6g007613.1 | EF hand calcium-binding family protein | HC |
chr6:1680394-1677597 | 20130731
Length = 170
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 194 QNWRGIFERFDKDRSGKIDSNELRDALLSLGYAVSPVVLELLVSKFDKTGGKSKAIEYDN 253
Q + FE FD D SG ID+ EL A+ +LG+ ++ +E +++ DK G S AI+YD
Sbjct: 28 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQIEQMIADVDKDG--SGAIDYDE 85
Query: 254 FIECCLTVK 262
F E +T K
Sbjct: 86 F-EHMMTAK 93