Miyakogusa Predicted Gene

Lj5g3v0705390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0705390.1 tr|A7UQU8|A7UQU8_MEDTR Homeodomain-like;
Uridylate kinase OS=Medicago truncatula GN=MTR_1g061600 PE=,93.31,0,no
description,Aspartate/glutamate/uridylate kinase; seg,NULL;
AA_kinase,Aspartate/glutamate/uridyla,CUFF.53796.1
         (360 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g061600.1 | aspartate/glutamate/uridylate kinase family pr...   683   0.0  
Medtr8g093330.1 | uridylate kinase | HC | chr8:38963406-38967599...   215   7e-56
Medtr4g079960.2 | sequence-specific DNA-binding transcription fa...    74   3e-13
Medtr2g016140.1 | transcription factor | HC | chr2:4875032-48740...    74   3e-13
Medtr4g079960.3 | sequence-specific DNA-binding transcription fa...    74   3e-13
Medtr4g079960.1 | sequence-specific DNA-binding transcription fa...    73   3e-13
Medtr2g016140.2 | transcription factor | HC | chr2:4875032-48709...    73   4e-13
Medtr5g017500.1 | Myb/SANT-like DNA-binding domain protein | HC ...    70   4e-12
Medtr6g486270.2 | Myb/SANT-like DNA-binding domain protein | HC ...    68   2e-11
Medtr6g486270.1 | Myb/SANT-like DNA-binding domain protein | HC ...    68   2e-11
Medtr4g117990.1 | transcription factor | HC | chr4:48969471-4897...    64   3e-10
Medtr3g014280.1 | transcription factor | HC | chr3:4028479-40314...    59   5e-09
Medtr1g037650.1 | Myb/SANT-like DNA-binding domain protein | HC ...    59   7e-09
Medtr2g092960.1 | Myb/SANT-like DNA-binding domain protein | LC ...    57   3e-08
Medtr7g081190.1 | Myb/SANT-like DNA-binding domain protein | HC ...    55   1e-07
Medtr8g022290.1 | transcription factor | HC | chr8:7894420-78924...    51   2e-06

>Medtr1g061600.1 | aspartate/glutamate/uridylate kinase family
           protein, putative | HC | chr1:26896287-26891384 |
           20130731
          Length = 512

 Score =  683 bits (1763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/360 (90%), Positives = 340/360 (94%)

Query: 1   MCLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVEQCKNKVDNLKKRYKLER 60
           +CLLEAYTEKFTQLNRGNLRGRDWEEVA++VSERCENQSKSVEQCKNKVDNLKKRYKLER
Sbjct: 139 VCLLEAYTEKFTQLNRGNLRGRDWEEVASMVSERCENQSKSVEQCKNKVDNLKKRYKLER 198

Query: 61  HRMNNGCISSSHWPWFKQMEHIVGNSLPTKFSDEDKALVPASNSPRQSKRYGVATPSSGG 120
           HRMNNGCIS+SHWPWFKQMEHIVGNSLP KF+D+DKA+VPAS SPRQSKRYGVAT SSGG
Sbjct: 199 HRMNNGCISASHWPWFKQMEHIVGNSLPAKFADDDKAIVPASISPRQSKRYGVATSSSGG 258

Query: 121 QVNSMKSKALSNLRWRRVVLKISGAALTGSDTCNLDPKVAMLVSSEVAIASRLGVEVVIV 180
           QVNS+KSKALSNLRWRRVVLKISG+ALTGSDTCN+DPKVAMLVS+EVAIASRLGVEV IV
Sbjct: 259 QVNSLKSKALSNLRWRRVVLKISGSALTGSDTCNIDPKVAMLVSNEVAIASRLGVEVAIV 318

Query: 181 VGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSLAMQEF 240
           VGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNS+LLQSTLEKMGVQTRVQTS++MQ F
Sbjct: 319 VGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSLLLQSTLEKMGVQTRVQTSVSMQAF 378

Query: 241 AEPYNRQRAIRHLEKXXXXXXXXXXXXXXNPLFSTDIAAALRASELNAQAVLKGTNVDGV 300
           AEPYNRQRAIRHLEK              NPLFSTDI+AALRASE+NAQAVLKGTNVDGV
Sbjct: 379 AEPYNRQRAIRHLEKGRVVIFGGIGFGAGNPLFSTDISAALRASEINAQAVLKGTNVDGV 438

Query: 301 YDCNSRDNNFTFEHISFRELASRGVTSMDMSALTFCEENAIPVVVFNLLAPGNISKALCG 360
           YDCNSRDNNFTFEHISFREL SRGVTSMDMSALTFCEENAIPVVVFNLLAPGNISKALCG
Sbjct: 439 YDCNSRDNNFTFEHISFRELVSRGVTSMDMSALTFCEENAIPVVVFNLLAPGNISKALCG 498


>Medtr8g093330.1 | uridylate kinase | HC | chr8:38963406-38967599 |
           20130731
          Length = 321

 Score =  215 bits (547), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 114/251 (45%), Positives = 160/251 (63%), Gaps = 13/251 (5%)

Query: 117 SSGGQVNSMKSKALS-----NLRWRRVVLKISGAALTGSDTCNLDPKVAMLVSSEVAIAS 171
           S   ++ SM   ALS       +WRRV+LK+SG AL G    N+DPKV M ++ EVA  +
Sbjct: 59  SRNSEIPSMSPFALSMNESSKPKWRRVLLKVSGEALAGDQAQNIDPKVTMSIAREVAAVT 118

Query: 172 RLGVEVVIVVGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRV 231
           R G          N F G +W  ++GL+R +A  +GM+ATVMN+I LQ+T+E +G+ TRV
Sbjct: 119 RHGCTSC---WWGNIFRGASWAGSSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRV 175

Query: 232 QTSLAMQEFAEPYNRQRAIRHLEKXXXXXXXXXXXXXXNPLFSTDIAAALRASELNAQAV 291
           QT+  M E AEPY R+RA+RHLEK              NP F+TD AAALR +E+NA+ V
Sbjct: 176 QTAFRMSEVAEPYIRRRAVRHLEK---GRVVIFAAGTGNPFFTTDTAAALRCAEINAEVV 232

Query: 292 LKGTNVDGVYDCNSRDNNFT--FEHISFRELASRGVTSMDMSALTFCEENAIPVVVFNLL 349
           LK TNVDGV+D + + N      + ++++++  + ++ MD++A+T C+EN IPVVVFNL 
Sbjct: 233 LKATNVDGVFDDDPKRNPQARLLDTLTYQDVIKKDLSVMDLTAITLCQENNIPVVVFNLN 292

Query: 350 APGNISKALCG 360
            PGNI KA+ G
Sbjct: 293 KPGNIEKAIKG 303


>Medtr4g079960.2 | sequence-specific DNA-binding transcription
           factors protein, putative | HC | chr4:30958270-30954949
           | 20130731
          Length = 304

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 62/95 (65%), Gaps = 7/95 (7%)

Query: 2   CLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVE----QCKNKVDNLKKRYK 57
            L++A+ E++  LNRGNLR + W+EVA  V++     ++       QCKN++D LKK+YK
Sbjct: 38  TLIDAWGERYLDLNRGNLRQKTWQEVADAVNDFHAAGNRKARRTDVQCKNRIDTLKKKYK 97

Query: 58  LERHRM--NNGCISSSHWPWFKQMEHIVGNSLPTK 90
           +E+ R+  ++G   S  WP+F +++ ++G++ P K
Sbjct: 98  IEKARVSESDGGYQSP-WPFFTRLDVLIGDTFPVK 131


>Medtr2g016140.1 | transcription factor | HC | chr2:4875032-4874034
           | 20130731
          Length = 332

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 65/94 (69%), Gaps = 6/94 (6%)

Query: 2   CLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSE---RCENQSKSVEQCKNKVDNLKKRYKL 58
            L++A+  ++ +LNRGNLR +DW++VA  V+      +   ++  QCKN++D +KK+YK+
Sbjct: 30  TLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKV 89

Query: 59  ERHRM--NNGCISSSHWPWFKQMEHIVGNSLPTK 90
           E+ R+  +NG + S+ WP+F++++ ++G +  +K
Sbjct: 90  EKARVTESNGVLHSN-WPFFERLDVLIGPNFSSK 122


>Medtr4g079960.3 | sequence-specific DNA-binding transcription
           factors protein, putative | HC | chr4:30958242-30955342
           | 20130731
          Length = 315

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 62/95 (65%), Gaps = 7/95 (7%)

Query: 2   CLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVE----QCKNKVDNLKKRYK 57
            L++A+ E++  LNRGNLR + W+EVA  V++     ++       QCKN++D LKK+YK
Sbjct: 38  TLIDAWGERYLDLNRGNLRQKTWQEVADAVNDFHAAGNRKARRTDVQCKNRIDTLKKKYK 97

Query: 58  LERHRM--NNGCISSSHWPWFKQMEHIVGNSLPTK 90
           +E+ R+  ++G   S  WP+F +++ ++G++ P K
Sbjct: 98  IEKARVSESDGGYQSP-WPFFTRLDVLIGDTFPVK 131


>Medtr4g079960.1 | sequence-specific DNA-binding transcription
           factors protein, putative | HC | chr4:30958199-30957118
           | 20130731
          Length = 313

 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 62/95 (65%), Gaps = 7/95 (7%)

Query: 2   CLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVE----QCKNKVDNLKKRYK 57
            L++A+ E++  LNRGNLR + W+EVA  V++     ++       QCKN++D LKK+YK
Sbjct: 38  TLIDAWGERYLDLNRGNLRQKTWQEVADAVNDFHAAGNRKARRTDVQCKNRIDTLKKKYK 97

Query: 58  LERHRM--NNGCISSSHWPWFKQMEHIVGNSLPTK 90
           +E+ R+  ++G   S  WP+F +++ ++G++ P K
Sbjct: 98  IEKARVSESDGGYQSP-WPFFTRLDVLIGDTFPVK 131


>Medtr2g016140.2 | transcription factor | HC | chr2:4875032-4870933
           | 20130731
          Length = 317

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 65/94 (69%), Gaps = 6/94 (6%)

Query: 2   CLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSE---RCENQSKSVEQCKNKVDNLKKRYKL 58
            L++A+  ++ +LNRGNLR +DW++VA  V+      +   ++  QCKN++D +KK+YK+
Sbjct: 30  TLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKV 89

Query: 59  ERHRM--NNGCISSSHWPWFKQMEHIVGNSLPTK 90
           E+ R+  +NG + S+ WP+F++++ ++G +  +K
Sbjct: 90  EKARVTESNGVLHSN-WPFFERLDVLIGPNFSSK 122


>Medtr5g017500.1 | Myb/SANT-like DNA-binding domain protein | HC |
           chr5:6397265-6398575 | 20130731
          Length = 229

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 6/92 (6%)

Query: 3   LLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERC----ENQSKSVEQCKNKVDNLKKRYKL 58
           L+ AY +K+  L RG LRG  WEEVA VV+ RC     + SK+  QC++K++ L++R++ 
Sbjct: 30  LIRAYQDKWYSLKRGPLRGSQWEEVAVVVAARCGYDYNHPSKTALQCRHKMEKLRQRHRS 89

Query: 59  ERHRM--NNGCISSSHWPWFKQMEHIVGNSLP 88
           E+ R+   +   SS  W +F+ M+ +    LP
Sbjct: 90  EKRRLTATSSVASSRSWQYFRLMDDLERGPLP 121


>Medtr6g486270.2 | Myb/SANT-like DNA-binding domain protein | HC |
           chr6:32354773-32355885 | 20130731
          Length = 370

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 60/93 (64%), Gaps = 3/93 (3%)

Query: 1   MCLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVEQCKNKVDNLKKRYKLER 60
             LLE + EKF Q+ R +LR  +W +VA  VSE  + + ++V QC++ +D +K+RYK E+
Sbjct: 136 FVLLEIWGEKFLQIGRNSLRSEEWHDVAEKVSEELKVE-RNVAQCRSVLDKVKRRYKKEK 194

Query: 61  HRMNNG--CISSSHWPWFKQMEHIVGNSLPTKF 91
            RM+     +SS  WP+FK+M+ ++ +S   ++
Sbjct: 195 SRMDEMGLGLSSCKWPFFKKMDMLMSSSARQEY 227


>Medtr6g486270.1 | Myb/SANT-like DNA-binding domain protein | HC |
           chr6:32354773-32355885 | 20130731
          Length = 370

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 60/93 (64%), Gaps = 3/93 (3%)

Query: 1   MCLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVEQCKNKVDNLKKRYKLER 60
             LLE + EKF Q+ R +LR  +W +VA  VSE  + + ++V QC++ +D +K+RYK E+
Sbjct: 136 FVLLEIWGEKFLQIGRNSLRSEEWHDVAEKVSEELKVE-RNVAQCRSVLDKVKRRYKKEK 194

Query: 61  HRMNNG--CISSSHWPWFKQMEHIVGNSLPTKF 91
            RM+     +SS  WP+FK+M+ ++ +S   ++
Sbjct: 195 SRMDEMGLGLSSCKWPFFKKMDMLMSSSARQEY 227


>Medtr4g117990.1 | transcription factor | HC |
           chr4:48969471-48970716 | 20130731
          Length = 340

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 4/94 (4%)

Query: 1   MCLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCEN--QSKSVEQCKNKVDNLKKRYKL 58
           + L+++Y EK+  L RGNL+   W+EVA  VS RC N   +K+  QC++K++ L+KRY+ 
Sbjct: 50  LALIDSYREKWYSLGRGNLKATHWQEVADSVSNRCPNVTPAKTPVQCRHKMEKLRKRYRT 109

Query: 59  ERHRMNNGCIS--SSHWPWFKQMEHIVGNSLPTK 90
           E  R  +   S  +S W  FK M+ +     P K
Sbjct: 110 EIQRARSLPHSRFNSAWVHFKLMDSMEKGPSPVK 143


>Medtr3g014280.1 | transcription factor | HC | chr3:4028479-4031484
           | 20130731
          Length = 325

 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 9/82 (10%)

Query: 2   CLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVE---QCKNKVDNLKKRYKL 58
            LLEAY  K+   NR  L+G+DWE+VA  VS R  N +KS +   QCKNK++++KKRY  
Sbjct: 45  TLLEAYESKWVLRNRAKLKGQDWEDVAKHVSSRS-NSTKSPKTQTQCKNKIESMKKRY-- 101

Query: 59  ERHRMNNGCISSSHWPWFKQME 80
              R  +     S WP + +++
Sbjct: 102 ---RSESASSDVSSWPLYSRLD 120


>Medtr1g037650.1 | Myb/SANT-like DNA-binding domain protein | HC |
           chr1:13960642-13959736 | 20130731
          Length = 189

 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 9/82 (10%)

Query: 2   CLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVE---QCKNKVDNLKKRYKL 58
            LLEAY  K+   NR  L+G+DWE+VA  VS R  N +KS +   QCKNK++++KKRY  
Sbjct: 45  TLLEAYESKWVLRNRAKLKGQDWEDVAKHVSSRS-NSTKSPKTQTQCKNKIESMKKRY-- 101

Query: 59  ERHRMNNGCISSSHWPWFKQME 80
              R  +     S WP + +++
Sbjct: 102 ---RSESASSDVSSWPLYSRLD 120


>Medtr2g092960.1 | Myb/SANT-like DNA-binding domain protein | LC |
           chr2:39569693-39563388 | 20130731
          Length = 1223

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 53/93 (56%), Gaps = 3/93 (3%)

Query: 1   MCLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSER---CENQSKSVEQCKNKVDNLKKRYK 57
             L++A+ +    LNR  LR   W+E+A  +++       + ++   CKN+ + LKK+Y 
Sbjct: 52  FTLIDAWGKLSKTLNRKYLRQYHWKEIAKTINDHHGYSRKERRTYVHCKNRFEALKKKYA 111

Query: 58  LERHRMNNGCISSSHWPWFKQMEHIVGNSLPTK 90
           +E+ R++   +    W +F++++ ++G+ LP K
Sbjct: 112 IEKARVSENELYDDEWLFFEKLDSVLGDGLPAK 144


>Medtr7g081190.1 | Myb/SANT-like DNA-binding domain protein | HC |
           chr7:30965503-30963216 | 20130731
          Length = 388

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 7/88 (7%)

Query: 2   CLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQS---KSVEQCKNKVDNLKKRYKL 58
            L+++Y +K+  L R NL+   W+EVA  V+ RC N S   K+  QC++K++ L+KRY+ 
Sbjct: 53  ALIDSYRDKWYSLGRTNLKATHWQEVADAVAVRCPNSSPVAKTAVQCRHKMEKLRKRYRS 112

Query: 59  ERHRMNNGCIS----SSHWPWFKQMEHI 82
           E  ++ +  +     SS W  FK M+ +
Sbjct: 113 EIQKLRSLPVPRSRSSSSWVLFKAMDSM 140


>Medtr8g022290.1 | transcription factor | HC | chr8:7894420-7892470
           | 20130731
          Length = 371

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 61/89 (68%), Gaps = 6/89 (6%)

Query: 2   CLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCE--NQSKSVEQCKNKVDNLKKRYKLE 59
            L+EA+ E++ +L+RGNL+ + W+EVA +V+ R +     K+  QCKN++D +KK+YK E
Sbjct: 75  VLIEAWGERYLELSRGNLKQKHWKEVAEIVNGRGDYLKAPKTDVQCKNRIDTVKKKYKSE 134

Query: 60  RHRM----NNGCISSSHWPWFKQMEHIVG 84
           + ++     +G +++S W ++ +++ ++G
Sbjct: 135 KAKIGAGGGSGGVTTSTWRFYDRLDQLIG 163