Miyakogusa Predicted Gene

Lj5g3v0816340.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0816340.1 Non Characterized Hit- tr|I1JGJ7|I1JGJ7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.43779
PE,78.54,0,E2F_TDP,Transcription factor E2F/dimerisation partner
(TDP); seg,NULL; TRANSCRIPTION FACTOR E2F,NULL,CUFF.53982.1
         (470 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g105110.1 | E2F transcription factor | HC | chr1:25000070-...   736   0.0  
Medtr4g052000.1 | E2F transcription factor | HC | chr4:18814210-...   480   e-135
Medtr3g113800.1 | E2F transcription factor | HC | chr3:53087588-...   234   2e-61
Medtr3g113800.2 | E2F transcription factor | HC | chr3:53087590-...   224   1e-58
Medtr4g106540.2 | E2F transcription factor-E2FE-like protein | H...    66   6e-11
Medtr4g106540.5 | E2F transcription factor-E2FE-like protein | H...    66   6e-11
Medtr4g106540.4 | E2F transcription factor-E2FE-like protein | H...    66   6e-11
Medtr4g106540.1 | E2F transcription factor-E2FE-like protein | H...    66   6e-11
Medtr4g106540.6 | E2F transcription factor-E2FE-like protein | H...    66   7e-11
Medtr4g106540.3 | E2F transcription factor-E2FE-like protein | H...    66   7e-11

>Medtr1g105110.1 | E2F transcription factor | HC |
           chr1:25000070-24993884 | 20130731
          Length = 463

 Score =  736 bits (1900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/471 (78%), Positives = 400/471 (84%), Gaps = 9/471 (1%)

Query: 1   MSSTAGASDNRATXXXXXXXXXXLKRHLAFASTKPPFAPPDDYHTFSAAATTAAGPDSRR 60
           MS+ AG SD  +           LKRHLAF STKPPFAP D+YHTF+A        DSR+
Sbjct: 1   MSANAGPSDRGSPMPTGAQIRPPLKRHLAFVSTKPPFAPTDEYHTFAAV-------DSRK 53

Query: 61  GAHHEPEAVVVRSPFIKRKNGMNNNEGDSQKWGNSPGGTNVMNSPFKTPVSAKGGRTHKL 120
            A H  EAV+VRSP IKRKNGMN +EGDSQK  NSPG  N MNSPFKTP+SAKGGR +K 
Sbjct: 54  VADHVNEAVIVRSPVIKRKNGMNESEGDSQKSSNSPG-YNAMNSPFKTPLSAKGGRANKS 112

Query: 121 KVSKEGRSCPPTPISNAGSPSPLTPANN-RYDSSLGLLTRKFINLIKHAEDGMLDLNKAA 179
           + SKEG+SCPPTPISNAGSPSPLTPA + RYDSSLGLLT+KFI+L+K AEDG+LDLNKAA
Sbjct: 113 RASKEGKSCPPTPISNAGSPSPLTPAGSCRYDSSLGLLTKKFIHLLKRAEDGILDLNKAA 172

Query: 180 ETLEVQKRRIYDITNVLEGIGLIEKKLKNRIHWKGIESSTPGAVDGDISMLKAETEKLSS 239
           ETL+VQKRRIYDITNVLEGIGLIEK +KNRI+WKGIESSTPG VDGDIS+LK+E + LS 
Sbjct: 173 ETLQVQKRRIYDITNVLEGIGLIEKNIKNRIYWKGIESSTPGNVDGDISLLKSEVDNLSL 232

Query: 240 EEQRLDDQIREMQEKLRSLSENENNQKCLFVTEEDIKAVPCFQNETLIAIKAPHGTTLEV 299
           EEQRLDDQIREMQE+LR LSE+ENNQK LFVTEEDIK +PCFQNETLIAIKAPHGTTLEV
Sbjct: 233 EEQRLDDQIREMQERLRGLSEDENNQKFLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEV 292

Query: 300 PDPEEAVDYPQRRYRIILRSTMGPIDVYLISQFEEKFEEINGAEPPISLPLASSSGSNEQ 359
           PDPEEAVD  QRRYRIILRSTMGPIDVYLISQFEEKFEEINGAEPP S PLASSS SNEQ
Sbjct: 293 PDPEEAVDELQRRYRIILRSTMGPIDVYLISQFEEKFEEINGAEPPASFPLASSSESNEQ 352

Query: 360 LVTETVPTEFSGIGLEPQAQLSSQGYSDLNASQEFAGGMMKIVPSDADNDSDYWLLSDAE 419
             TE VP E SG  LEPQA LSSQ YSDLN SQEFAGGMMKIVPSDADND+DYWLLSDAE
Sbjct: 353 QATEMVPAECSGKELEPQALLSSQTYSDLNVSQEFAGGMMKIVPSDADNDADYWLLSDAE 412

Query: 420 VSITDMWKTDASVDWNGVDMLHPDFGLVSRPQTPSSGFAEAPPTAANSNQR 470
           VSITDMW+TD++VDW+GVDMLHPDF ++SRPQTPS G AEAP T AN NQR
Sbjct: 413 VSITDMWRTDSNVDWSGVDMLHPDFEMLSRPQTPSPGLAEAPSTVANPNQR 463


>Medtr4g052000.1 | E2F transcription factor | HC |
           chr4:18814210-18820291 | 20130731
          Length = 460

 Score =  480 bits (1236), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 258/444 (58%), Positives = 311/444 (70%), Gaps = 17/444 (3%)

Query: 25  KRHLAFASTKPPFAPPDDYHTFSAAATTAAGPDSRRGAHHEPEAVVVRSPFIKRKNGMNN 84
           +R L F+S KPPF    DYH F+        PD RR    E EA+VV++P +KRK+   +
Sbjct: 19  QRQLPFSSMKPPFLAAADYHRFA--------PDHRRNQDLETEAIVVKTPQLKRKSEAAD 70

Query: 85  NEGDSQKWGNSPGGTNVMNSPFKTPVSAKGGRTHKL-KVSKEGRSCPPTPISNAGSPSP- 142
            E DS     +PG T   NS  +TPVS K G+  K  +++K  RS   TP SN GSPS  
Sbjct: 71  FEADSGDR-MTPGSTAAANSSVQTPVSGKAGKGGKSSRMTKCNRSGTQTPGSNIGSPSGN 129

Query: 143 -LTPAN-NRYDSSLGLLTRKFINLIKHAEDGMLDLNKAAETLEVQKRRIYDITNVLEGIG 200
            LTPA   RYDSSLGLLT+KFI LIK AEDG+LDLN AA+TLEVQKRRIYDITNV EGIG
Sbjct: 130 NLTPAGPCRYDSSLGLLTKKFIALIKQAEDGILDLNNAADTLEVQKRRIYDITNVFEGIG 189

Query: 201 LIEKKLKNRIHWKGIESSTPGAVDGDISMLKAETEKLSSEEQRLDDQIREMQEKLRSLSE 260
           LIEKKLKNRI WKG++ S PG  D   + L+AE E L+ EE+RLD+QIREMQE+LR+LSE
Sbjct: 190 LIEKKLKNRIQWKGLDVSKPGEADDSFASLQAEIENLTIEERRLDEQIREMQERLRNLSE 249

Query: 261 NENNQKCLFVTEEDIKAVPCFQNETLIAIKAPHGTTLEVPDPEEAVDYPQRRYRIILRST 320
           +ENN+K LFVTEEDIK +PCFQNETLIAIKAPHGTTLEVPDP+EAVDYPQRRYRI+LRST
Sbjct: 250 DENNEKFLFVTEEDIKNLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRST 309

Query: 321 MGPIDVYLISQFEEKFEEINGAEPPISLPLASSSGSNEQLVTETVPTEFSGIGLEPQAQL 380
           MGPIDVYL+SQFEEKFEEING +     P +       +  +  VP E  G  +E Q Q 
Sbjct: 310 MGPIDVYLVSQFEEKFEEINGVDVASKFPPSPEVNKVNKDQSTVVP-EDKGKEIEVQRQD 368

Query: 381 SSQGYSDLNASQEFAGGMMKIVPSDADNDSDYWLLSDAEVSITDMWKTDASVDWNGVDML 440
                SDLN + +F  G+MKIVPSD  +D+DYWLLSDA+VSITDMW+T+  V+WN ++ L
Sbjct: 369 GEGPSSDLNNNHDFVSGIMKIVPSDVASDADYWLLSDADVSITDMWRTEPGVEWNELEAL 428

Query: 441 HPDFGLVSRPQTP---SSGFAEAP 461
             ++ +     T    +S   E P
Sbjct: 429 QEEYCMAREQSTTPNHASNIGEVP 452


>Medtr3g113800.1 | E2F transcription factor | HC |
           chr3:53087588-53083226 | 20130731
          Length = 363

 Score =  234 bits (596), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 129/273 (47%), Positives = 174/273 (63%), Gaps = 23/273 (8%)

Query: 134 ISNAGSPSPLTPANNRYDSSLGLLTRKFINLIKHAEDGMLDLNKAAETLEVQKRRIYDIT 193
           ISN  S +  T   NRYDSSLGLLT+KFI+LI  A+DG LDLNK AE L+VQKRRIYDIT
Sbjct: 89  ISNTDSLNSATV--NRYDSSLGLLTKKFISLINEAKDGTLDLNKTAEILKVQKRRIYDIT 146

Query: 194 NVLEGIGLIEKKLKNRIHWKGIESSTPGAVDGDISMLKAETEKLSSEEQRLDDQIREMQE 253
           NVLEGIGLIEK  KN I WKG +   P  ++  ++ LK E + L +EE +LD  I E +E
Sbjct: 147 NVLEGIGLIEKTSKNHIRWKGCDGLEPRELEHQVNTLKDEVDSLYAEEFKLDQCISERKE 206

Query: 254 KLRSLSENENNQKCLFVTEEDIKAVPCFQNETLIAIKAPHGTTLEVPDPEEAVDYPQRRY 313
            +R+L E EN  K LF T+EDI  +PCFQN+ LI IKAP  + +EVPDP+E + + QR+Y
Sbjct: 207 LIRNLEEGENTGKYLFFTKEDILTLPCFQNKQLITIKAPKASFIEVPDPDEELGFHQRQY 266

Query: 314 RIILRSTMGPIDVYLISQFEEKFEEINGAEPPISLPLASSSGSNEQLVTETVPTEFSGIG 373
           R+I+RS  GPI++YL+++ + KFE ++  +  +  P  +S+G               G+G
Sbjct: 267 RMIVRSATGPINLYLLNKHDHKFEGVSAKQAKLEDPSRNSNGC-----------RMDGVG 315

Query: 374 LEPQAQLSSQGYS-----DLNASQEFAGGMMKI 401
           L     L +QG+       LN+    A G+ +I
Sbjct: 316 L-----LENQGFQKNPSGSLNSLDSEAFGIQQI 343


>Medtr3g113800.2 | E2F transcription factor | HC |
           chr3:53087590-53083246 | 20130731
          Length = 309

 Score =  224 bits (572), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 113/199 (56%), Positives = 143/199 (71%), Gaps = 2/199 (1%)

Query: 134 ISNAGSPSPLTPANNRYDSSLGLLTRKFINLIKHAEDGMLDLNKAAETLEVQKRRIYDIT 193
           ISN  S +  T   NRYDSSLGLLT+KFI+LI  A+DG LDLNK AE L+VQKRRIYDIT
Sbjct: 89  ISNTDSLNSATV--NRYDSSLGLLTKKFISLINEAKDGTLDLNKTAEILKVQKRRIYDIT 146

Query: 194 NVLEGIGLIEKKLKNRIHWKGIESSTPGAVDGDISMLKAETEKLSSEEQRLDDQIREMQE 253
           NVLEGIGLIEK  KN I WKG +   P  ++  ++ LK E + L +EE +LD  I E +E
Sbjct: 147 NVLEGIGLIEKTSKNHIRWKGCDGLEPRELEHQVNTLKDEVDSLYAEEFKLDQCISERKE 206

Query: 254 KLRSLSENENNQKCLFVTEEDIKAVPCFQNETLIAIKAPHGTTLEVPDPEEAVDYPQRRY 313
            +R+L E EN  K LF T+EDI  +PCFQN+ LI IKAP  + +EVPDP+E + + QR+Y
Sbjct: 207 LIRNLEEGENTGKYLFFTKEDILTLPCFQNKQLITIKAPKASFIEVPDPDEELGFHQRQY 266

Query: 314 RIILRSTMGPIDVYLISQF 332
           R+I+RS  GPI++YL+  F
Sbjct: 267 RMIVRSATGPINLYLLKYF 285


>Medtr4g106540.2 | E2F transcription factor-E2FE-like protein | HC |
           chr4:44194065-44191173 | 20130731
          Length = 364

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 44/68 (64%)

Query: 148 NRYDSSLGLLTRKFINLIKHAEDGMLDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLK 207
           +R   SLGLL   F++L    +  ++ L+ AA  L V++RRIYDI NVLE IG++ +K K
Sbjct: 16  DRKQKSLGLLCTNFLSLYNKDDVRLIGLDDAAAKLGVERRRIYDIVNVLESIGVLARKAK 75

Query: 208 NRIHWKGI 215
           N+  WKG 
Sbjct: 76  NQYTWKGF 83


>Medtr4g106540.5 | E2F transcription factor-E2FE-like protein | HC |
           chr4:44194316-44190574 | 20130731
          Length = 345

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 44/68 (64%)

Query: 148 NRYDSSLGLLTRKFINLIKHAEDGMLDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLK 207
           +R   SLGLL   F++L    +  ++ L+ AA  L V++RRIYDI NVLE IG++ +K K
Sbjct: 16  DRKQKSLGLLCTNFLSLYNKDDVRLIGLDDAAAKLGVERRRIYDIVNVLESIGVLARKAK 75

Query: 208 NRIHWKGI 215
           N+  WKG 
Sbjct: 76  NQYTWKGF 83


>Medtr4g106540.4 | E2F transcription factor-E2FE-like protein | HC |
           chr4:44194343-44190467 | 20130731
          Length = 358

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 44/68 (64%)

Query: 148 NRYDSSLGLLTRKFINLIKHAEDGMLDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLK 207
           +R   SLGLL   F++L    +  ++ L+ AA  L V++RRIYDI NVLE IG++ +K K
Sbjct: 16  DRKQKSLGLLCTNFLSLYNKDDVRLIGLDDAAAKLGVERRRIYDIVNVLESIGVLARKAK 75

Query: 208 NRIHWKGI 215
           N+  WKG 
Sbjct: 76  NQYTWKGF 83



 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 15/99 (15%)

Query: 136 NAGSPSPLTPANNRYDSSLGLLTRKFINLIKHAEDGMLDLNKAAE----------TLEVQ 185
           N  S  P +  N+R + SL LLT+ F+ L   +   M+ L+ AA           T+  +
Sbjct: 148 NPNSAFPRSLKNDRREKSLALLTQNFVKLFVCSNLEMISLDDAARLLLGDAYNSSTMRTK 207

Query: 186 KRRIYDITNVLEGIGLIEK-----KLKNRIHWKGIESST 219
            RR+YDI NVL  + LIEK       K    W G++  T
Sbjct: 208 VRRLYDIANVLTSMNLIEKTHTTDTRKPAFRWLGLKGKT 246


>Medtr4g106540.1 | E2F transcription factor-E2FE-like protein | HC |
           chr4:44194355-44190467 | 20130731
          Length = 358

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 44/68 (64%)

Query: 148 NRYDSSLGLLTRKFINLIKHAEDGMLDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLK 207
           +R   SLGLL   F++L    +  ++ L+ AA  L V++RRIYDI NVLE IG++ +K K
Sbjct: 16  DRKQKSLGLLCTNFLSLYNKDDVRLIGLDDAAAKLGVERRRIYDIVNVLESIGVLARKAK 75

Query: 208 NRIHWKGI 215
           N+  WKG 
Sbjct: 76  NQYTWKGF 83



 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 15/99 (15%)

Query: 136 NAGSPSPLTPANNRYDSSLGLLTRKFINLIKHAEDGMLDLNKAAE----------TLEVQ 185
           N  S  P +  N+R + SL LLT+ F+ L   +   M+ L+ AA           T+  +
Sbjct: 148 NPNSAFPRSLKNDRREKSLALLTQNFVKLFVCSNLEMISLDDAARLLLGDAYNSSTMRTK 207

Query: 186 KRRIYDITNVLEGIGLIEK-----KLKNRIHWKGIESST 219
            RR+YDI NVL  + LIEK       K    W G++  T
Sbjct: 208 VRRLYDIANVLTSMNLIEKTHTTDTRKPAFRWLGLKGKT 246


>Medtr4g106540.6 | E2F transcription factor-E2FE-like protein | HC |
           chr4:44194316-44190574 | 20130731
          Length = 339

 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 44/68 (64%)

Query: 148 NRYDSSLGLLTRKFINLIKHAEDGMLDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLK 207
           +R   SLGLL   F++L    +  ++ L+ AA  L V++RRIYDI NVLE IG++ +K K
Sbjct: 16  DRKQKSLGLLCTNFLSLYNKDDVRLIGLDDAAAKLGVERRRIYDIVNVLESIGVLARKAK 75

Query: 208 NRIHWKGI 215
           N+  WKG 
Sbjct: 76  NQYTWKGF 83



 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 15/99 (15%)

Query: 136 NAGSPSPLTPANNRYDSSLGLLTRKFINLIKHAEDGMLDLNKAAE----------TLEVQ 185
           N  S  P +  N+R + SL LLT+ F+ L   +   M+ L+ AA           T+  +
Sbjct: 148 NPNSAFPRSLKNDRREKSLALLTQNFVKLFVCSNLEMISLDDAARLLLGDAYNSSTMRTK 207

Query: 186 KRRIYDITNVLEGIGLIEK-----KLKNRIHWKGIESST 219
            RR+YDI NVL  + LIEK       K    W G++  T
Sbjct: 208 VRRLYDIANVLTSMNLIEKTHTTDTRKPAFRWLGLKGKT 246


>Medtr4g106540.3 | E2F transcription factor-E2FE-like protein | HC |
           chr4:44194429-44190467 | 20130731
          Length = 385

 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 44/68 (64%)

Query: 148 NRYDSSLGLLTRKFINLIKHAEDGMLDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLK 207
           +R   SLGLL   F++L    +  ++ L+ AA  L V++RRIYDI NVLE IG++ +K K
Sbjct: 16  DRKQKSLGLLCTNFLSLYNKDDVRLIGLDDAAAKLGVERRRIYDIVNVLESIGVLARKAK 75

Query: 208 NRIHWKGI 215
           N+  WKG 
Sbjct: 76  NQYTWKGF 83



 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 15/99 (15%)

Query: 136 NAGSPSPLTPANNRYDSSLGLLTRKFINLIKHAEDGMLDLNKAAE----------TLEVQ 185
           N  S  P +  N+R + SL LLT+ F+ L   +   M+ L+ AA           T+  +
Sbjct: 148 NPNSAFPRSLKNDRREKSLALLTQNFVKLFVCSNLEMISLDDAARLLLGDAYNSSTMRTK 207

Query: 186 KRRIYDITNVLEGIGLIEK-----KLKNRIHWKGIESST 219
            RR+YDI NVL  + LIEK       K    W G++  T
Sbjct: 208 VRRLYDIANVLTSMNLIEKTHTTDTRKPAFRWLGLKGKT 246