Miyakogusa Predicted Gene

Lj5g3v0804090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0804090.1 tr|Q46LP7|Q46LP7_PROMT Secreted pentapeptide
repeats protein (Precursor) OS=Prochlorococcus marinus
,39.62,4e-19,Pentapeptide,Pentapeptide repeat; UNCHARACTERIZED,NULL;
seg,NULL; Pentapeptide repeat-like,NULL,CUFF.53977.1
         (225 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g068150.1 | thylakoid lumenal 15 kDa protein | HC | chr3:3...   296   8e-81
Medtr5g012110.2 | thylakoid lumenal protein | HC | chr5:3585456-...    53   3e-07
Medtr5g012110.1 | thylakoid lumenal protein | HC | chr5:3585463-...    53   3e-07

>Medtr3g068150.1 | thylakoid lumenal 15 kDa protein | HC |
           chr3:30786153-30781995 | 20130731
          Length = 224

 Score =  296 bits (759), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 149/187 (79%), Positives = 160/187 (85%)

Query: 39  LGLNPKQSLKASQKLTFSLAESLPSAAIVALLSASFFFVDPALAFRGGGPYGQEVTRGQD 98
           LG NPKQ+ +ASQKL  SL ES+ SAA+VALLSAS FFVDPALAF+GGGPYGQ VTRGQD
Sbjct: 38  LGTNPKQNHQASQKLALSLGESVSSAALVALLSASLFFVDPALAFKGGGPYGQGVTRGQD 97

Query: 99  LSGKDFSGRTLIKQDFKTSILRQANFKGAKLLGASFFDSDLTGXXXXXXXXXXXXXXXXN 158
           LSGKDFSG+TLIKQDFKTSILRQANFKGAKLLGASFFD+DLTG                N
Sbjct: 98  LSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDTDLRSADFSLAN 157

Query: 159 VTKANLSNANLEGALATGNTSFKGSNITGADFTDVPLRDDQREYLCKVADGVNPTTGNAT 218
           VTK NLSNANLEGAL TGNTSFKGSNITGADFTDVPLR+DQRE+LCK+ADGVN TTGNAT
Sbjct: 158 VTKVNLSNANLEGALVTGNTSFKGSNITGADFTDVPLREDQREFLCKIADGVNSTTGNAT 217

Query: 219 RETLLCN 225
           R+TLLCN
Sbjct: 218 RDTLLCN 224


>Medtr5g012110.2 | thylakoid lumenal protein | HC |
           chr5:3585456-3583277 | 20130731
          Length = 232

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 14/126 (11%)

Query: 113 DFKTSILRQANFKGAKLLGASFFDSDLTGXXXXXXXXXXXXXXXXNVTKANLSN------ 166
           D K ++    NF+ A    A   +SD +G                N T A+LS+      
Sbjct: 67  DLKKTVHVNENFRRANFTSADMRESDFSGSTFNGAYMEKAVAFKANFTGADLSDTLMDRM 126

Query: 167 ----ANLEGALAT----GNTSFKGSNITGADFTDVPLRDDQREYLCKVADGVNPTTGNAT 218
               ANL  A+ +      +   G+ I GADF+D  L   Q+  LCK A G NP TG +T
Sbjct: 127 VLNEANLTNAILSRTVLTRSDLGGAIIEGADFSDAVLDLPQKLALCKYASGTNPVTGVST 186

Query: 219 RETLLC 224
           R +L C
Sbjct: 187 RVSLGC 192


>Medtr5g012110.1 | thylakoid lumenal protein | HC |
           chr5:3585463-3583273 | 20130731
          Length = 262

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 14/126 (11%)

Query: 113 DFKTSILRQANFKGAKLLGASFFDSDLTGXXXXXXXXXXXXXXXXNVTKANLSN------ 166
           D K ++    NF+ A    A   +SD +G                N T A+LS+      
Sbjct: 97  DLKKTVHVNENFRRANFTSADMRESDFSGSTFNGAYMEKAVAFKANFTGADLSDTLMDRM 156

Query: 167 ----ANLEGALAT----GNTSFKGSNITGADFTDVPLRDDQREYLCKVADGVNPTTGNAT 218
               ANL  A+ +      +   G+ I GADF+D  L   Q+  LCK A G NP TG +T
Sbjct: 157 VLNEANLTNAILSRTVLTRSDLGGAIIEGADFSDAVLDLPQKLALCKYASGTNPVTGVST 216

Query: 219 RETLLC 224
           R +L C
Sbjct: 217 RVSLGC 222