Miyakogusa Predicted Gene

Lj5g3v0792910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0792910.1 Non Characterized Hit- tr|C6TEZ3|C6TEZ3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6723
PE=,90.62,0,Vps5,Vps5 C-terminal; PX,Phox homologous domain; no
description,Phox homologous domain; coiled-coil,,CUFF.53972.1
         (405 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g059650.1 | sorting nexin 2B | HC | chr1:25932034-25939222...   716   0.0  
Medtr5g073280.1 | sorting nexin 2B | HC | chr5:31210033-31203698...   110   2e-24
Medtr5g083370.1 | sorting nexin 2B | HC | chr5:35999184-36004201...    97   3e-20

>Medtr1g059650.1 | sorting nexin 2B | HC | chr1:25932034-25939222 |
           20130731
          Length = 404

 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/373 (93%), Positives = 366/373 (98%), Gaps = 1/373 (0%)

Query: 33  TDPVKLGNGVQSYISYRVITKTNFPEYQGPEKIVIRRYSDFIWLRDRLFEKYKGIFIPPL 92
           TDPVKLGNGVQ+YISYRVITKTNF EYQGPEKIVIRRYSDF+WLRDRLFEK+KGIFIPPL
Sbjct: 33  TDPVKLGNGVQAYISYRVITKTNFTEYQGPEKIVIRRYSDFVWLRDRLFEKFKGIFIPPL 92

Query: 93  PEKSAVEKFRFSAEFIEMRRQALDIFVNRIASHHELQQSEDLRVFLQAEEETMERLRSHE 152
           PEKSAVEKFRFSAEFIEMRRQALD+FVNRIASHHEL+QSEDLR FLQAEEETMERLRSHE
Sbjct: 93  PEKSAVEKFRFSAEFIEMRRQALDVFVNRIASHHELRQSEDLRTFLQAEEETMERLRSHE 152

Query: 153 TGIFKKKPADLVQIFKDVQSKVSDVVLGKEKPVEESNPEYEKLKHYIFELENHLAEAQKH 212
           TGIFKK P+DL+QIFKDVQS+VSDVVLGKEKPVEES+ EYEKLKHYIFELENHLAEAQKH
Sbjct: 153 TGIFKK-PSDLMQIFKDVQSRVSDVVLGKEKPVEESDAEYEKLKHYIFELENHLAEAQKH 211

Query: 213 AYRLVKRHRELGQSLADFGKAVKLLGASEGNALGKAFSELGIKSEILSAKLQKEAQQLLM 272
           AYRLVKRHRELGQSL+DFGKAVKLLGASEGNALGKAFSELG+KSEILS KLQ EA QLL+
Sbjct: 212 AYRLVKRHRELGQSLSDFGKAVKLLGASEGNALGKAFSELGMKSEILSVKLQNEAHQLLL 271

Query: 273 DFEEPLKDYVRAVQSIKATIAERANAFRRQCELAETMKLKEINLDKLMLIRSDRVAEAER 332
           +FEEPLKDYVRAVQSIKATIAERANAFRRQCELAETMKLKEINLDKLMLIRS++VAEAER
Sbjct: 272 NFEEPLKDYVRAVQSIKATIAERANAFRRQCELAETMKLKEINLDKLMLIRSEKVAEAER 331

Query: 333 EYNELKAESEQATKTFETIVKLMNEEIGRFQEQKTLDMGIAFHEFAKGQARLANGIAEAW 392
           EY+ELKAESEQATKTFETIVKLM+EEIGRFQEQKTLDMGIAFHEFAKGQARLANGIA+AW
Sbjct: 332 EYHELKAESEQATKTFETIVKLMSEEIGRFQEQKTLDMGIAFHEFAKGQARLANGIADAW 391

Query: 393 RSLLPKLEACSSS 405
           RSLLPKLEACSSS
Sbjct: 392 RSLLPKLEACSSS 404


>Medtr5g073280.1 | sorting nexin 2B | HC | chr5:31210033-31203698 |
           20130731
          Length = 565

 Score =  110 bits (276), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 148/292 (50%), Gaps = 33/292 (11%)

Query: 41  GVQSYISYRVITKTNFPEYQGPEKIVIRRYSDFIWLRDRLFEKYKGIFIPPLPEKSAVE- 99
           G  SY++Y + T+TN  E+ G E  V RR+ D + L DRL E Y+G FIPP P+KS VE 
Sbjct: 156 GSNSYVTYLITTRTNLQEFGGNEFGVRRRFKDVVTLSDRLSEAYRGFFIPPRPDKSIVES 215

Query: 100 KFRFSAEFIEMRRQALDIFVNRIASHHELQQSEDLRVFLQAE--------EETMERLRSH 151
           +     EF+E RR +L+ ++ R+A H  +++S++ RVFLQ +         +   R+   
Sbjct: 216 QVMQKQEFVEQRRVSLEKYLRRLADHPVIRKSDEFRVFLQVQGKLPLVGSTDVASRVLDG 275

Query: 152 ETGIFKK-------------KPA----DLVQIFKDVQSKVSDVVLGKEKPVEESNPEYEK 194
              + K+             +PA    DL+++FK+++  +++   G +  V E + E+  
Sbjct: 276 AVKLPKQLMGESVIAPSEVVQPAKGGRDLLRLFKELKQSMANDWGGSKPLVVEEDKEFLA 335

Query: 195 LKHYIFELENHLAEAQKHAYRLVKRHRELGQSLADFGKA-VKLLGASEGNALG-----KA 248
            K  + ELE  +  A + A  LVK  +++G+++ + G A +KL       A+      +A
Sbjct: 336 KKERVHELEQQINGASQQAESLVKAQQDMGETMGELGLAFIKLTKFENEEAVSESQRVRA 395

Query: 249 FSELGIKSEILSA-KLQKEAQQLLMDFEEPLKDYVRAVQSIKATIAERANAF 299
               G+ +  + A +L +E     +   + L +Y+  + ++ +   +R NA 
Sbjct: 396 TDMKGVATAAVKASRLFRELNSQTVKHLDTLHEYLGLMLAVHSAFTDRTNAL 447


>Medtr5g083370.1 | sorting nexin 2B | HC | chr5:35999184-36004201 |
           20130731
          Length = 516

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 189/410 (46%), Gaps = 52/410 (12%)

Query: 41  GVQSYISYRVITKTNFPEYQGPEKIVIRRYSDFIWLRDRLFEKYKGIFIPPLPEKSAVE- 99
           G  SY +Y + T+T   EY      V RR+ + + L +RL E Y+G  IP  PEKS+VE 
Sbjct: 110 GGSSYHTYLITTRTGKSEYG-----VRRRFREVVTLSERLSEVYRGYVIPVRPEKSSVER 164

Query: 100 KFRFSAEFIEMRRQALDIFVNRIASHHELQQSEDLRVFLQAEEE-----TME-------- 146
           K     EF+E RR AL+ ++ ++  H  + +SE+LRVFLQ + +     T +        
Sbjct: 165 KVMQKEEFVEQRRLALEKYLRKLGLHPVIGKSEELRVFLQVQGKLPLMRTTDVASRMLDG 224

Query: 147 ------RLRSHETGIFK----KKPA----DLVQIFKDVQSKVSDVVLGKEKPVEESNPEY 192
                 +L   E+G+       +PA    DL++IFK+++  VS+   G +  V E + E+
Sbjct: 225 AVRLPRQLFGAESGVVDLNDVAQPAKSGRDLLRIFKELKQSVSNDWGGAKPLVVEEDKEF 284

Query: 193 EKLKHYIFELENHLAEAQKHAYRLVKRHRELGQSLADFGKA-VKLL------GASEGNAL 245
            + K  + E E  L+   + A  LVK  +++G+++ + G A VKL          E   +
Sbjct: 285 MEKKDKLMEFEQQLSNVSQQAESLVKFQQDMGETMGELGLAFVKLTKFETEEAEFESQRV 344

Query: 246 GKAFSELGIKSEILSAKLQKEAQQLLMDFEEPLKDYVRAVQSIKATIAERANAFRRQCEL 305
             A  +    + + +++L +E     +   + L +Y+  + +I    A+R++A      L
Sbjct: 345 RAADMKNVATAAVKASRLYRELNTQTIKHLDKLHEYLGTMLAINNAFADRSSALLTVQTL 404

Query: 306 AETMKLKEINLDKLMLIRSDRVAEAE----REYNELK-----AESEQ--ATKTFETIVKL 354
           +  +      ++KL  + S R+   +    R+  ELK      ES +  A + +E I + 
Sbjct: 405 SSELASLHSRIEKLE-VASSRIFGGDKSRMRKIEELKEAVRVTESAKICADREYERIKEN 463

Query: 355 MNEEIGRFQEQKTLDMGIAFHEFAKGQARLANGIAEAWRSLLPKLEACSS 404
              E+ R  +++  D       F   QA  A  +A  W  L  +    SS
Sbjct: 464 NRSELERIDKERQSDFQNMLRGFVVNQAGYAEKMAAVWEKLAEETSTYSS 513