Miyakogusa Predicted Gene

Lj5g3v0626910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0626910.1 Non Characterized Hit- tr|I1L8V1|I1L8V1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82,0,ZF_RING_2,Zinc
finger, RING-type; RING/U-box,NULL; Ring finger,Zinc finger,
RING-type; no descriptio,CUFF.53569.1
         (349 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g064680.1 | E3 ubiquitin-protein ligase | HC | chr1:284641...   484   e-137
Medtr7g101150.1 | E3 ubiquitin-protein ligase, putative | HC | c...   421   e-118
Medtr7g101150.2 | E3 ubiquitin-protein ligase, putative | HC | c...   372   e-103
Medtr4g117250.1 | zinc finger, C3HC4 type (RING finger) protein ...   271   5e-73
Medtr2g022210.1 | zinc finger, C3HC4 type (RING finger) protein ...   268   5e-72
Medtr2g437720.1 | zinc finger, C3HC4 type (RING finger) protein ...    50   4e-06

>Medtr1g064680.1 | E3 ubiquitin-protein ligase | HC |
           chr1:28464133-28468044 | 20130731
          Length = 350

 Score =  484 bits (1246), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 242/318 (76%), Positives = 260/318 (81%), Gaps = 6/318 (1%)

Query: 37  EIAANRFVYPAAAXXXXXXXXXXXXXXXXXXXXXXXXXDHHHRPPMDPMWGCYQAPLP-P 95
           E A NRFVYPAAA                         DHHHR  MDP+   YQ  +P P
Sbjct: 34  EAAGNRFVYPAAAPPYHNYPNYYPPPPGTVPMPLPAPYDHHHRQAMDPISWRYQQQVPAP 93

Query: 96  APYVEQREAVTIKNDVNVKKETLKIVPDEENPGHFLVSFTFDATVSGSVTVLFFAKEGEG 155
           APYVE ++AVTIKNDVN+KKETL I PDEENPG FLV+FTFDATVSGS+TVLFFAKEG+G
Sbjct: 94  APYVEHQKAVTIKNDVNIKKETLMIEPDEENPGSFLVTFTFDATVSGSITVLFFAKEGDG 153

Query: 156 CILTPMKENVLPPVTVNFQQGLGQKFRQPAGTGIKFSEFDEAELLKVGDMDVYPVAVKAD 215
           C+LT  KENVL PVT+NFQQGLGQKFRQPAGTGI FS F+E+ELLKV DMD+YPVAVKAD
Sbjct: 154 CVLTSTKENVLAPVTINFQQGLGQKFRQPAGTGINFSMFEESELLKVADMDIYPVAVKAD 213

Query: 216 ASSGDHDGSEETPASGN----TNSQITQAVFEKEKGEFRVKVVKQILWVNGMRYELQEIY 271
           ASS D +GS ETP SGN     NSQITQAVFEKEKGEFR+KV KQILWVNGMRYELQEIY
Sbjct: 214 ASSSDVEGSNETPISGNKTNTNNSQITQAVFEKEKGEFRLKVAKQILWVNGMRYELQEIY 273

Query: 272 GIGNSMESDLDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQP 331
           GIG S+ESDLDGNDPGKECVICLSEPR+TTVLPCRHMCMCSGCAKVLRFQTNRCPICRQP
Sbjct: 274 GIGTSVESDLDGNDPGKECVICLSEPRNTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQP 333

Query: 332 VERLLEIKVRPEPTEPEE 349
           VERLLEIKV PEP EPE+
Sbjct: 334 VERLLEIKVGPEP-EPEQ 350


>Medtr7g101150.1 | E3 ubiquitin-protein ligase, putative | HC |
           chr7:40818341-40812981 | 20130731
          Length = 352

 Score =  421 bits (1081), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 207/267 (77%), Positives = 225/267 (84%), Gaps = 5/267 (1%)

Query: 82  MDPMWGCYQAPL-----PPAPYVEQREAVTIKNDVNVKKETLKIVPDEENPGHFLVSFTF 136
           MDP W     P       PAP+VE ++AVTI+NDVN+KKET+ I PDEENPG FLVSFTF
Sbjct: 85  MDPAWVSRYYPCGPVVNQPAPFVEHQKAVTIRNDVNIKKETIVISPDEENPGFFLVSFTF 144

Query: 137 DATVSGSVTVLFFAKEGEGCILTPMKENVLPPVTVNFQQGLGQKFRQPAGTGIKFSEFDE 196
           DA VSGS+T+ FFAKE EGCILTP KE  L PVTV FQQGLGQKFRQ AGTGI FS F+E
Sbjct: 145 DAAVSGSITIFFFAKEDEGCILTPTKETHLAPVTVQFQQGLGQKFRQQAGTGINFSMFEE 204

Query: 197 AELLKVGDMDVYPVAVKADASSGDHDGSEETPASGNTNSQITQAVFEKEKGEFRVKVVKQ 256
           ++L+KVGD+DVYP+AVKADASS +HDGS ET  S   NSQITQAVFEKEKGEFRVKVVKQ
Sbjct: 205 SDLVKVGDVDVYPLAVKADASSDNHDGSNETETSSKPNSQITQAVFEKEKGEFRVKVVKQ 264

Query: 257 ILWVNGMRYELQEIYGIGNSMESDLDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAK 316
           IL VNGMRYELQEIYGIGNS+ESD+D N+ GKECVICLSEPRDT V PCRHMCMCSGCAK
Sbjct: 265 ILSVNGMRYELQEIYGIGNSVESDVDDNEQGKECVICLSEPRDTIVHPCRHMCMCSGCAK 324

Query: 317 VLRFQTNRCPICRQPVERLLEIKVRPE 343
           VLRFQTNRCPICRQPVERLLEIKV  E
Sbjct: 325 VLRFQTNRCPICRQPVERLLEIKVGTE 351


>Medtr7g101150.2 | E3 ubiquitin-protein ligase, putative | HC |
           chr7:40818051-40813135 | 20130731
          Length = 328

 Score =  372 bits (955), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/267 (71%), Positives = 203/267 (76%), Gaps = 29/267 (10%)

Query: 82  MDPMWGCYQAPL-----PPAPYVEQREAVTIKNDVNVKKETLKIVPDEENPGHFLVSFTF 136
           MDP W     P       PAP+VE ++AVTI+NDVN+KKET+ I PDEENPG FLVSFTF
Sbjct: 85  MDPAWVSRYYPCGPVVNQPAPFVEHQKAVTIRNDVNIKKETIVISPDEENPGFFLVSFTF 144

Query: 137 DATVSGSVTVLFFAKEGEGCILTPMKENVLPPVTVNFQQGLGQKFRQPAGTGIKFSEFDE 196
           DA VSGS+T+ FFAKE EGCILTP KE  L PVTV FQQGLGQKFRQ AGT         
Sbjct: 145 DAAVSGSITIFFFAKEDEGCILTPTKETHLAPVTVQFQQGLGQKFRQQAGT--------- 195

Query: 197 AELLKVGDMDVYPVAVKADASSGDHDGSEETPASGNTNSQITQAVFEKEKGEFRVKVVKQ 256
                          VKADASS +HDGS ET  S   NSQITQAVFEKEKGEFRVKVVKQ
Sbjct: 196 ---------------VKADASSDNHDGSNETETSSKPNSQITQAVFEKEKGEFRVKVVKQ 240

Query: 257 ILWVNGMRYELQEIYGIGNSMESDLDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAK 316
           IL VNGMRYELQEIYGIGNS+ESD+D N+ GKECVICLSEPRDT V PCRHMCMCSGCAK
Sbjct: 241 ILSVNGMRYELQEIYGIGNSVESDVDDNEQGKECVICLSEPRDTIVHPCRHMCMCSGCAK 300

Query: 317 VLRFQTNRCPICRQPVERLLEIKVRPE 343
           VLRFQTNRCPICRQPVERLLEIKV  E
Sbjct: 301 VLRFQTNRCPICRQPVERLLEIKVGTE 327


>Medtr4g117250.1 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr4:48587547-48585269 | 20130731
          Length = 358

 Score =  271 bits (694), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 132/265 (49%), Positives = 177/265 (66%), Gaps = 5/265 (1%)

Query: 81  PMDPMWGCYQAPLPPAPYVEQREAVTIKNDVNVKKETLKIVPDEENPGHFLVSFTFDATV 140
           P+D      QA  PP PY +   A  ++NDVN+ K TL++  D  NP H L+SF FDA  
Sbjct: 89  PLDIDVNVVQALPPPPPYTDHETAKKVRNDVNLHKHTLQLYQDPNNPDHHLISFVFDALF 148

Query: 141 SGSVTVLFFAKEGEG-CILTPMKENVLPPVTVNFQQGLGQKFRQPAGTGIKFSEFDEAEL 199
            G +T+ + A+E E  C   P+      P+T  FQ+G+GQKF QP+GTGI    FD  +L
Sbjct: 149 PGRITIFYIAREEEHQCRFVPLFPEAFEPITFPFQKGVGQKFCQPSGTGIDLGFFDLDDL 208

Query: 200 LKVG-DMDVYPVAVKADASS-GDHDGSEETPASGNTNSQITQAVFEK--EKGEFRVKVVK 255
                + D++P+ + A+++   DHD    + A  + + QITQAV EK  + G F+VKVV+
Sbjct: 209 SNPSPEEDIFPLVICAESTPLQDHDTPVSSLADASPHMQITQAVLEKNSDTGSFQVKVVR 268

Query: 256 QILWVNGMRYELQEIYGIGNSMESDLDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCA 315
           QILW++ +RYEL+E+YGIGNS   D D NDPGKECVIC++EP+DT VLPCRHMCMC  CA
Sbjct: 269 QILWIDQVRYELRELYGIGNSTAPDFDRNDPGKECVICMTEPKDTAVLPCRHMCMCGECA 328

Query: 316 KVLRFQTNRCPICRQPVERLLEIKV 340
           K LR Q+N CPICRQP+E+L+EIK+
Sbjct: 329 KALRVQSNNCPICRQPIEQLIEIKI 353


>Medtr2g022210.1 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr2:7631733-7637979 | 20130731
          Length = 386

 Score =  268 bits (685), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 130/257 (50%), Positives = 180/257 (70%), Gaps = 11/257 (4%)

Query: 95  PAPYVEQREAVTIKNDVNVKKETLKIVPDEENPGHFLVSFTFDATVSGSVTVLFFAKEGE 154
           P PYV+ + A  I+N+VNV K+TL++  D+ NP H+LVSF FDA   GS+TV +FAKE +
Sbjct: 127 PPPYVDHQTAKKIRNNVNVHKDTLRLEVDQHNPDHYLVSFVFDAVFDGSITVFYFAKEED 186

Query: 155 GCILTPMKENVLPPVTVNFQQGLGQKFRQPAGTGIKFSEFDEAELLKVG-DMDVYPVAVK 213
            C   P+  +   PV V F++G+GQKF QP+GTGI    F+  +L K     DV+P+ + 
Sbjct: 187 KCRFVPLFPDAFVPVKVPFKKGVGQKFAQPSGTGIDLGFFELDDLSKPSPGEDVFPLVIC 246

Query: 214 ADASSGDHDGSEETPAS-------GNTNSQITQAVFEKEKG--EFRVKVVKQILWVNGMR 264
           A+ +  +     ETP +        + + QITQAV EK  G   F++KVV+QILW++G+R
Sbjct: 247 AE-TCLETPSENETPKTPDDSVLDASPHMQITQAVLEKSNGGGAFQIKVVRQILWIDGVR 305

Query: 265 YELQEIYGIGNSMESDLDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNR 324
           YEL+E+YGIG+S  +  D +DPGKECVIC++EP+DT VLPCRHMC+CS CAK LR Q+N+
Sbjct: 306 YELRELYGIGSSEAAGFDDSDPGKECVICMTEPKDTAVLPCRHMCLCSECAKALRLQSNK 365

Query: 325 CPICRQPVERLLEIKVR 341
           CPICRQP+E L+EI+V+
Sbjct: 366 CPICRQPIEELMEIRVK 382


>Medtr2g437720.1 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr2:14865351-14860695 | 20130731
          Length = 915

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)

Query: 284 NDPGKE--CVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEI 338
           N  GK+  C IC     D+ +  C HMC C  CA  LR+   +CPICR  ++ ++ +
Sbjct: 855 NKTGKKGNCCICNEMKVDSVLYRCGHMCACLKCANDLRWNNGKCPICRANIDDVVRV 911