Miyakogusa Predicted Gene

Lj5g3v0841320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0841320.1 Non Characterized Hit- tr|I1H3M4|I1H3M4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,48.48,3e-18,Domain involved in innate immunity and
lipid,MD-2-related lipid-recognition;
E1_DerP2_DerF2,MD-2-rel,NODE_45059_length_496_cov_175.022171.path1.1
         (116 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g055425.1 | MD-like lipid recognition domain protein/ML do...   172   5e-44
Medtr1g055435.1 | MD-like lipid recognition domain protein/ML do...   172   5e-44
Medtr4g050400.1 | leguminosin group578 secreted peptide | HC | c...   117   3e-27
Medtr5g085900.1 | MD-like lipid recognition domain protein/ML do...    85   2e-17

>Medtr1g055425.1 | MD-like lipid recognition domain protein/ML
           domain protein | HC | chr1:24551966-24554982 | 20130731
          Length = 155

 Score =  172 bits (437), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 76/99 (76%), Positives = 89/99 (89%)

Query: 18  HAFATATDVHYCDKKADYDVEVKGVEISPDPVARGQPATFSIAAATSQALSGGKLVIDVS 77
            AF  ATDVHYCDKKA YD+EVK V+ISPDP+ARG+PATF+I+A T+Q LSGGK++IDVS
Sbjct: 21  QAFTDATDVHYCDKKASYDIEVKEVQISPDPIARGRPATFTISATTNQTLSGGKVLIDVS 80

Query: 78  YFGWHVYSETHDLCGETPCPVSAGNFVIAHSQVLPGFTP 116
           YFGWHVYSET DLCGE+ CP+S G+FV+AHSQVLPGFTP
Sbjct: 81  YFGWHVYSETKDLCGESSCPISVGDFVLAHSQVLPGFTP 119


>Medtr1g055435.1 | MD-like lipid recognition domain protein/ML
           domain protein | HC | chr1:24562031-24565237 | 20130731
          Length = 156

 Score =  172 bits (437), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 79/99 (79%), Positives = 88/99 (88%)

Query: 18  HAFATATDVHYCDKKADYDVEVKGVEISPDPVARGQPATFSIAAATSQALSGGKLVIDVS 77
            AF  ATDVHYC KK  YDV+VKGV+ISPDPVARGQPATF+I+A TSQALS GKLV+DVS
Sbjct: 22  QAFTDATDVHYCGKKDSYDVQVKGVQISPDPVARGQPATFTISANTSQALSEGKLVVDVS 81

Query: 78  YFGWHVYSETHDLCGETPCPVSAGNFVIAHSQVLPGFTP 116
           YFGWHVYSETHDLCGE+ CP+S G+FVIAHSQVLP +TP
Sbjct: 82  YFGWHVYSETHDLCGESSCPISVGDFVIAHSQVLPAYTP 120


>Medtr4g050400.1 | leguminosin group578 secreted peptide | HC |
           chr4:17844530-17842530 | 20130731
          Length = 155

 Score =  117 bits (292), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 56/89 (62%), Positives = 66/89 (74%)

Query: 28  YCDKKADYDVEVKGVEISPDPVARGQPATFSIAAATSQALSGGKLVIDVSYFGWHVYSET 87
           YCDKKADY V+V G+EI P+PV  G PATF I+A + +AL GG +VI VSY G  V+SET
Sbjct: 30  YCDKKADYPVKVTGIEILPNPVVSGAPATFKISATSGKALYGGDVVIGVSYVGVPVHSET 89

Query: 88  HDLCGETPCPVSAGNFVIAHSQVLPGFTP 116
            DLC E  CPV+ GNFVI+HSQ LP  TP
Sbjct: 90  IDLCKEVSCPVANGNFVISHSQTLPAITP 118


>Medtr5g085900.1 | MD-like lipid recognition domain protein/ML
           domain protein | HC | chr5:37125563-37128450 | 20130731
          Length = 162

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 2/101 (1%)

Query: 18  HAFATATDVHYCDKKADYDVEVKGVEISPDPVARGQPATFSIAAATSQALSGGKLVIDVS 77
           HA A +  + YC+K A+Y V++  VEI P+PV RG+P TF I A T + +  G L+ ++S
Sbjct: 26  HAQAESHSLKYCEKGANYAVQISNVEILPNPVVRGEPFTFKIKAYTGEPILSGDLIYEIS 85

Query: 78  YFGWHVYSET--HDLCGETPCPVSAGNFVIAHSQVLPGFTP 116
           + G         H L  ETP PV+ G+F++ H+++LP  TP
Sbjct: 86  FAGIEGQPAIFHHALSEETPLPVAPGHFLLTHTELLPPVTP 126