Miyakogusa Predicted Gene

Lj5g3v0712220.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0712220.1 Non Characterized Hit- tr|I1I599|I1I599_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,43.08,2e-18,seg,NULL; Myb_DNA-bind_4,NULL; MYB_LIKE,Myb-like
domain; FAMILY NOT NAMED,NULL,CUFF.53853.1
         (454 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g060990.1 | trihelix transcription factor | HC | chr1:2659...   375   e-104
Medtr1g492790.1 | trihelix transcription factor | HC | chr1:4160...   175   7e-44
Medtr6g035370.1 | myb/SANT-like DNA-binding domain protein | HC ...   130   2e-30
Medtr1g098900.1 | trihelix transcription factor GT-like protein ...   130   2e-30
Medtr1g098870.1 | myb/SANT-like DNA-binding domain protein | HC ...   120   4e-27
Medtr2g026725.1 | Myb/SANT-like DNA-binding domain protein | HC ...    73   6e-13
Medtr7g114860.1 | Myb/SANT-like DNA-binding domain protein | HC ...    71   2e-12
Medtr1g081180.1 | trihelix transcription factor | HC | chr1:3612...    63   7e-10
Medtr7g068770.1 | trihelix transcription factor GT-3a, putative ...    57   4e-08
Medtr5g026540.1 | trihelix transcription factor GT-3a-like prote...    50   3e-06
Medtr4g015680.1 | trihelix transcription factor GT-3a-like prote...    49   1e-05

>Medtr1g060990.1 | trihelix transcription factor | HC |
           chr1:26597350-26600596 | 20130731
          Length = 511

 Score =  375 bits (962), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 235/496 (47%), Positives = 264/496 (53%), Gaps = 74/496 (14%)

Query: 20  DLRNLVNLPIRPTHFPSVPPHPTAELFPGHRNLTPVPTPXXXXXXXXXXXXYEMMMLMPR 79
           DLR LVN   R THFPS+P   T E F GHRNLT + T             YEMMML  R
Sbjct: 27  DLRQLVN-GTRSTHFPSIPTAATDEFFSGHRNLTALLTTTHPQTHQNQ---YEMMML-GR 81

Query: 80  GV--HDFXXXXXXXXXXXXXXXXXXXXXXXXXXGFDAETAACFGGDASTGRWPRQETLTL 137
           GV   DF                              ET    GGDASTGRWPRQETLTL
Sbjct: 82  GVVLEDFNSITTHVPPPPSTTITTATTTASASV-STPETTGYMGGDASTGRWPRQETLTL 140

Query: 138 LEVRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKA 197
           LE+RSRLDPKFKEANQKGPLWDEVSRIMSEEH YQRSGKKCREKFENLYKYYKKTKEGKA
Sbjct: 141 LEIRSRLDPKFKEANQKGPLWDEVSRIMSEEHAYQRSGKKCREKFENLYKYYKKTKEGKA 200

Query: 198 GRHDGKHYRFYRQLEALYGENSTNTA-GSTLHFQTNQEMFQTHQN--NKHCDTSTSL-TN 253
           GRHDGKHYRF+RQLEALYGENS  T+   T     N   FQ   N  N H D S SL TN
Sbjct: 201 GRHDGKHYRFFRQLEALYGENSNQTSLPETNFVNNNNFHFQQTSNSQNPHNDHSLSLTTN 260

Query: 254 STXXXXXXXXXXXXXXXXXXXXCMXXXXXXXXXWKVKIKEFIDLQVKKLVEKQEEWMDKI 313
           ST                               WKVKIK+FID Q+KKLVEKQEEW+ K+
Sbjct: 261 STDFEIDTSSSDDGNDVKGKRKS-----SGRRSWKVKIKDFIDAQMKKLVEKQEEWLSKL 315

Query: 314 VKTMXXXXXXXXXXXXXXXXXXXXXXXXXXXFWAKERAWIEARDAALMEALQNVTGSSFP 373
           VKT+                           FW+ ERAWIEARDAALMEAL+N+ G    
Sbjct: 316 VKTLEDKEKERALREEEWRKQEAKRVEKEQKFWSNERAWIEARDAALMEALKNLGGREMV 375

Query: 374 -------------------YNNNNDHQSCLHN--QGSNYC-------------------- 392
                               N N D    L++  +GS+ C                    
Sbjct: 376 KVEEAHDHKGVNVITGAEIQNQNEDGSEILNSTVRGSDNCTPRDDSKEGNRKRKESFYFN 435

Query: 393 ---------------DINDQRKENVGKAQTSDGSSPSNFNVGNVAPNDSCNFPFLMSEGG 437
                          D+NDQR+E V   +   GSSPS+ NVGNVA  D+C FPF++SEGG
Sbjct: 436 NNEQCSMYNQGSGYCDVNDQREEIVKLQRNDHGSSPSDSNVGNVANGDTC-FPFMISEGG 494

Query: 438 NWWDSYGLKLSKANQN 453
           N W+++GLK++K NQN
Sbjct: 495 NLWENFGLKINKVNQN 510


>Medtr1g492790.1 | trihelix transcription factor | HC |
           chr1:41606848-41604357 | 20130731
          Length = 501

 Score =  175 bits (444), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 85/125 (68%), Positives = 97/125 (77%), Gaps = 11/125 (8%)

Query: 114 AETAACFG-----------GDASTGRWPRQETLTLLEVRSRLDPKFKEANQKGPLWDEVS 162
           A TA C G            D+   RWPRQETL+LLE+RSRLD KF+E NQK PLW+E+S
Sbjct: 89  ASTAFCVGLETSDKGWLGNFDSCNNRWPRQETLSLLEIRSRLDSKFRENNQKAPLWNEIS 148

Query: 163 RIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRHDGKHYRFYRQLEALYGENSTNT 222
           RIM+EE GYQRSGKKC+EKFENLYKYYKKTKEGKA R DGKHYRF+RQLEA+ GE +TN+
Sbjct: 149 RIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASRQDGKHYRFFRQLEAICGEPNTNS 208

Query: 223 AGSTL 227
             STL
Sbjct: 209 HASTL 213


>Medtr6g035370.1 | myb/SANT-like DNA-binding domain protein | HC |
           chr6:12680552-12684213 | 20130731
          Length = 646

 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 61/96 (63%), Positives = 78/96 (81%), Gaps = 5/96 (5%)

Query: 119 CFGGDASTGRWPRQETLTLLEVRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKC 178
            FGG+    RWPRQETL LL++RS +D  FK+A+ KGPLWDEVSR M++  GYQR+ KKC
Sbjct: 50  SFGGN----RWPRQETLALLKIRSDMDGAFKDASVKGPLWDEVSRKMAD-LGYQRNSKKC 104

Query: 179 REKFENLYKYYKKTKEGKAGRHDGKHYRFYRQLEAL 214
           +EKFEN+YKY+K+TKEG+ G+ DGK YRF+ QL+AL
Sbjct: 105 KEKFENVYKYHKRTKEGRGGKSDGKTYRFFDQLQAL 140



 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 65/93 (69%), Gaps = 2/93 (2%)

Query: 124 ASTGRWPRQETLTLLEVRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFE 183
           AS+ RWP+ E   L+++R+ LD K++E   KGPLW+E+S +M ++ GY R+ K+C+EK+E
Sbjct: 460 ASSSRWPKTEVEALIKLRTTLDMKYQENGPKGPLWEEISGLM-KKMGYNRNAKRCKEKWE 518

Query: 184 NLYKYYKKTKEGKAGR-HDGKHYRFYRQLEALY 215
           N+ KY+KK KE    R  D K   ++ QL+ALY
Sbjct: 519 NINKYFKKVKESNKKRPEDSKTCPYFHQLDALY 551


>Medtr1g098900.1 | trihelix transcription factor GT-like protein |
           HC | chr1:44556038-44552430 | 20130731
          Length = 637

 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/104 (59%), Positives = 78/104 (75%), Gaps = 3/104 (2%)

Query: 113 DAETAACFGGDASTG--RWPRQETLTLLEVRSRLDPKFKEANQKGPLWDEVSRIMSEEHG 170
           D E      G+ S G  RWPRQETL LL +RS +D  F++A+ KGPLWDEVSR ++E  G
Sbjct: 40  DVERGRVEDGERSFGGNRWPRQETLALLRIRSDMDTVFRDASVKGPLWDEVSRKLAE-LG 98

Query: 171 YQRSGKKCREKFENLYKYYKKTKEGKAGRHDGKHYRFYRQLEAL 214
           Y RS KKC+EKFEN+YKY+K+TK+G+ G+ DGK YRF+ QLEAL
Sbjct: 99  YHRSSKKCKEKFENVYKYHKRTKDGRGGKSDGKTYRFFDQLEAL 142



 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 44/100 (44%), Positives = 64/100 (64%), Gaps = 2/100 (2%)

Query: 119 CFGGDASTGRWPRQETLTLLEVRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKC 178
            F G  S+ RWP+ E   L+ +R+ +D K++E   KGPLW+E+S  M +  GY R+ K+C
Sbjct: 445 TFMGGMSSSRWPKVEVQALINLRTSMDNKYQENGPKGPLWEEISLAM-KNLGYNRNAKRC 503

Query: 179 REKFENLYKYYKKTKEGKAGR-HDGKHYRFYRQLEALYGE 217
           +EK+EN+ KY+KK KE    R  D K   ++ QL+ALY E
Sbjct: 504 KEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYKE 543


>Medtr1g098870.1 | myb/SANT-like DNA-binding domain protein | HC |
           chr1:44531156-44535019 | 20130731
          Length = 565

 Score =  120 bits (300), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 53/87 (60%), Positives = 74/87 (85%), Gaps = 1/87 (1%)

Query: 128 RWPRQETLTLLEVRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYK 187
           RWPRQETL LL++RS +D  F++++ KGPLW+EVSR +++  GY RS KKC+EKFEN+YK
Sbjct: 55  RWPRQETLALLKIRSDMDGVFRDSSLKGPLWEEVSRKLAD-LGYHRSSKKCKEKFENVYK 113

Query: 188 YYKKTKEGKAGRHDGKHYRFYRQLEAL 214
           Y+K+TKEG++G+ +GK YRF+ QL+AL
Sbjct: 114 YHKRTKEGRSGKSEGKTYRFFDQLQAL 140



 Score = 89.4 bits (220), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 2/98 (2%)

Query: 121 GGDASTGRWPRQETLTLLEVRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCRE 180
           G   S  RWP+ E   L+ +R+ L+PK++E   K PLW+++S  M +  GY R+ K+C+E
Sbjct: 365 GASPSPSRWPKSEVHALIRIRTSLEPKYQENGPKAPLWEDISAAM-KRQGYNRNAKRCKE 423

Query: 181 KFENLYKYYKKTKEG-KAGRHDGKHYRFYRQLEALYGE 217
           K+EN+ KYYKK KE  K  R D K   ++ +LEA+Y E
Sbjct: 424 KWENINKYYKKMKESNKQRRDDSKTCPYFNELEAIYKE 461


>Medtr2g026725.1 | Myb/SANT-like DNA-binding domain protein | HC |
           chr2:9734426-9736828 | 20130731
          Length = 379

 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 2/111 (1%)

Query: 123 DASTGRWPRQETLTLLEVRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKF 182
           D S  RWP  E   L+ VR+ L+ KF     KG +W+E++  + +  GY RS KKC+EK+
Sbjct: 257 DPSNNRWPDVEVQALIAVRTALEHKFGHMGSKGSIWEEIAGAL-QGMGYNRSAKKCKEKW 315

Query: 183 ENLYKYYKKT-KEGKAGRHDGKHYRFYRQLEALYGENSTNTAGSTLHFQTN 232
           EN+ KYY++T   GK    + K   ++ +L+ LY   S    G+ L    N
Sbjct: 316 ENINKYYRRTVGSGKKRPVNSKTCPYFDELDNLYRNGSLERNGNALSSTNN 366


>Medtr7g114860.1 | Myb/SANT-like DNA-binding domain protein | HC |
           chr7:47421508-47423164 | 20130731
          Length = 483

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 11/100 (11%)

Query: 128 RWPRQETLTLLEVRS------RLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREK 181
           RWPR E L L+ ++S      R +   +  + KGPLW+ +S  M E  GY+RS K+C+EK
Sbjct: 381 RWPRDEVLALINLKSTTSVINRSNNNVEGNSNKGPLWERISEGMFE-LGYKRSAKRCKEK 439

Query: 182 FENLYKYYKKTKE----GKAGRHDGKHYRFYRQLEALYGE 217
           +EN+ KY+KKTK+     K    D +   ++ QL +LY +
Sbjct: 440 WENINKYFKKTKDIVVNKKKRSMDSRTCPYFHQLSSLYNQ 479


>Medtr1g081180.1 | trihelix transcription factor | HC |
           chr1:36129455-36127007 | 20130731
          Length = 557

 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 4/93 (4%)

Query: 128 RWPRQETLTLLEVR--SRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENL 185
           RWP+ E L L+ +R  +  + K   +N K PLW+ +S+ M E  GY+RS K+C+EK+EN+
Sbjct: 418 RWPKDEVLALINLRCNNNNEEKEGNSNNKAPLWERISQGMLE-LGYKRSAKRCKEKWENI 476

Query: 186 YKYYKKTKEGKAGRH-DGKHYRFYRQLEALYGE 217
            KY++KTK+    R  D +   ++  L  LY +
Sbjct: 477 NKYFRKTKDANRKRSLDSRTCPYFHLLTNLYNQ 509


>Medtr7g068770.1 | trihelix transcription factor GT-3a, putative |
           HC | chr7:25258075-25259867 | 20130731
          Length = 293

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 6/91 (6%)

Query: 128 RWPRQETLTLLEVRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYK 187
           +W  QET   L +RS LD  F E  +   LW+ +S  M E+ GY RS ++C+ K++NL  
Sbjct: 52  QWSIQETKEFLMIRSELDQTFMETKRNKQLWEVISNTMKEK-GYHRSAEQCKCKWKNLVT 110

Query: 188 YYK--KTKEGKAGRHDGKHYRFYRQLEALYG 216
            YK  +T E +A R     + FY +L+A++ 
Sbjct: 111 RYKGCETMEVEAMRQ---QFPFYNELQAIFS 138


>Medtr5g026540.1 | trihelix transcription factor GT-3a-like protein
           | HC | chr5:10916605-10913848 | 20130731
          Length = 302

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 3/103 (2%)

Query: 129 WPRQETLTLLEVRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKY 188
           W +QET   + +R+ L+  F  + +   LW+ VS  M  E GY+RS ++C+ K++NL   
Sbjct: 46  WSQQETREFIAIRAELERDFTASKRNKTLWEVVSSKM-RERGYRRSPEQCKCKWKNLVNR 104

Query: 189 YKKTKEGKAGRHDGKHYRFYRQLEALYGENSTNTAGSTLHFQT 231
           Y K KE     H GK   F+ +L A++ E + +     L  +T
Sbjct: 105 Y-KGKETSDPEH-GKQCPFFEELHAVFTERAHSMQRLLLESET 145


>Medtr4g015680.1 | trihelix transcription factor GT-3a-like protein
           | HC | chr4:4726525-4724373 | 20130731
          Length = 279

 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 6/90 (6%)

Query: 128 RWPRQETLTLLEVRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYK 187
           +W  QET   L +R+ LD  F E  +   LW+ +S  M E+ GY RS ++C+ K++NL  
Sbjct: 41  QWSIQETNEFLLIRAELDQTFMETKRNKQLWEVISNHMKEK-GYHRSAEQCKCKWKNLVT 99

Query: 188 YYK--KTKEGKAGRHDGKHYRFYRQLEALY 215
            YK  +T E +  +     + FY +L+ ++
Sbjct: 100 RYKGCETMETEVLKQ---QFPFYNELQTIF 126