Miyakogusa Predicted Gene

Lj5g3v0656970.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0656970.1 Non Characterized Hit- tr|I1JPP8|I1JPP8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.12154
PE,90.91,0,tRNA-synt_His,NULL; HGTP_anticodon,Anticodon-binding; no
description,NULL; no description,Anticodon-,gene.g59558.t1.1
         (313 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g101940.1 | histidyl-tRNA synthetase | HC | chr7:41153175-...   458   e-129
Medtr1g057860.1 | histidyl-tRNA synthetase | HC | chr1:25470664-...    67   3e-11
Medtr1g057880.1 | histidine-tRNA ligase | HC | chr1:25476222-254...    52   1e-06
Medtr5g091860.1 | histidine-tRNA ligase | LC | chr5:40087568-400...    49   9e-06

>Medtr7g101940.1 | histidyl-tRNA synthetase | HC |
           chr7:41153175-41162265 | 20130731
          Length = 501

 Score =  458 bits (1178), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/286 (80%), Positives = 244/286 (85%)

Query: 28  AEAELISSIVTLFKRIGITESDVGFKVSSRKVLQEVLRCYSIPENLFGKVCXXXXXXXXX 87
           AEAELISSIV+ FKRIGITESDVGFKVSSRKVLQEVL+CYSIPEN+FGKVC         
Sbjct: 216 AEAELISSIVSFFKRIGITESDVGFKVSSRKVLQEVLKCYSIPENMFGKVCVIIDKIEKI 275

Query: 88  XXXXXXXXLKAAGLSQEAVLELLQVLSVKSLTELEERLGNSGEAIADLKELFSLAEKFGY 147
                   LKA GLSQEAV ELLQVLSVKSLTELEERLG SGEAIADLK+LFSLAEKFGY
Sbjct: 276 PVDEIKKELKALGLSQEAVQELLQVLSVKSLTELEERLGGSGEAIADLKQLFSLAEKFGY 335

Query: 148 SKWLQFDASVVRGLAYYTGIVFEGFDRQGKLRAICGGGRYDHLFSTFGADDVAACGFGFG 207
           SKWLQ DASVVRGLAYYTGIVFEGFDR+GKLRAICGGGRYDHLFSTFGADD+ ACGFGFG
Sbjct: 336 SKWLQLDASVVRGLAYYTGIVFEGFDREGKLRAICGGGRYDHLFSTFGADDIPACGFGFG 395

Query: 208 DAXXXXXXXXXXXXXXXSMQIDDIVCALDEDLQGYAALVANILREKGQSVDLVLESKPLK 267
           DA               S+Q+ +IVCALDE+LQG AA+ ANILREKGQSVDLVLESKPLK
Sbjct: 396 DAVIVELLREKGLLPELSLQVHNIVCALDEELQGCAAMAANILREKGQSVDLVLESKPLK 455

Query: 268 WVFKRAARTNAERLVLVGNSEWQKGVVGVKILSTGEQYEVKLDDLK 313
           WVFKRAARTNAERLVLVGNSEWQ+G+V VKILSTGEQYEVKLDDLK
Sbjct: 456 WVFKRAARTNAERLVLVGNSEWQRGMVRVKILSTGEQYEVKLDDLK 501


>Medtr1g057860.1 | histidyl-tRNA synthetase | HC |
           chr1:25470664-25459007 | 20130731
          Length = 868

 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 128/295 (43%), Gaps = 20/295 (6%)

Query: 31  ELISSIVTLFKRIGITESDVGFKVSSRKVLQEVLRCYSIPENLFGKVCXXXXXXXXXXXX 90
           E++  +  L   + I + +V  K++ RK+L  +++   +P   F  +C            
Sbjct: 563 EVVRILTELLDELNIGDFEV--KLNHRKLLDGMMQICGVPPEKFRTICSSIDKLDKQSFE 620

Query: 91  XXXXXL-KAAGLSQEAVLELLQVLSVKS-----LTELEER----LGNSG--EAIADLKEL 138
                + +  GL+ E    +   +  K      L++L++     L N+G  +A+ DL+ L
Sbjct: 621 QIRKEMVEEKGLTAETADRIGTFVKEKGHPLTLLSKLKQEGSAFLENAGSVDALNDLEIL 680

Query: 139 FSLAEKFGYSKWLQFDASVVRGLAYYTGIVFEGFDRQG-KLRAICGGGRYDHLFSTFGAD 197
           F   +K      + FD S+ RGL YYTG++FE   + G ++ +I  GGRYD+L   FG+ 
Sbjct: 681 FRALDKSKRLDKVVFDLSLARGLDYYTGVIFEAVFKGGAQVGSIAAGGRYDNLIGMFGSK 740

Query: 198 DVAACGFGFGDA---XXXXXXXXXXXXXXXSMQIDDIVCALDEDLQGYAALVANILREKG 254
            V A G   G                      + + +V  L  D+     L   +     
Sbjct: 741 QVPAVGVSLGIERVFAIMEQQQKDQNQMARPTKTEVLVSILGNDVTLAGELAGELWDAGV 800

Query: 255 QSVDLVLESKPLKWVFKRAARTNAERLVLVGNSEWQKGVVGVKILSTGEQYEVKL 309
           ++  LV + +P  + + + +R     ++LVG  E ++G V +K L +G    + +
Sbjct: 801 KAEFLVNKRRPKHFDYAKESRI--PWMILVGEQEIKEGTVQLKSLESGNDVNINI 853


>Medtr1g057880.1 | histidine-tRNA ligase | HC |
           chr1:25476222-25474368 | 20130731
          Length = 128

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 153 FDASVVRGLAYYTGIVFEGFDRQG-KLRAICGGGRYDHLFSTFGADDVAACGFGFG 207
           FD S+ RGL YYTG++FE   + G ++ +I  GGRYD+L   FG+    A G   G
Sbjct: 49  FDLSLARGLDYYTGVIFEAVFKGGVEVGSIAAGGRYDNLIGMFGSKQGPAVGVSLG 104


>Medtr5g091860.1 | histidine-tRNA ligase | LC |
           chr5:40087568-40086835 | 20130731
          Length = 173

 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 125 LGNSG--EAIADLKELFSLAEKFGYSKWLQFDASVVRGLAYYTGIVFEGFDRQG-KLRAI 181
           L N+G  +A+ DL+ LF   +       + FD S+ RGL YYTG++FE   + G ++ +I
Sbjct: 51  LENAGSVDALNDLEILFKALDNSNRLDKVVFDLSLARGLDYYTGVIFEAVFKGGAQVGSI 110

Query: 182 CGGGRYDHLFSTF 194
             GGRYD+L   F
Sbjct: 111 AAGGRYDNLIGMF 123