Miyakogusa Predicted Gene

Lj5g3v0641390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0641390.1 Non Characterized Hit- tr|G6FW75|G6FW75_9CYAN
Putative uncharacterized protein OS=Fischerella sp.
JS,47.9,1e-17,seg,NULL; DUF4079,Protein of unknown function
DUF4079,CUFF.53594.1
         (118 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g063070.1 | transmembrane protein, putative | HC | chr1:27...   188   1e-48

>Medtr1g063070.1 | transmembrane protein, putative | HC |
           chr1:27725724-27723071 | 20130731
          Length = 238

 Score =  188 bits (477), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 94/118 (79%), Positives = 101/118 (85%)

Query: 1   MGGYGTYLGFRIRYSDDVEEKAKAKDLHPKXXXXXXXXXXXXXXXXVTSLLTSDKPIFES 60
           MGGYGTYLGFRIR+SDDVEEKAKAKDLHPK                VTSLLT+DKPIF+S
Sbjct: 121 MGGYGTYLGFRIRFSDDVEEKAKAKDLHPKLLAGMFFFFALGATGGVTSLLTTDKPIFDS 180

Query: 61  PHAVTGAIGLALLTVQTILPTLFEGNPGLRSVHGILGSSIMTLFLIHAALGLQLGLSS 118
           PHAVTG IGLALLT+QTILP+LFEGNPGLR+VHGILGSSIMTLFL+HAALGLQLGLSS
Sbjct: 181 PHAVTGVIGLALLTIQTILPSLFEGNPGLRNVHGILGSSIMTLFLVHAALGLQLGLSS 238