Miyakogusa Predicted Gene

Lj5g3v0658280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0658280.1 Non Characterized Hit- tr|A9NZ45|A9NZ45_PICSI
Putative uncharacterized protein OS=Picea sitchensis P,45.45,4e-18,
,CUFF.53639.1
         (99 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g063360.1 | hypothetical protein | HC | chr1:27966681-2796...   152   8e-38

>Medtr1g063360.1 | hypothetical protein | HC |
          chr1:27966681-27964417 | 20130731
          Length = 100

 Score =  152 bits (383), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 69/99 (69%), Positives = 79/99 (79%), Gaps = 1/99 (1%)

Query: 1  MEKYFGNAYRGDPGVPHADPERFVTIWIGAAAFSVLTYINPYMWQL-SNQYNWHDKAMLF 59
          M+KYF +AYRGDPGVPHADP RFV IW G  AF+    INPY W + S+ +NWHD+ MLF
Sbjct: 1  MDKYFSSAYRGDPGVPHADPHRFVNIWFGCLAFTASNCINPYYWHIGSSSFNWHDRVMLF 60

Query: 60 EQYHWKKAMKKNEPYEFQWNKRWDKDHRDSYYFNWPAYF 98
          EQYHWKKAM+KN+ YEF WNK WD+ HRDSYYFNWP YF
Sbjct: 61 EQYHWKKAMRKNQRYEFNWNKTWDRAHRDSYYFNWPIYF 99