Miyakogusa Predicted Gene

Lj5g3v0845560.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0845560.1 Non Characterized Hit- tr|G7KD20|G7KD20_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,77.59,2e-16,seg,NULL; Apc5,Anaphase-promoting complex
subunit 5,TPR-containing domain; SUBFAMILY NOT
NAMED,NULL;,gene.g60182.t1.1
         (651 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g091020.1 | anaphase-promoting complex subunit 5 | HC | ch...   696   0.0  

>Medtr5g091020.1 | anaphase-promoting complex subunit 5 | HC |
           chr5:39660837-39673775 | 20130731
          Length = 922

 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/442 (80%), Positives = 379/442 (85%), Gaps = 24/442 (5%)

Query: 233 KFEVKKHVQRPLLSFGPKTSMKLSTCPVNVSKELRLSSHLISDFTSESSPMTIDGAFSTA 292
           KF++  HVQRPLLSFGPK+SMKLSTCPVNVSKELRLSSHLISDF++ESS MTIDGAFSTA
Sbjct: 482 KFDLT-HVQRPLLSFGPKSSMKLSTCPVNVSKELRLSSHLISDFSTESSAMTIDGAFSTA 540

Query: 293 WLRNLQKPVGSPVLCQENGSGNNSNVSQFCAQPTSIPGSVLQVLGSSCILRATAWELYGS 352
           WLRNLQKP GS + CQ++GSGN+SN+ QFCAQPTSIPGSVLQVLGSS ILRATAWELYGS
Sbjct: 541 WLRNLQKPNGSNIFCQDSGSGNSSNIPQFCAQPTSIPGSVLQVLGSSYILRATAWELYGS 600

Query: 353 S--------------------ADAALAYVKLIQHLAVFKGYKEAFSALKIAEEKFXXXXX 392
           +                    +DAALAYVKLIQHLAVFKGYKEAFSALKIAEEKF     
Sbjct: 601 TPMSRINALVHATCFADASSSSDAALAYVKLIQHLAVFKGYKEAFSALKIAEEKFLSVSK 660

Query: 393 XXXXXXXXXXXHEHALHRGRLKLAQKLCDELSVLASPVTGVDMVLKTEASLRHARTLLAA 452
                      HEHALH GRLKLAQKLCDEL  LASPVTGVDM +KTEASLRHARTLLAA
Sbjct: 661 SQIILLKLQLLHEHALHGGRLKLAQKLCDELGALASPVTGVDMEIKTEASLRHARTLLAA 720

Query: 453 KQFREAAAVAHSLFCMCYKYNLQVENASVLLLLAEIHKKSGNAVLGLPYALASLSFCTSF 512
           KQFREAA+VAHSLFCMCYKYNLQV NASVLLLLAEIHKKSGNAVLG+PYALASLSFC SF
Sbjct: 721 KQFREAASVAHSLFCMCYKYNLQVHNASVLLLLAEIHKKSGNAVLGIPYALASLSFCISF 780

Query: 513 NLDLLKASATLTLAELWLSLGSNHATRALNLVHGAFPMILGHGGLELRSRAYIVEAKCYL 572
           NLDLLKASATLTLAELWLSLGS+HATRALNLV GAFP+ILGHGGLELRSRAYIVEAKCYL
Sbjct: 781 NLDLLKASATLTLAELWLSLGSSHATRALNLVRGAFPIILGHGGLELRSRAYIVEAKCYL 840

Query: 573 CNTNFN---NYNIVIDPLRQASEELQLLEFHELAAEAFYLMAMVYDKLGQYEEREEAAAS 629
           C+TNFN   +YN VID L+QASEELQ LEFHELAAEAFYLMAMVYDKLGQ EEREEAA S
Sbjct: 841 CDTNFNVGEDYNFVIDSLKQASEELQPLEFHELAAEAFYLMAMVYDKLGQLEEREEAATS 900

Query: 630 FQKHTLALDNPQDQDDPLISTF 651
           FQKH LAL+N QD DDPL+S +
Sbjct: 901 FQKHILALNNLQDHDDPLVSIY 922



 Score =  192 bits (488), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 116/259 (44%), Positives = 134/259 (51%), Gaps = 95/259 (36%)

Query: 1   MFLRRCILAFNLLSFEGICYLLTSIGMYCKD-FSNCSPYEEPSLDDSSSNIETHPEYENT 59
           +FLRRCILAFNLL FEG+C LLT+IG+YCK+ FS+  PYEE SLD SSSN+ET+ EYEN 
Sbjct: 137 IFLRRCILAFNLLPFEGVCRLLTNIGIYCKEEFSSIPPYEETSLDGSSSNLETYSEYENM 196

Query: 60  DLENFVYEKVSEEIDARKEASERVLFFCSSERIGSYKDQDFTSELNPSFLFRYFSLGLSV 119
           DLENF Y+KVSEEI+ARKEAS RV F   +                              
Sbjct: 197 DLENFFYDKVSEEIEARKEASGRVPFHLHT------------------------------ 226

Query: 120 YAFAFGPSLQPNDVTVLITAKLTCTDIDVPADSVSKRSEKFRVDSPYGDPPSNMLRDTDS 179
                     PN +  L+       DIDVPADS SK+S+K RV SPY D  SNM+RD D 
Sbjct: 227 ----------PNALLSLV------DDIDVPADSASKQSDKLRVGSPYEDRHSNMVRDIDP 270

Query: 180 GGL------------------------------------------------VHFLSHLNG 191
            G                                                 VHFLS+LN 
Sbjct: 271 SGAVFLRTNWQIQGYLQEHADTIEKNGSAVSLNGFEIVLRQLQKLAPELHRVHFLSYLNA 330

Query: 192 LAHDDYIAALENLHCYFDY 210
           L+HDDY AALENLHCYFDY
Sbjct: 331 LSHDDYTAALENLHCYFDY 349